RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 MARCH6O60337 910 aa16.02■□□□□ 0.16
CDH11-201ENST00000268603 TAF7LQ5H9L4 462 aa16.02■□□□□ 0.15
CDH11-201ENST00000268603 CALRP27797 417 aaKnown RBP16.02■□□□□ 0.15
CDH11-201ENST00000268603 KIAA1211Q6ZU35 1233 aa16.02■□□□□ 0.15
CDH11-201ENST00000268603 GOLGA6L1Q8N7Z2 621 aa16.02■□□□□ 0.15
CDH11-201ENST00000268603 CC2D1BQ5T0F9 858 aaKnown RBP16.01■□□□□ 0.15
CDH11-201ENST00000268603 DCAF1Q9Y4B6 1507 aa16.01■□□□□ 0.15
CDH11-201ENST00000268603 PLEKHD1A6NEE1 506 aa15.99■□□□□ 0.15
CDH11-201ENST00000268603 MS4A1P11836 297 aa15.98■□□□□ 0.15
CDH11-201ENST00000268603 CARD11Q9BXL7 1154 aa15.97■□□□□ 0.15
CDH11-201ENST00000268603 FRAT2O75474 233 aaPredicted RBP15.97■□□□□ 0.15
CDH11-201ENST00000268603 SAFB2Q14151 953 aaKnown RBP eCLIP15.97■□□□□ 0.15
CDH11-201ENST00000268603 TPM4P67936 248 aa15.97■□□□□ 0.15
CDH11-201ENST00000268603 SRPK2P78362 688 aaKnown RBP15.97■□□□□ 0.15
CDH11-201ENST00000268603 MSH5O43196 834 aa15.96■□□□□ 0.15
CDH11-201ENST00000268603 PATL2C9JE40 543 aaKnown RBP15.94■□□□□ 0.14
CDH11-201ENST00000268603 HDGFP51858 240 aaKnown RBP15.93■□□□□ 0.14
CDH11-201ENST00000268603 TOMM22Q9NS69 142 aa15.93■□□□□ 0.14
CDH11-201ENST00000268603 GTF2E1P29083 439 aaPredicted RBP15.93■□□□□ 0.14
CDH11-201ENST00000268603 NOP58Q9Y2X3 529 aaKnown RBP15.93■□□□□ 0.14
CDH11-201ENST00000268603 CWC22Q9HCG8 908 aaKnown RBP15.92■□□□□ 0.14
CDH11-201ENST00000268603 TCEAL9Q9UHQ7 104 aa15.92■□□□□ 0.14
CDH11-201ENST00000268603 SETQ01105 290 aaPredicted RBP15.91■□□□□ 0.14
CDH11-201ENST00000268603 PES1O00541 588 aaKnown RBP15.91■□□□□ 0.14
CDH11-201ENST00000268603 CTDP1Q9Y5B0 961 aaPredicted RBP15.91■□□□□ 0.14
CDH11-201ENST00000268603 RAD21O60216 631 aa15.91■□□□□ 0.14
CDH11-201ENST00000268603 HTATSF1O43719 755 aaKnown RBP15.9■□□□□ 0.14
CDH11-201ENST00000268603 KLHL34Q8N239 644 aa15.89■□□□□ 0.13
CDH11-201ENST00000268603 CCDC34Q96HJ3 373 aa15.89■□□□□ 0.13
CDH11-201ENST00000268603 SUPT16HQ9Y5B9 1047 aaKnown RBP15.89■□□□□ 0.13
CDH11-201ENST00000268603 STK26Q9P289 416 aa15.87■□□□□ 0.13
CDH11-201ENST00000268603 TPM3P06753 285 aa15.86■□□□□ 0.13
CDH11-201ENST00000268603 TRIM34Q9BYJ4 488 aa15.84■□□□□ 0.13
CDH11-201ENST00000268603 PHF23Q9BUL5 403 aaPredicted RBP15.84■□□□□ 0.13
CDH11-201ENST00000268603 USP35Q9P2H5 1018 aa15.84■□□□□ 0.13
CDH11-201ENST00000268603 DCAF8L1A6NGE4 600 aa15.82■□□□□ 0.12
CDH11-201ENST00000268603 CFDP1Q9UEE9 299 aaPredicted RBP15.82■□□□□ 0.12
CDH11-201ENST00000268603 GPATCH3Q96I76 525 aa15.82■□□□□ 0.12
CDH11-201ENST00000268603 MORC1Q86VD1 984 aa15.82■□□□□ 0.12
CDH11-201ENST00000268603 TPD52L1Q16890 204 aaPredicted RBP15.82■□□□□ 0.12
CDH11-201ENST00000268603 B4GALNT3Q6L9W6 998 aa15.82■□□□□ 0.12
CDH11-201ENST00000268603 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.82■□□□□ 0.122e-6■■■■■ 96.1
CDH11-201ENST00000268603 MIER1Q8N108 512 aa15.81■□□□□ 0.12
CDH11-201ENST00000268603 CFAP44Q96MT7 982 aa15.81■□□□□ 0.12
CDH11-201ENST00000268603 TRIM6-TRIM34B2RNG4 842 aa15.81■□□□□ 0.12
CDH11-201ENST00000268603 FBXW7Q969H0 707 aa15.79■□□□□ 0.12
CDH11-201ENST00000268603 NOL8Q76FK4 1167 aaKnown RBP15.79■□□□□ 0.12
CDH11-201ENST00000268603 AEBP2Q6ZN18 517 aaPredicted RBP15.79■□□□□ 0.12
CDH11-201ENST00000268603 GZF1Q9H116 711 aaPredicted RBP15.79■□□□□ 0.12
CDH11-201ENST00000268603 HDGFL2Q7Z4V5 671 aaPredicted RBP15.77■□□□□ 0.11
CDH11-201ENST00000268603 DEKP35659 375 aaKnown RBP15.77■□□□□ 0.11
CDH11-201ENST00000268603 MEX3CQ5U5Q3 659 aaKnown RBP15.76■□□□□ 0.11
CDH11-201ENST00000268603 SAMD1Q6SPF0 538 aaPredicted RBP15.76■□□□□ 0.11
CDH11-201ENST00000268603 SYAP1Q96A49 352 aaPredicted RBP15.75■□□□□ 0.11
CDH11-201ENST00000268603 TSR1Q2NL82 804 aaKnown RBP15.75■□□□□ 0.11
CDH11-201ENST00000268603 SF3A1Q15459 793 aaKnown RBP15.75■□□□□ 0.11
CDH11-201ENST00000268603 ITPRIPQ8IWB1 547 aa15.74■□□□□ 0.11
CDH11-201ENST00000268603 GBP4Q96PP9 640 aa15.74■□□□□ 0.11
CDH11-201ENST00000268603 TMF1P82094 1093 aa15.74■□□□□ 0.11
CDH11-201ENST00000268603 KANK1Q14678 1352 aa15.74■□□□□ 0.11
CDH11-201ENST00000268603 TPM2P07951 284 aa15.73■□□□□ 0.11
CDH11-201ENST00000268603 CCAR2Q8N163 923 aaKnown RBP15.73■□□□□ 0.11
CDH11-201ENST00000268603 RRP12Q5JTH9 1297 aaKnown RBP15.73■□□□□ 0.11
CDH11-201ENST00000268603 STK31Q9BXU1 1019 aa15.73■□□□□ 0.11
CDH11-201ENST00000268603 PTMSP20962 102 aa15.73■□□□□ 0.11
CDH11-201ENST00000268603 PPP4R2Q9NY27 417 aa15.72■□□□□ 0.11
CDH11-201ENST00000268603 IPO8O15397 1037 aaKnown RBP15.72■□□□□ 0.11
CDH11-201ENST00000268603 SLC4A10Q6U841 1118 aa15.72■□□□□ 0.11
CDH11-201ENST00000268603 NOL10Q9BSC4 688 aaKnown RBP15.71■□□□□ 0.11
CDH11-201ENST00000268603 SPAG9O60271 1321 aaKnown RBP15.71■□□□□ 0.11
CDH11-201ENST00000268603 AKAP17AQ02040 695 aaKnown RBP15.71■□□□□ 0.11
CDH11-201ENST00000268603 PCMTD1Q96MG8 357 aaPredicted RBP15.71■□□□□ 0.1
CDH11-201ENST00000268603 RSF1Q96T23 1441 aaPredicted RBP15.7■□□□□ 0.1
CDH11-201ENST00000268603 LTV1Q96GA3 475 aaPredicted RBP15.7■□□□□ 0.1
CDH11-201ENST00000268603 GGT6Q6P531 493 aa15.7■□□□□ 0.1
CDH11-201ENST00000268603 PAF1Q8N7H5 531 aa15.69■□□□□ 0.1
CDH11-201ENST00000268603 DHX16O60231 1041 aaKnown RBP15.69■□□□□ 0.1
CDH11-201ENST00000268603 CCDC180Q9P1Z9 1646 aa15.69■□□□□ 0.1
CDH11-201ENST00000268603 CSPP1Q1MSJ5 1256 aa15.69■□□□□ 0.1
CDH11-201ENST00000268603 AMOTL1Q8IY63 956 aa15.69■□□□□ 0.1
CDH11-201ENST00000268603 CCDC43Q96MW1 224 aaKnown RBP15.68■□□□□ 0.1
CDH11-201ENST00000268603 FOXD4L1Q9NU39 408 aa15.68■□□□□ 0.1
CDH11-201ENST00000268603 EVA1CP58658 441 aa15.68■□□□□ 0.1
CDH11-201ENST00000268603 FOXD4L5Q5VV16 416 aaPredicted RBP15.67■□□□□ 0.1
CDH11-201ENST00000268603 FOXD4L4Q8WXT5 416 aaPredicted RBP15.67■□□□□ 0.1
CDH11-201ENST00000268603 DCAF11Q8TEB1 546 aa15.67■□□□□ 0.1
CDH11-201ENST00000268603 CALD1Q05682 793 aaKnown RBP15.66■□□□□ 0.1
CDH11-201ENST00000268603 H3BQV1 296 aa15.65■□□□□ 0.1
CDH11-201ENST00000268603 IFFO2Q5TF58 517 aa15.65■□□□□ 0.1
CDH11-201ENST00000268603 U2AF1L5P0DN76 240 aaPredicted RBP15.65■□□□□ 0.1
CDH11-201ENST00000268603 U2AF1Q01081 240 aaKnown RBP eCLIP15.65■□□□□ 0.1
CDH11-201ENST00000268603 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.65■□□□□ 0.1
CDH11-201ENST00000268603 SLKQ9H2G2 1235 aaPredicted RBP15.64■□□□□ 0.1
CDH11-201ENST00000268603 CCDC70Q6NSX1 233 aa15.64■□□□□ 0.09
CDH11-201ENST00000268603 KIF16BQ96L93 1317 aa15.64■□□□□ 0.09
CDH11-201ENST00000268603 MFAP1P55081 439 aaKnown RBP15.63■□□□□ 0.09
CDH11-201ENST00000268603 ODF2Q5BJF6 829 aa15.63■□□□□ 0.09
CDH11-201ENST00000268603 TPM1P09493 284 aa15.63■□□□□ 0.09
CDH11-201ENST00000268603 R3HCC1Q9Y3T6 440 aaKnown RBP15.62■□□□□ 0.09
CDH11-201ENST00000268603 NGDNQ8NEJ9 315 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms