RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 UGGT2Q9NYU1 1516 aa23.03■■□□□ 1.28
SQLE-201ENST00000265896 CNTLNQ9NXG0 1405 aa23.03■■□□□ 1.28
SQLE-201ENST00000265896 EHBP1L1Q8N3D4 1523 aa23.01■■□□□ 1.27
SQLE-201ENST00000265896 EPRSP07814 1512 aaKnown RBP23■■□□□ 1.27
SQLE-201ENST00000265896 SAMD9Q5K651 1589 aa23■■□□□ 1.27
SQLE-201ENST00000265896 PPP4R2Q9NY27 417 aa22.99■■□□□ 1.27
SQLE-201ENST00000265896 THOC2Q8NI27 1593 aaKnown RBP22.99■■□□□ 1.27
SQLE-201ENST00000265896 LAMC3Q9Y6N6 1575 aa22.96■■□□□ 1.27
SQLE-201ENST00000265896 AKNAQ7Z591 1439 aa22.95■■□□□ 1.27
SQLE-201ENST00000265896 CFDP1Q9UEE9 299 aaPredicted RBP22.95■■□□□ 1.26
SQLE-201ENST00000265896 PKD2Q13563 968 aa22.94■■□□□ 1.26
SQLE-201ENST00000265896 ANKRD30BQ9BXX2 1392 aa22.93■■□□□ 1.26
SQLE-201ENST00000265896 NBR1Q14596 966 aa22.92■■□□□ 1.26
SQLE-201ENST00000265896 ABCA5Q8WWZ7 1642 aa22.92■■□□□ 1.26
SQLE-201ENST00000265896 NCOA1Q15788 1441 aa22.92■■□□□ 1.26
SQLE-201ENST00000265896 ABCC5O15440 1437 aa22.89■■□□□ 1.25
SQLE-201ENST00000265896 DAPK1P53355 1430 aa22.88■■□□□ 1.25
SQLE-201ENST00000265896 PRG4Q92954 1404 aaPredicted RBP22.88■■□□□ 1.25
SQLE-201ENST00000265896 ZBED9Q6R2W3 1325 aa22.88■■□□□ 1.25
SQLE-201ENST00000265896 ZNF608Q9ULD9 1512 aaPredicted RBP22.86■■□□□ 1.25
SQLE-201ENST00000265896 ARHGEF11O15085 1522 aa22.85■■□□□ 1.25
SQLE-201ENST00000265896 TCOF1Q13428 1488 aaKnown RBP22.83■■□□□ 1.25
SQLE-201ENST00000265896 TMC1Q8TDI8 760 aa22.83■■□□□ 1.25
SQLE-201ENST00000265896 KIF21AQ7Z4S6 1674 aa22.83■■□□□ 1.25
SQLE-201ENST00000265896 PAK3O75914 559 aaPredicted RBP22.83■■□□□ 1.24
SQLE-201ENST00000265896 CCDC136Q96JN2 1154 aa22.83■■□□□ 1.24
SQLE-201ENST00000265896 USP47Q96K76 1375 aa22.81■■□□□ 1.24
SQLE-201ENST00000265896 RPRD2Q5VT52 1461 aaKnown RBP22.81■■□□□ 1.24
SQLE-201ENST00000265896 FANCIQ9NVI1 1328 aa22.81■■□□□ 1.24
SQLE-201ENST00000265896 CARD11Q9BXL7 1154 aa22.81■■□□□ 1.24
SQLE-201ENST00000265896 IQGAP2Q13576 1575 aa22.81■■□□□ 1.24
SQLE-201ENST00000265896 RGL3Q3MIN7 710 aa22.8■■□□□ 1.24
SQLE-201ENST00000265896 HECW1Q76N89 1606 aa22.8■■□□□ 1.24
SQLE-201ENST00000265896 ST20-MTHFSA0A0A6YYL1 179 aa22.78■■□□□ 1.24
SQLE-201ENST00000265896 TEX14Q8IWB6 1497 aa22.78■■□□□ 1.24
SQLE-201ENST00000265896 DCAF11Q8TEB1 546 aa22.78■■□□□ 1.24
SQLE-201ENST00000265896 MIA2Q96PC5 1412 aa22.77■■□□□ 1.24
SQLE-201ENST00000265896 NPM2Q86SE8 214 aaKnown RBP22.77■■□□□ 1.23
SQLE-201ENST00000265896 CHMP7Q8WUX9 453 aaPredicted RBP22.76■■□□□ 1.23
SQLE-201ENST00000265896 SPATA31E1Q6ZUB1 1445 aa22.75■■□□□ 1.23
SQLE-201ENST00000265896 GCC2Q8IWJ2 1684 aa22.74■■□□□ 1.23
SQLE-201ENST00000265896 WDR62O43379 1518 aa22.74■■□□□ 1.23
SQLE-201ENST00000265896 HNRNPMP52272 730 aaKnown RBP eCLIP22.73■■□□□ 1.231e-6■■■■■ 34.2
SQLE-201ENST00000265896 TARBP1Q13395 1621 aaKnown RBP22.73■■□□□ 1.23
SQLE-201ENST00000265896 PLB1Q6P1J6 1458 aa22.73■■□□□ 1.23
SQLE-201ENST00000265896 SKAP1Q86WV1 359 aa22.73■■□□□ 1.23
SQLE-201ENST00000265896 NUP153P49790 1475 aaKnown RBP22.72■■□□□ 1.23
SQLE-201ENST00000265896 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.72■■□□□ 1.23
SQLE-201ENST00000265896 NUP155O75694 1391 aa22.72■■□□□ 1.23
SQLE-201ENST00000265896 DHX29Q7Z478 1369 aaKnown RBP22.72■■□□□ 1.23
SQLE-201ENST00000265896 NUDCQ9Y266 331 aa22.71■■□□□ 1.23
SQLE-201ENST00000265896 PZPP20742 1482 aa22.68■■□□□ 1.22
SQLE-201ENST00000265896 PNISRQ8TF01 805 aaKnown RBP22.68■■□□□ 1.22
SQLE-201ENST00000265896 CC2D1BQ5T0F9 858 aaKnown RBP22.65■■□□□ 1.22
SQLE-201ENST00000265896 DISP1Q96F81 1524 aa22.65■■□□□ 1.22
SQLE-201ENST00000265896 ROCK1Q13464 1354 aa22.64■■□□□ 1.21
SQLE-201ENST00000265896 PLIN1O60240 522 aa22.63■■□□□ 1.21
SQLE-201ENST00000265896 EXOC6Q8TAG9 804 aa22.63■■□□□ 1.21
SQLE-201ENST00000265896 NOP58Q9Y2X3 529 aaKnown RBP22.63■■□□□ 1.21
SQLE-201ENST00000265896 CAMSAP2Q08AD1 1489 aa22.63■■□□□ 1.21
SQLE-201ENST00000265896 CDCA7LQ96GN5 454 aa22.62■■□□□ 1.21
SQLE-201ENST00000265896 DEKP35659 375 aaKnown RBP22.62■■□□□ 1.21
SQLE-201ENST00000265896 NBPF1Q3BBV0 1214 aa22.62■■□□□ 1.21
SQLE-201ENST00000265896 ERICH6BQ5W0A0 696 aa22.62■■□□□ 1.21
SQLE-201ENST00000265896 PBRM1Q86U86 1689 aa22.62■■□□□ 1.21
SQLE-201ENST00000265896 ADAMTS12P58397 1594 aa22.62■■□□□ 1.21
SQLE-201ENST00000265896 BCORL1Q5H9F3 1711 aa22.61■■□□□ 1.21
SQLE-201ENST00000265896 PLEKHD1A6NEE1 506 aa22.59■■□□□ 1.21
SQLE-201ENST00000265896 TSPY4P0CV99 314 aa22.59■■□□□ 1.21
SQLE-201ENST00000265896 TSPY10P0CW01 314 aa22.59■■□□□ 1.21
SQLE-201ENST00000265896 KIAA1107Q9UPP5 1409 aa22.59■■□□□ 1.21
SQLE-201ENST00000265896 JPH4Q96JJ6 628 aa22.59■■□□□ 1.21
SQLE-201ENST00000265896 ANKRD50Q9ULJ7 1429 aa22.59■■□□□ 1.21
SQLE-201ENST00000265896 DNMT1P26358 1616 aaKnown RBP22.57■■□□□ 1.2
SQLE-201ENST00000265896 GPATCH8Q9UKJ3 1502 aaKnown RBP22.57■■□□□ 1.2
SQLE-201ENST00000265896 SMG6Q86US8 1419 aaKnown RBP22.56■■□□□ 1.2
SQLE-201ENST00000265896 ANKRD30AQ9BXX3 1397 aa22.56■■□□□ 1.2
SQLE-201ENST00000265896 KIF14Q15058 1648 aa22.55■■□□□ 1.2
SQLE-201ENST00000265896 TROQ12816 1431 aaPredicted RBP22.55■■□□□ 1.2
SQLE-201ENST00000265896 KIAA0586Q9BVV6 1533 aa22.53■■□□□ 1.2
SQLE-201ENST00000265896 ROCK2O75116 1388 aaKnown RBP22.52■■□□□ 1.2
SQLE-201ENST00000265896 KIAA0556O60303 1618 aa22.52■■□□□ 1.2
SQLE-201ENST00000265896 ANP32AP39687 249 aaKnown RBP22.52■■□□□ 1.2
SQLE-201ENST00000265896 MRC2Q9UBG0 1479 aa22.51■■□□□ 1.19
SQLE-201ENST00000265896 LAS1LQ9Y4W2 734 aaKnown RBP22.5■■□□□ 1.19
SQLE-201ENST00000265896 RAPGEF6Q8TEU7 1601 aa22.49■■□□□ 1.19
SQLE-201ENST00000265896 RCAN3Q9UKA8 241 aa22.48■■□□□ 1.19
SQLE-201ENST00000265896 GRIN2AQ12879 1464 aa22.48■■□□□ 1.19
SQLE-201ENST00000265896 ZBTB47Q9UFB7 747 aaPredicted RBP22.47■■□□□ 1.19
SQLE-201ENST00000265896 RRP1P56182 461 aaKnown RBP22.47■■□□□ 1.19
SQLE-201ENST00000265896 MYBBP1AQ9BQG0 1328 aaKnown RBP22.45■■□□□ 1.18
SQLE-201ENST00000265896 KIF15Q9NS87 1388 aa22.45■■□□□ 1.18
SQLE-201ENST00000265896 C9orf84Q5VXU9 1444 aa22.44■■□□□ 1.18
SQLE-201ENST00000265896 IPO9Q96P70 1041 aaKnown RBP22.43■■□□□ 1.18
SQLE-201ENST00000265896 MBD5Q9P267 1494 aa22.43■■□□□ 1.18
SQLE-201ENST00000265896 PANK3Q9H999 370 aa22.41■■□□□ 1.18
SQLE-201ENST00000265896 RNF123Q5XPI4 1314 aa22.4■■□□□ 1.18
SQLE-201ENST00000265896 KDM5CP41229 1560 aa22.38■■□□□ 1.17
SQLE-201ENST00000265896 C20orf194Q5TEA3 1177 aa22.38■■□□□ 1.17
SQLE-201ENST00000265896 ERCC6Q03468 1493 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms