RNA–Protein interactions for RNA: ENST00000269209.6

GAREM1-201, Transcript of GRB2 associated regulator of MAPK1 subtype 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAREM1, Length 3,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM1-201ENST00000269209 RAPGEF6Q8TEU7 1601 aa14.35□□□□□ -0.11
GAREM1-201ENST00000269209 TCOF1Q13428 1488 aaKnown RBP14.34□□□□□ -0.11
GAREM1-201ENST00000269209 L3MBTL2Q969R5 705 aa14.34□□□□□ -0.11
GAREM1-201ENST00000269209 DAPK1P53355 1430 aa14.34□□□□□ -0.11
GAREM1-201ENST00000269209 ABCC5O15440 1437 aa14.33□□□□□ -0.12
GAREM1-201ENST00000269209 ZNF326Q5BKZ1 582 aaKnown RBP14.33□□□□□ -0.12
GAREM1-201ENST00000269209 ANP32CO43423 234 aa14.32□□□□□ -0.12
GAREM1-201ENST00000269209 CNGB1Q14028 1251 aaPredicted RBP14.31□□□□□ -0.12
GAREM1-201ENST00000269209 TROQ12816 1431 aaPredicted RBP14.31□□□□□ -0.12
GAREM1-201ENST00000269209 DENND4BO75064 1496 aaPredicted RBP14.31□□□□□ -0.12
GAREM1-201ENST00000269209 HSPA5P11021 654 aaKnown RBP14.29□□□□□ -0.12
GAREM1-201ENST00000269209 NUP160Q12769 1436 aa14.28□□□□□ -0.12
GAREM1-201ENST00000269209 HNRNPMP52272 730 aaKnown RBP eCLIP14.28□□□□□ -0.12
GAREM1-201ENST00000269209 KIF14Q15058 1648 aa14.27□□□□□ -0.12
GAREM1-201ENST00000269209 GPATCH8Q9UKJ3 1502 aaKnown RBP14.26□□□□□ -0.13
GAREM1-201ENST00000269209 CAMSAP2Q08AD1 1489 aa14.26□□□□□ -0.13
GAREM1-201ENST00000269209 POLR3GLQ9BT43 218 aa14.25□□□□□ -0.13
GAREM1-201ENST00000269209 PTPRGP23470 1445 aa14.25□□□□□ -0.13
GAREM1-201ENST00000269209 EIF4G2P78344 907 aaKnown RBP eCLIP14.24□□□□□ -0.13
GAREM1-201ENST00000269209 NBPF8Q3BBV2 869 aa14.24□□□□□ -0.13
GAREM1-201ENST00000269209 PKD2Q13563 968 aa14.23□□□□□ -0.13
GAREM1-201ENST00000269209 TSPY4P0CV99 314 aa14.23□□□□□ -0.13
GAREM1-201ENST00000269209 TSPY10P0CW01 314 aa14.23□□□□□ -0.13
GAREM1-201ENST00000269209 ATP10BO94823 1461 aa14.23□□□□□ -0.13
GAREM1-201ENST00000269209 GCC2Q8IWJ2 1684 aa14.23□□□□□ -0.13
GAREM1-201ENST00000269209 WASHC2AQ641Q2 1341 aa14.22□□□□□ -0.13
GAREM1-201ENST00000269209 BCANQ96GW7 911 aa14.22□□□□□ -0.13
GAREM1-201ENST00000269209 AKNAQ7Z591 1439 aa14.21□□□□□ -0.13
GAREM1-201ENST00000269209 ROCK1Q13464 1354 aa14.21□□□□□ -0.13
GAREM1-201ENST00000269209 NCOA1Q15788 1441 aa14.21□□□□□ -0.13
GAREM1-201ENST00000269209 ANKRD30BQ9BXX2 1392 aa14.21□□□□□ -0.14
GAREM1-201ENST00000269209 KDM5BQ9UGL1 1544 aa14.2□□□□□ -0.14
GAREM1-201ENST00000269209 DNMT1P26358 1616 aaKnown RBP14.2□□□□□ -0.14
GAREM1-201ENST00000269209 C11orf95C9JLR9 678 aaPredicted RBP14.2□□□□□ -0.14
GAREM1-201ENST00000269209 SUPT16HQ9Y5B9 1047 aaKnown RBP14.19□□□□□ -0.14
GAREM1-201ENST00000269209 ANKRD30AQ9BXX3 1397 aa14.18□□□□□ -0.14
GAREM1-201ENST00000269209 KDM2AQ9Y2K7 1162 aa14.18□□□□□ -0.14
GAREM1-201ENST00000269209 NUP155O75694 1391 aa14.18□□□□□ -0.14
GAREM1-201ENST00000269209 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.17□□□□□ -0.14
GAREM1-201ENST00000269209 ANKRD50Q9ULJ7 1429 aa14.16□□□□□ -0.14
GAREM1-201ENST00000269209 C9orf84Q5VXU9 1444 aa14.13□□□□□ -0.15
GAREM1-201ENST00000269209 ABCA8O94911 1581 aa14.13□□□□□ -0.15
GAREM1-201ENST00000269209 RPRD2Q5VT52 1461 aaKnown RBP14.13□□□□□ -0.15
GAREM1-201ENST00000269209 PZPP20742 1482 aa14.13□□□□□ -0.15
GAREM1-201ENST00000269209 HNRNPUQ00839 825 aaKnown RBP eCLIP14.12□□□□□ -0.15
GAREM1-201ENST00000269209 CCER2I3L3R5 266 aa14.12□□□□□ -0.15
GAREM1-201ENST00000269209 FKBP8Q14318 412 aa14.11□□□□□ -0.15
GAREM1-201ENST00000269209 CCDC184Q52MB2 194 aa14.11□□□□□ -0.15
GAREM1-201ENST00000269209 ITSN2Q9NZM3 1697 aa14.11□□□□□ -0.15
GAREM1-201ENST00000269209 KIF15Q9NS87 1388 aa14.11□□□□□ -0.15
GAREM1-201ENST00000269209 ERCC6L2Q5T890 1561 aa14.11□□□□□ -0.15
GAREM1-201ENST00000269209 RGL3Q3MIN7 710 aa14.11□□□□□ -0.15
GAREM1-201ENST00000269209 SENP3-EIF4A1A0A087X0R7 540 aa14.1□□□□□ -0.15
GAREM1-201ENST00000269209 ABCC10Q5T3U5 1492 aa14.1□□□□□ -0.15
GAREM1-201ENST00000269209 CHD1O14646 1710 aa14.09□□□□□ -0.15
GAREM1-201ENST00000269209 FAM9BQ8IZU0 186 aa14.09□□□□□ -0.15
GAREM1-201ENST00000269209 DCAF11Q8TEB1 546 aa14.08□□□□□ -0.16
GAREM1-201ENST00000269209 KIAA1107Q9UPP5 1409 aa14.08□□□□□ -0.16
GAREM1-201ENST00000269209 CDC42BPAQ5VT25 1732 aa14.08□□□□□ -0.16
GAREM1-201ENST00000269209 TEX14Q8IWB6 1497 aa14.08□□□□□ -0.16
GAREM1-201ENST00000269209 KIF7Q2M1P5 1343 aa14.07□□□□□ -0.16
GAREM1-201ENST00000269209 CCDC7Q96M83 1385 aa14.06□□□□□ -0.16
GAREM1-201ENST00000269209 ADCY10Q96PN6 1610 aa14.05□□□□□ -0.16
GAREM1-201ENST00000269209 CARD11Q9BXL7 1154 aa14.04□□□□□ -0.16
GAREM1-201ENST00000269209 MYT1LQ9UL68 1186 aa14.04□□□□□ -0.16
GAREM1-201ENST00000269209 ARHGAP5Q13017 1502 aa14.04□□□□□ -0.16
GAREM1-201ENST00000269209 MRS2Q9HD23 443 aa14.04□□□□□ -0.16
GAREM1-201ENST00000269209 ADGRL2O95490 1459 aa14.03□□□□□ -0.16
GAREM1-201ENST00000269209 IRX6P78412 446 aaPredicted RBP14.03□□□□□ -0.16
GAREM1-201ENST00000269209 USP47Q96K76 1375 aa14.02□□□□□ -0.17
GAREM1-201ENST00000269209 NEFLP07196 543 aa14.02□□□□□ -0.17
GAREM1-201ENST00000269209 PRKRIP1Q9H875 184 aaPredicted RBP14.02□□□□□ -0.17
GAREM1-201ENST00000269209 MBD5Q9P267 1494 aa14.02□□□□□ -0.17
GAREM1-201ENST00000269209 ADGBQ8N7X0 1667 aa14.01□□□□□ -0.17
GAREM1-201ENST00000269209 CNTLNQ9NXG0 1405 aa14.01□□□□□ -0.17
GAREM1-201ENST00000269209 SYCP2Q9BX26 1530 aa14□□□□□ -0.17
GAREM1-201ENST00000269209 CROCC2H7BZ55 1655 aa13.99□□□□□ -0.17
GAREM1-201ENST00000269209 CCDC141Q6ZP82 1450 aa13.99□□□□□ -0.17
GAREM1-201ENST00000269209 SAMD9LQ8IVG5 1584 aa13.99□□□□□ -0.17
GAREM1-201ENST00000269209 ST20-MTHFSA0A0A6YYL1 179 aa13.99□□□□□ -0.17
GAREM1-201ENST00000269209 TTC37Q6PGP7 1564 aa13.98□□□□□ -0.17
GAREM1-201ENST00000269209 AFAP1Q8N556 730 aa13.98□□□□□ -0.17
GAREM1-201ENST00000269209 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.97□□□□□ -0.17
GAREM1-201ENST00000269209 SPATA31E1Q6ZUB1 1445 aa13.96□□□□□ -0.17
GAREM1-201ENST00000269209 CDC42BPBQ9Y5S2 1711 aa13.96□□□□□ -0.17
GAREM1-201ENST00000269209 SHANK2Q9UPX8 1470 aa13.95□□□□□ -0.18
GAREM1-201ENST00000269209 RSPH4AQ5TD94 716 aa13.95□□□□□ -0.18
GAREM1-201ENST00000269209 EFCAB2Q5VUJ9 269 aa13.95□□□□□ -0.18
GAREM1-201ENST00000269209 PLEKHH2Q8IVE3 1493 aa13.94□□□□□ -0.18
GAREM1-201ENST00000269209 NBPF1Q3BBV0 1214 aa13.94□□□□□ -0.18
GAREM1-201ENST00000269209 ABCC2Q92887 1545 aa13.94□□□□□ -0.18
GAREM1-201ENST00000269209 ROCK2O75116 1388 aaKnown RBP13.93□□□□□ -0.18
GAREM1-201ENST00000269209 CCDC144AA2RUR9 1427 aa13.93□□□□□ -0.18
GAREM1-201ENST00000269209 PREX2Q70Z35 1606 aa13.92□□□□□ -0.18
GAREM1-201ENST00000269209 FAM135AQ9P2D6 1515 aa13.91□□□□□ -0.18
GAREM1-201ENST00000269209 ARHGEF12Q9NZN5 1544 aa13.91□□□□□ -0.18
GAREM1-201ENST00000269209 TRAPPC8Q9Y2L5 1435 aa13.89□□□□□ -0.19
GAREM1-201ENST00000269209 SHROOM2Q13796 1616 aa13.89□□□□□ -0.19
GAREM1-201ENST00000269209 SPAG9O60271 1321 aaKnown RBP13.89□□□□□ -0.19
GAREM1-201ENST00000269209 ARHGEF5Q12774 1597 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms