RNA–Protein interactions for RNA: ENST00000268613.14

CDH13-201, Transcript of cadherin 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CDH13, Length 2,722 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-201ENST00000268613 SOGA1O94964 1423 aa10.59□□□□□ -0.71
CDH13-201ENST00000268613 FTSJ3Q8IY81 847 aaKnown RBP10.57□□□□□ -0.72
CDH13-201ENST00000268613 ERICH3Q5RHP9 1530 aa10.57□□□□□ -0.72
CDH13-201ENST00000268613 FAM177A1Q8N128 213 aaPredicted RBP10.57□□□□□ -0.72
CDH13-201ENST00000268613 NPM1P06748 294 aaKnown RBP eCLIP10.56□□□□□ -0.72
CDH13-201ENST00000268613 GRIN2BQ13224 1484 aa10.56□□□□□ -0.72
CDH13-201ENST00000268613 NBR1Q14596 966 aa10.55□□□□□ -0.72
CDH13-201ENST00000268613 FOXD4L5Q5VV16 416 aaPredicted RBP10.55□□□□□ -0.72
CDH13-201ENST00000268613 FOXD4L4Q8WXT5 416 aaPredicted RBP10.55□□□□□ -0.72
CDH13-201ENST00000268613 TSHZ2Q9NRE2 1034 aa10.55□□□□□ -0.72
CDH13-201ENST00000268613 GTF2E1P29083 439 aaPredicted RBP10.55□□□□□ -0.72
CDH13-201ENST00000268613 ARID4BQ4LE39 1312 aaPredicted RBP10.54□□□□□ -0.72
CDH13-201ENST00000268613 CUL7Q14999 1698 aa10.53□□□□□ -0.72
CDH13-201ENST00000268613 ZNF608Q9ULD9 1512 aaPredicted RBP10.53□□□□□ -0.72
CDH13-201ENST00000268613 RAD21O60216 631 aa10.53□□□□□ -0.72
CDH13-201ENST00000268613 GRIPAP1Q4V328 841 aa10.53□□□□□ -0.72
CDH13-201ENST00000268613 MTMR7Q9Y216 660 aa10.53□□□□□ -0.72
CDH13-201ENST00000268613 RBM25P49756 843 aaKnown RBP10.52□□□□□ -0.72
CDH13-201ENST00000268613 FOXD1Q16676 465 aa10.52□□□□□ -0.72
CDH13-201ENST00000268613 CHD1O14646 1710 aa10.52□□□□□ -0.73
CDH13-201ENST00000268613 ADAMTS12P58397 1594 aa10.52□□□□□ -0.73
CDH13-201ENST00000268613 CC2D2BQ6DHV5 1058 aa10.52□□□□□ -0.73
CDH13-201ENST00000268613 GAPVD1Q14C86 1478 aa10.51□□□□□ -0.73
CDH13-201ENST00000268613 RAD54L2Q9Y4B4 1467 aa10.51□□□□□ -0.73
CDH13-201ENST00000268613 KCTD17Q8N5Z5 321 aa10.5□□□□□ -0.73
CDH13-201ENST00000268613 RGS22Q8NE09 1264 aa10.49□□□□□ -0.73
CDH13-201ENST00000268613 SYNJ2O15056 1496 aa10.49□□□□□ -0.73
CDH13-201ENST00000268613 USP35Q9P2H5 1018 aa10.49□□□□□ -0.73
CDH13-201ENST00000268613 PPM1GO15355 546 aaPredicted RBP10.49□□□□□ -0.73
CDH13-201ENST00000268613 CLASP1Q7Z460 1538 aa10.47□□□□□ -0.73
CDH13-201ENST00000268613 CCDC27Q2M243 656 aa10.47□□□□□ -0.73
CDH13-201ENST00000268613 KDM4AO75164 1064 aa10.46□□□□□ -0.73
CDH13-201ENST00000268613 ARID3CA6NKF2 412 aa10.46□□□□□ -0.74
CDH13-201ENST00000268613 SNAPC4Q5SXM2 1469 aa10.46□□□□□ -0.74
CDH13-201ENST00000268613 PIAS4Q8N2W9 510 aaPredicted RBP10.45□□□□□ -0.74
CDH13-201ENST00000268613 FHAD1B1AJZ9 1412 aa10.45□□□□□ -0.74
CDH13-201ENST00000268613 ADRA2BP18089 450 aa10.44□□□□□ -0.74
CDH13-201ENST00000268613 DIEXFQ68CQ4 756 aaKnown RBP10.44□□□□□ -0.74
CDH13-201ENST00000268613 AQRO60306 1485 aaKnown RBP eCLIP10.44□□□□□ -0.74
CDH13-201ENST00000268613 ANAPC15P60006 121 aa10.44□□□□□ -0.74
CDH13-201ENST00000268613 IL27Q8NEV9 243 aa10.44□□□□□ -0.74
CDH13-201ENST00000268613 DNAJC5Q9H3Z4 198 aa10.44□□□□□ -0.74
CDH13-201ENST00000268613 NPM3O75607 178 aaKnown RBP10.43□□□□□ -0.74
CDH13-201ENST00000268613 OS9Q13438 667 aaPredicted RBP10.43□□□□□ -0.74
CDH13-201ENST00000268613 STAC3Q96MF2 364 aa10.43□□□□□ -0.74
CDH13-201ENST00000268613 KIF27Q86VH2 1401 aa10.43□□□□□ -0.74
CDH13-201ENST00000268613 PTMSP20962 102 aa10.43□□□□□ -0.74
CDH13-201ENST00000268613 SHROOM2Q13796 1616 aa10.43□□□□□ -0.74
CDH13-201ENST00000268613 BRPF1P55201 1214 aaPredicted RBP10.42□□□□□ -0.74
CDH13-201ENST00000268613 PATL2C9JE40 543 aaKnown RBP10.41□□□□□ -0.74
CDH13-201ENST00000268613 CANXP27824 592 aaKnown RBP10.41□□□□□ -0.74
CDH13-201ENST00000268613 NUP160Q12769 1436 aa10.41□□□□□ -0.74
CDH13-201ENST00000268613 EEA1Q15075 1411 aa10.41□□□□□ -0.74
CDH13-201ENST00000268613 FAM193AP78312 1265 aa10.41□□□□□ -0.74
CDH13-201ENST00000268613 GRIN2AQ12879 1464 aa10.4□□□□□ -0.74
CDH13-201ENST00000268613 MCCP23508 829 aa10.4□□□□□ -0.75
CDH13-201ENST00000268613 TDRD9Q8NDG6 1382 aaKnown RBP10.39□□□□□ -0.75
CDH13-201ENST00000268613 GPATCH11Q8N954 259 aa10.37□□□□□ -0.75
CDH13-201ENST00000268613 YTHDC1Q96MU7 727 aaKnown RBP10.37□□□□□ -0.75
CDH13-201ENST00000268613 OSCARQ8IYS5 282 aa10.37□□□□□ -0.75
CDH13-201ENST00000268613 SETQ01105 290 aaPredicted RBP10.36□□□□□ -0.75
CDH13-201ENST00000268613 PTMAP06454 111 aaKnown RBP10.36□□□□□ -0.75
CDH13-201ENST00000268613 DNAJC2Q99543 621 aaKnown RBP10.36□□□□□ -0.75
CDH13-201ENST00000268613 RUSC2Q8N2Y8 1516 aa10.35□□□□□ -0.75
CDH13-201ENST00000268613 FAM50AQ14320 339 aaKnown RBP10.35□□□□□ -0.75
CDH13-201ENST00000268613 CEP170Q5SW79 1584 aa10.35□□□□□ -0.75
CDH13-201ENST00000268613 SUPT16HQ9Y5B9 1047 aaKnown RBP10.35□□□□□ -0.75
CDH13-201ENST00000268613 MAFGO15525 162 aa10.33□□□□□ -0.76
CDH13-201ENST00000268613 FAM9BQ8IZU0 186 aa10.33□□□□□ -0.76
CDH13-201ENST00000268613 PLCD3Q8N3E9 789 aa10.33□□□□□ -0.76
CDH13-201ENST00000268613 RIMBP3CA6NJZ7 1639 aa10.33□□□□□ -0.76
CDH13-201ENST00000268613 RIMBP3BA6NNM3 1639 aa10.33□□□□□ -0.76
CDH13-201ENST00000268613 RIMBP3Q9UFD9 1639 aa10.33□□□□□ -0.76
CDH13-201ENST00000268613 CNGB1Q14028 1251 aaPredicted RBP10.33□□□□□ -0.76
CDH13-201ENST00000268613 IGF1RP08069 1367 aa10.33□□□□□ -0.76
CDH13-201ENST00000268613 CTTNBP2Q8WZ74 1663 aa10.32□□□□□ -0.76
CDH13-201ENST00000268613 SOX12O15370 315 aa10.3□□□□□ -0.76
CDH13-201ENST00000268613 KIAA0586Q9BVV6 1533 aa10.3□□□□□ -0.76
CDH13-201ENST00000268613 KIF21BO75037 1637 aa10.29□□□□□ -0.76
CDH13-201ENST00000268613 ARHGEF11O15085 1522 aa10.29□□□□□ -0.76
CDH13-201ENST00000268613 NEFMP07197 916 aa10.29□□□□□ -0.76
CDH13-201ENST00000268613 PRXQ9BXM0 1461 aa10.29□□□□□ -0.76
CDH13-201ENST00000268613 RAPGEF2Q9Y4G8 1499 aa10.28□□□□□ -0.76
CDH13-201ENST00000268613 RTL5Q5HYW3 569 aaPredicted RBP10.28□□□□□ -0.76
CDH13-201ENST00000268613 SGSM3Q96HU1 749 aa10.27□□□□□ -0.76
CDH13-201ENST00000268613 TMTC2Q8N394 836 aa10.27□□□□□ -0.77
CDH13-201ENST00000268613 PLEKHD1A6NEE1 506 aa10.26□□□□□ -0.77
CDH13-201ENST00000268613 CHMP7Q8WUX9 453 aaPredicted RBP10.26□□□□□ -0.77
CDH13-201ENST00000268613 ZNF830Q96NB3 372 aaPredicted RBP10.26□□□□□ -0.77
CDH13-201ENST00000268613 UGGT2Q9NYU1 1516 aa10.26□□□□□ -0.77
CDH13-201ENST00000268613 CARMIL1Q5VZK9 1371 aa10.26□□□□□ -0.77
CDH13-201ENST00000268613 CDCA8Q53HL2 280 aa10.26□□□□□ -0.77
CDH13-201ENST00000268613 PRDM4Q9UKN5 801 aa10.25□□□□□ -0.77
CDH13-201ENST00000268613 LAS1LQ9Y4W2 734 aaKnown RBP10.25□□□□□ -0.77
CDH13-201ENST00000268613 IQGAP2Q13576 1575 aa10.25□□□□□ -0.77
CDH13-201ENST00000268613 MSH5O43196 834 aa10.23□□□□□ -0.77
CDH13-201ENST00000268613 FOXD4L6Q3SYB3 417 aaPredicted RBP10.23□□□□□ -0.77
CDH13-201ENST00000268613 FOXD4L3Q6VB84 417 aaPredicted RBP10.23□□□□□ -0.77
CDH13-201ENST00000268613 CLGNO14967 610 aa10.22□□□□□ -0.77
CDH13-201ENST00000268613 SLC52A1Q9NWF4 448 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms