RNA–Protein interactions for RNA: ENST00000267202.6

VPS37B-201, Transcript of VPS37B, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS37B, Length 3,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-201ENST00000267202 ZNF608Q9ULD9 1512 aaPredicted RBP25.41■■□□□ 1.66
VPS37B-201ENST00000267202 HECW1Q76N89 1606 aa25.39■■□□□ 1.65
VPS37B-201ENST00000267202 RBM19Q9Y4C8 960 aaKnown RBP25.39■■□□□ 1.65
VPS37B-201ENST00000267202 ARHGEF11O15085 1522 aa25.37■■□□□ 1.65
VPS37B-201ENST00000267202 PBRM1Q86U86 1689 aa25.36■■□□□ 1.65
VPS37B-201ENST00000267202 TCOF1Q13428 1488 aaKnown RBP25.33■■□□□ 1.64
VPS37B-201ENST00000267202 MRS2Q9HD23 443 aa25.31■■□□□ 1.64
VPS37B-201ENST00000267202 WDR62O43379 1518 aa25.29■■□□□ 1.64
VPS37B-201ENST00000267202 ADAMTS12P58397 1594 aa25.29■■□□□ 1.64
VPS37B-201ENST00000267202 DAPK1P53355 1430 aa25.27■■□□□ 1.64
VPS37B-201ENST00000267202 CFDP1Q9UEE9 299 aaPredicted RBP25.27■■□□□ 1.64
VPS37B-201ENST00000267202 GCC2Q8IWJ2 1684 aa25.26■■□□□ 1.63
VPS37B-201ENST00000267202 ABCC5O15440 1437 aa25.26■■□□□ 1.63
VPS37B-201ENST00000267202 PRG4Q92954 1404 aaPredicted RBP25.25■■□□□ 1.63
VPS37B-201ENST00000267202 MIA2Q96PC5 1412 aa25.24■■□□□ 1.63
VPS37B-201ENST00000267202 PRKRIP1Q9H875 184 aaPredicted RBP25.24■■□□□ 1.63
VPS37B-201ENST00000267202 CCDC7Q96M83 1385 aa25.24■■□□□ 1.63
VPS37B-201ENST00000267202 MRC2Q9UBG0 1479 aa25.23■■□□□ 1.63
VPS37B-201ENST00000267202 ANKRD30BQ9BXX2 1392 aa25.22■■□□□ 1.63
VPS37B-201ENST00000267202 CHMP7Q8WUX9 453 aaPredicted RBP25.22■■□□□ 1.63
VPS37B-201ENST00000267202 CNTLNQ9NXG0 1405 aa25.22■■□□□ 1.63
VPS37B-201ENST00000267202 CDK11AQ9UQ88 783 aaPredicted RBP25.22■■□□□ 1.63
VPS37B-201ENST00000267202 KIF7Q2M1P5 1343 aa25.2■■□□□ 1.63
VPS37B-201ENST00000267202 NUP153P49790 1475 aaKnown RBP25.2■■□□□ 1.62
VPS37B-201ENST00000267202 ERICH6Q7L0X2 663 aa25.18■■□□□ 1.62
VPS37B-201ENST00000267202 DISP1Q96F81 1524 aa25.18■■□□□ 1.62
VPS37B-201ENST00000267202 MSH5O43196 834 aa25.16■■□□□ 1.62
VPS37B-201ENST00000267202 PKD2Q13563 968 aa25.16■■□□□ 1.62
VPS37B-201ENST00000267202 PLB1Q6P1J6 1458 aa25.15■■□□□ 1.62
VPS37B-201ENST00000267202 KDM2AQ9Y2K7 1162 aa25.14■■□□□ 1.61
VPS37B-201ENST00000267202 AKNAQ7Z591 1439 aa25.14■■□□□ 1.61
VPS37B-201ENST00000267202 NCOA1Q15788 1441 aa25.13■■□□□ 1.61
VPS37B-201ENST00000267202 RPRD2Q5VT52 1461 aaKnown RBP25.12■■□□□ 1.61
VPS37B-201ENST00000267202 B4GALNT3Q6L9W6 998 aa25.12■■□□□ 1.61
VPS37B-201ENST00000267202 KIAA0556O60303 1618 aa25.11■■□□□ 1.61
VPS37B-201ENST00000267202 KIAA0586Q9BVV6 1533 aa25.11■■□□□ 1.61
VPS37B-201ENST00000267202 TEX14Q8IWB6 1497 aa25.08■■□□□ 1.61
VPS37B-201ENST00000267202 ROCK1Q13464 1354 aa25.07■■□□□ 1.6
VPS37B-201ENST00000267202 GRIN2AQ12879 1464 aa25.06■■□□□ 1.6
VPS37B-201ENST00000267202 IFT140Q96RY7 1462 aa25.06■■□□□ 1.6
VPS37B-201ENST00000267202 DNMT1P26358 1616 aaKnown RBP25.06■■□□□ 1.6
VPS37B-201ENST00000267202 RAPGEF6Q8TEU7 1601 aa25.06■■□□□ 1.6
VPS37B-201ENST00000267202 CAMSAP2Q08AD1 1489 aa25.05■■□□□ 1.6
VPS37B-201ENST00000267202 JPH4Q96JJ6 628 aa25.03■■□□□ 1.6
VPS37B-201ENST00000267202 PZPP20742 1482 aa25.02■■□□□ 1.6
VPS37B-201ENST00000267202 ERCC6Q03468 1493 aa25.01■■□□□ 1.59
VPS37B-201ENST00000267202 KIF14Q15058 1648 aa25.01■■□□□ 1.59
VPS37B-201ENST00000267202 TROQ12816 1431 aaPredicted RBP25.01■■□□□ 1.59
VPS37B-201ENST00000267202 HNRNPMP52272 730 aaKnown RBP eCLIP24.99■■□□□ 1.593e-7■■■■□ 24.6
VPS37B-201ENST00000267202 USP47Q96K76 1375 aa24.99■■□□□ 1.59
VPS37B-201ENST00000267202 GPATCH8Q9UKJ3 1502 aaKnown RBP24.98■■□□□ 1.59
VPS37B-201ENST00000267202 EIF4G3O43432 1585 aaKnown RBP24.98■■□□□ 1.59
VPS37B-201ENST00000267202 NUP155O75694 1391 aa24.97■■□□□ 1.59
VPS37B-201ENST00000267202 PLEKHD1A6NEE1 506 aa24.97■■□□□ 1.59
VPS37B-201ENST00000267202 SPATA31E1Q6ZUB1 1445 aa24.97■■□□□ 1.59
VPS37B-201ENST00000267202 CARD11Q9BXL7 1154 aa24.95■■□□□ 1.58
VPS37B-201ENST00000267202 PPP4R2Q9NY27 417 aa24.95■■□□□ 1.58
VPS37B-201ENST00000267202 SALL2Q9Y467 1007 aaPredicted RBP24.94■■□□□ 1.58
VPS37B-201ENST00000267202 ZBED9Q6R2W3 1325 aa24.94■■□□□ 1.58
VPS37B-201ENST00000267202 DCAF11Q8TEB1 546 aa24.93■■□□□ 1.58
VPS37B-201ENST00000267202 ANKRD30AQ9BXX3 1397 aa24.92■■□□□ 1.58
VPS37B-201ENST00000267202 KIAA1107Q9UPP5 1409 aa24.92■■□□□ 1.58
VPS37B-201ENST00000267202 ANKRD50Q9ULJ7 1429 aa24.91■■□□□ 1.58
VPS37B-201ENST00000267202 RGL3Q3MIN7 710 aa24.9■■□□□ 1.58
VPS37B-201ENST00000267202 CEP170Q5SW79 1584 aa24.9■■□□□ 1.58
VPS37B-201ENST00000267202 TSPY4P0CV99 314 aa24.89■■□□□ 1.58
VPS37B-201ENST00000267202 TSPY10P0CW01 314 aa24.89■■□□□ 1.58
VPS37B-201ENST00000267202 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.89■■□□□ 1.57
VPS37B-201ENST00000267202 ST20-MTHFSA0A0A6YYL1 179 aa24.88■■□□□ 1.57
VPS37B-201ENST00000267202 TMC1Q8TDI8 760 aa24.86■■□□□ 1.57
VPS37B-201ENST00000267202 DHX29Q7Z478 1369 aaKnown RBP24.86■■□□□ 1.57
VPS37B-201ENST00000267202 BCORL1Q5H9F3 1711 aa24.86■■□□□ 1.57
VPS37B-201ENST00000267202 CARMIL2Q6F5E8 1435 aa24.84■■□□□ 1.57
VPS37B-201ENST00000267202 C9orf84Q5VXU9 1444 aa24.81■■□□□ 1.56
VPS37B-201ENST00000267202 SYNJ2O15056 1496 aa24.8■■□□□ 1.56
VPS37B-201ENST00000267202 KIF15Q9NS87 1388 aa24.76■■□□□ 1.55
VPS37B-201ENST00000267202 ITSN2Q9NZM3 1697 aa24.76■■□□□ 1.55
VPS37B-201ENST00000267202 ATP10BO94823 1461 aa24.76■■□□□ 1.55
VPS37B-201ENST00000267202 MBD5Q9P267 1494 aa24.75■■□□□ 1.55
VPS37B-201ENST00000267202 MAGI1Q96QZ7 1491 aaPredicted RBP24.75■■□□□ 1.55
VPS37B-201ENST00000267202 ADGBQ8N7X0 1667 aa24.74■■□□□ 1.55
VPS37B-201ENST00000267202 NUDCQ9Y266 331 aa24.73■■□□□ 1.55
VPS37B-201ENST00000267202 NBPF1Q3BBV0 1214 aa24.73■■□□□ 1.55
VPS37B-201ENST00000267202 PNISRQ8TF01 805 aaKnown RBP24.73■■□□□ 1.55
VPS37B-201ENST00000267202 NBR1Q14596 966 aa24.72■■□□□ 1.55
VPS37B-201ENST00000267202 CCDC136Q96JN2 1154 aa24.72■■□□□ 1.55
VPS37B-201ENST00000267202 ADGRL2O95490 1459 aa24.71■■□□□ 1.55
VPS37B-201ENST00000267202 ROCK2O75116 1388 aaKnown RBP24.7■■□□□ 1.55
VPS37B-201ENST00000267202 ERICH6BQ5W0A0 696 aa24.69■■□□□ 1.54
VPS37B-201ENST00000267202 CDC42BPAQ5VT25 1732 aa24.68■■□□□ 1.54
VPS37B-201ENST00000267202 KDM5CP41229 1560 aa24.68■■□□□ 1.54
VPS37B-201ENST00000267202 FANCIQ9NVI1 1328 aa24.67■■□□□ 1.54
VPS37B-201ENST00000267202 CROCC2H7BZ55 1655 aa24.67■■□□□ 1.54
VPS37B-201ENST00000267202 CC2D1BQ5T0F9 858 aaKnown RBP24.66■■□□□ 1.54
VPS37B-201ENST00000267202 POLR1AO95602 1720 aaPredicted RBP24.65■■□□□ 1.54
VPS37B-201ENST00000267202 ABCC10Q5T3U5 1492 aa24.64■■□□□ 1.54
VPS37B-201ENST00000267202 NUP160Q12769 1436 aa24.64■■□□□ 1.53
VPS37B-201ENST00000267202 SMG6Q86US8 1419 aaKnown RBP24.64■■□□□ 1.53
VPS37B-201ENST00000267202 PTPRGP23470 1445 aa24.63■■□□□ 1.53
VPS37B-201ENST00000267202 DEKP35659 375 aaKnown RBP24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms