RNA–Protein interactions for RNA: ENST00000265993.13

TCTN3-201, Transcript of tectonic family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCTN3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-201ENST00000265993 DAPK1P53355 1430 aa15.32■□□□□ 0.04
TCTN3-201ENST00000265993 HSPA5P11021 654 aaKnown RBP15.31■□□□□ 0.04
TCTN3-201ENST00000265993 ABCC5O15440 1437 aa15.31■□□□□ 0.04
TCTN3-201ENST00000265993 CEP170Q5SW79 1584 aa15.29■□□□□ 0.04
TCTN3-201ENST00000265993 WASHC2AQ641Q2 1341 aa15.29■□□□□ 0.04
TCTN3-201ENST00000265993 AKNAQ7Z591 1439 aa15.28■□□□□ 0.04
TCTN3-201ENST00000265993 SLC4A1APQ9BWU0 796 aaKnown RBP15.27■□□□□ 0.04
TCTN3-201ENST00000265993 CDK11AQ9UQ88 783 aaPredicted RBP15.27■□□□□ 0.04
TCTN3-201ENST00000265993 CFDP1Q9UEE9 299 aaPredicted RBP15.27■□□□□ 0.03
TCTN3-201ENST00000265993 DNMT1P26358 1616 aaKnown RBP15.26■□□□□ 0.03
TCTN3-201ENST00000265993 CCER2I3L3R5 266 aa15.26■□□□□ 0.03
TCTN3-201ENST00000265993 FKBP8Q14318 412 aa15.26■□□□□ 0.03
TCTN3-201ENST00000265993 KIF14Q15058 1648 aa15.25■□□□□ 0.03
TCTN3-201ENST00000265993 JPH4Q96JJ6 628 aa15.25■□□□□ 0.03
TCTN3-201ENST00000265993 C11orf95C9JLR9 678 aaPredicted RBP15.25■□□□□ 0.03
TCTN3-201ENST00000265993 NBPF8Q3BBV2 869 aa15.24■□□□□ 0.03
TCTN3-201ENST00000265993 SYNJ2O15056 1496 aa15.23■□□□□ 0.03
TCTN3-201ENST00000265993 EIF4G2P78344 907 aaKnown RBP eCLIP15.23■□□□□ 0.03
TCTN3-201ENST00000265993 ANKRD30BQ9BXX2 1392 aa15.23■□□□□ 0.03
TCTN3-201ENST00000265993 MAGI1Q96QZ7 1491 aaPredicted RBP15.23■□□□□ 0.03
TCTN3-201ENST00000265993 TROQ12816 1431 aaPredicted RBP15.23■□□□□ 0.03
TCTN3-201ENST00000265993 CAMSAP2Q08AD1 1489 aa15.22■□□□□ 0.03
TCTN3-201ENST00000265993 ROCK1Q13464 1354 aa15.21■□□□□ 0.03
TCTN3-201ENST00000265993 GPATCH8Q9UKJ3 1502 aaKnown RBP15.2■□□□□ 0.02
TCTN3-201ENST00000265993 CCDC184Q52MB2 194 aa15.19■□□□□ 0.02
TCTN3-201ENST00000265993 ZNF326Q5BKZ1 582 aaKnown RBP15.18■□□□□ 0.02
TCTN3-201ENST00000265993 RPRD2Q5VT52 1461 aaKnown RBP15.18■□□□□ 0.02
TCTN3-201ENST00000265993 HNRNPUQ00839 825 aaKnown RBP eCLIP15.17■□□□□ 0.02
TCTN3-201ENST00000265993 CNGB1Q14028 1251 aaPredicted RBP15.17■□□□□ 0.02
TCTN3-201ENST00000265993 NCOA1Q15788 1441 aa15.17■□□□□ 0.02
TCTN3-201ENST00000265993 TEX14Q8IWB6 1497 aa15.17■□□□□ 0.02
TCTN3-201ENST00000265993 CARMIL2Q6F5E8 1435 aa15.16■□□□□ 0.02
TCTN3-201ENST00000265993 PZPP20742 1482 aa15.15■□□□□ 0.02
TCTN3-201ENST00000265993 NUP160Q12769 1436 aa15.15■□□□□ 0.02
TCTN3-201ENST00000265993 TSHZ2Q9NRE2 1034 aa15.15■□□□□ 0.02
TCTN3-201ENST00000265993 ITSN2Q9NZM3 1697 aa15.14■□□□□ 0.01
TCTN3-201ENST00000265993 PLEKHD1A6NEE1 506 aa15.14■□□□□ 0.01
TCTN3-201ENST00000265993 PKD2Q13563 968 aa15.14■□□□□ 0.01
TCTN3-201ENST00000265993 CCDC7Q96M83 1385 aa15.12■□□□□ 0.01
TCTN3-201ENST00000265993 POLR3GLQ9BT43 218 aa15.11■□□□□ 0.01
TCTN3-201ENST00000265993 CDC42BPAQ5VT25 1732 aa15.11■□□□□ 0.01
TCTN3-201ENST00000265993 CNTLNQ9NXG0 1405 aa15.11■□□□□ 0.01
TCTN3-201ENST00000265993 ATP10BO94823 1461 aa15.11■□□□□ 0.01
TCTN3-201ENST00000265993 NEFLP07196 543 aa15.1■□□□□ 0.01
TCTN3-201ENST00000265993 HNRNPMP52272 730 aaKnown RBP eCLIP15.1■□□□□ 0.01
TCTN3-201ENST00000265993 IRX6P78412 446 aaPredicted RBP15.1■□□□□ 0.01
TCTN3-201ENST00000265993 ADGBQ8N7X0 1667 aa15.1■□□□□ 0.01
TCTN3-201ENST00000265993 KIF7Q2M1P5 1343 aa15.1■□□□□ 0.01
TCTN3-201ENST00000265993 ADCY10Q96PN6 1610 aa15.09■□□□□ 0.01
TCTN3-201ENST00000265993 FAM9BQ8IZU0 186 aa15.09■□□□□ 0.01
TCTN3-201ENST00000265993 ANKRD50Q9ULJ7 1429 aa15.09■□□□□ 0.01
TCTN3-201ENST00000265993 CROCC2H7BZ55 1655 aa15.09■□□□□ 0.01
TCTN3-201ENST00000265993 ANKRD30AQ9BXX3 1397 aa15.08■□□□□ 0
TCTN3-201ENST00000265993 PRKRIP1Q9H875 184 aaPredicted RBP15.08■□□□□ 0
TCTN3-201ENST00000265993 ABCA8O94911 1581 aa15.07■□□□□ 0
TCTN3-201ENST00000265993 SPATA31E1Q6ZUB1 1445 aa15.06■□□□□ 0
TCTN3-201ENST00000265993 KIAA1107Q9UPP5 1409 aa15.06■□□□□ 0
TCTN3-201ENST00000265993 NUP155O75694 1391 aa15.06■□□□□ 0
TCTN3-201ENST00000265993 ABCC10Q5T3U5 1492 aa15.05■□□□□ 0
TCTN3-201ENST00000265993 C9orf84Q5VXU9 1444 aa15.05■□□□□ -0
TCTN3-201ENST00000265993 ADGRL2O95490 1459 aa15.05■□□□□ -0
TCTN3-201ENST00000265993 MRS2Q9HD23 443 aa15.04■□□□□ -0
TCTN3-201ENST00000265993 SENP3-EIF4A1A0A087X0R7 540 aa15.04■□□□□ -0
TCTN3-201ENST00000265993 TSPY4P0CV99 314 aa15.03■□□□□ -0
TCTN3-201ENST00000265993 TSPY10P0CW01 314 aa15.03■□□□□ -0
TCTN3-201ENST00000265993 KDM2AQ9Y2K7 1162 aa15.03■□□□□ -0
TCTN3-201ENST00000265993 PTPRGP23470 1445 aa15.02■□□□□ -0
TCTN3-201ENST00000265993 USP47Q96K76 1375 aa15.01□□□□□ -0.01
TCTN3-201ENST00000265993 BCORL1Q5H9F3 1711 aa15.01□□□□□ -0.01
TCTN3-201ENST00000265993 KIF15Q9NS87 1388 aa15□□□□□ -0.01
TCTN3-201ENST00000265993 MBD5Q9P267 1494 aa15□□□□□ -0.01
TCTN3-201ENST00000265993 CHD1O14646 1710 aa14.97□□□□□ -0.01
TCTN3-201ENST00000265993 POLR1AO95602 1720 aaPredicted RBP14.97□□□□□ -0.01
TCTN3-201ENST00000265993 CDC42BPBQ9Y5S2 1711 aa14.96□□□□□ -0.01
TCTN3-201ENST00000265993 DCAF11Q8TEB1 546 aa14.96□□□□□ -0.01
TCTN3-201ENST00000265993 CARD11Q9BXL7 1154 aa14.95□□□□□ -0.02
TCTN3-201ENST00000265993 SAMD9LQ8IVG5 1584 aa14.95□□□□□ -0.02
TCTN3-201ENST00000265993 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.95□□□□□ -0.02
TCTN3-201ENST00000265993 ERCC6L2Q5T890 1561 aa14.95□□□□□ -0.02
TCTN3-201ENST00000265993 SHANK2Q9UPX8 1470 aa14.94□□□□□ -0.02
TCTN3-201ENST00000265993 RGL3Q3MIN7 710 aa14.93□□□□□ -0.02
TCTN3-201ENST00000265993 KDM5CP41229 1560 aa14.93□□□□□ -0.02
TCTN3-201ENST00000265993 DHX29Q7Z478 1369 aaKnown RBP14.92□□□□□ -0.02
TCTN3-201ENST00000265993 ST20-MTHFSA0A0A6YYL1 179 aa14.92□□□□□ -0.02
TCTN3-201ENST00000265993 SYCP2Q9BX26 1530 aa14.91□□□□□ -0.02
TCTN3-201ENST00000265993 TTC37Q6PGP7 1564 aa14.91□□□□□ -0.02
TCTN3-201ENST00000265993 CCDC141Q6ZP82 1450 aa14.9□□□□□ -0.02
TCTN3-201ENST00000265993 PREX2Q70Z35 1606 aa14.89□□□□□ -0.03
TCTN3-201ENST00000265993 ARHGAP5Q13017 1502 aa14.89□□□□□ -0.03
TCTN3-201ENST00000265993 ARHGEF5Q12774 1597 aa14.88□□□□□ -0.03
TCTN3-201ENST00000265993 FAM135AQ9P2D6 1515 aa14.88□□□□□ -0.03
TCTN3-201ENST00000265993 RBM19Q9Y4C8 960 aaKnown RBP14.87□□□□□ -0.03
TCTN3-201ENST00000265993 RALGAPBQ86X10 1494 aa14.87□□□□□ -0.03
TCTN3-201ENST00000265993 ZBED9Q6R2W3 1325 aa14.87□□□□□ -0.03
TCTN3-201ENST00000265993 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.87□□□□□ -0.03
TCTN3-201ENST00000265993 UHRF1BP1Q6BDS2 1440 aa14.86□□□□□ -0.03
TCTN3-201ENST00000265993 KDM5DQ9BY66 1539 aa14.86□□□□□ -0.03
TCTN3-201ENST00000265993 NBPF1Q3BBV0 1214 aa14.86□□□□□ -0.03
TCTN3-201ENST00000265993 ROCK2O75116 1388 aaKnown RBP14.85□□□□□ -0.03
TCTN3-201ENST00000265993 CCDC144AA2RUR9 1427 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms