RNA–Protein interactions for RNA: ENST00000265379.10

COL6A5-201, Transcript of collagen type VI alpha 5 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A5, Length 9,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-201ENST00000265379 NESP48681 1621 aa10.96□□□□□ -0.66
COL6A5-201ENST00000265379 KIF14Q15058 1648 aa10.95□□□□□ -0.66
COL6A5-201ENST00000265379 HSP90AA1P07900 732 aaKnown RBP10.94□□□□□ -0.66
COL6A5-201ENST00000265379 ADAMTS12P58397 1594 aa10.94□□□□□ -0.66
COL6A5-201ENST00000265379 GRIN2AQ12879 1464 aa10.94□□□□□ -0.66
COL6A5-201ENST00000265379 ABCA5Q8WWZ7 1642 aa10.93□□□□□ -0.66
COL6A5-201ENST00000265379 TRIM44Q96DX7 344 aaPredicted RBP10.93□□□□□ -0.66
COL6A5-201ENST00000265379 BCANQ96GW7 911 aa10.93□□□□□ -0.66
COL6A5-201ENST00000265379 NGEFQ8N5V2 710 aa10.93□□□□□ -0.66
COL6A5-201ENST00000265379 UGGT2Q9NYU1 1516 aa10.93□□□□□ -0.66
COL6A5-201ENST00000265379 CHMP4BQ9H444 224 aaKnown RBP10.93□□□□□ -0.66
COL6A5-201ENST00000265379 ZNF326Q5BKZ1 582 aaKnown RBP10.92□□□□□ -0.66
COL6A5-201ENST00000265379 JPH4Q96JJ6 628 aa10.92□□□□□ -0.66
COL6A5-201ENST00000265379 PCF11O94913 1555 aaKnown RBP10.91□□□□□ -0.66
COL6A5-201ENST00000265379 EPRSP07814 1512 aaKnown RBP10.91□□□□□ -0.66
COL6A5-201ENST00000265379 URB2Q14146 1524 aaKnown RBP10.9□□□□□ -0.66
COL6A5-201ENST00000265379 PNNQ9H307 717 aaKnown RBP10.9□□□□□ -0.66
COL6A5-201ENST00000265379 UPF2Q9HAU5 1272 aaKnown RBP10.9□□□□□ -0.66
COL6A5-201ENST00000265379 PBRM1Q86U86 1689 aa10.9□□□□□ -0.66
COL6A5-201ENST00000265379 DHX57Q6P158 1386 aaKnown RBP10.9□□□□□ -0.66
COL6A5-201ENST00000265379 SNAPC4Q5SXM2 1469 aa10.89□□□□□ -0.67
COL6A5-201ENST00000265379 HAP1P54257 671 aaPredicted RBP10.89□□□□□ -0.67
COL6A5-201ENST00000265379 CFAP53Q96M91 514 aa10.88□□□□□ -0.67
COL6A5-201ENST00000265379 CCDC144AA2RUR9 1427 aa10.87□□□□□ -0.67
COL6A5-201ENST00000265379 PLPPR3Q6T4P5 718 aa10.87□□□□□ -0.67
COL6A5-201ENST00000265379 RRP7BPQ9NSQ0 103 aa10.87□□□□□ -0.67
COL6A5-201ENST00000265379 RALBP1Q15311 655 aa10.87□□□□□ -0.67
COL6A5-201ENST00000265379 STAG3Q9UJ98 1225 aa10.87□□□□□ -0.67
COL6A5-201ENST00000265379 CCDC141Q6ZP82 1450 aa10.87□□□□□ -0.67
COL6A5-201ENST00000265379 CHIC2Q9UKJ5 165 aa10.87□□□□□ -0.67
COL6A5-201ENST00000265379 MS4A1P11836 297 aa10.86□□□□□ -0.67
COL6A5-201ENST00000265379 TMC1Q8TDI8 760 aa10.86□□□□□ -0.67
COL6A5-201ENST00000265379 SHANK2Q9UPX8 1470 aa10.86□□□□□ -0.67
COL6A5-201ENST00000265379 CHMP4AQ9BY43 222 aa10.86□□□□□ -0.67
COL6A5-201ENST00000265379 PTPN23Q9H3S7 1636 aa10.86□□□□□ -0.67
COL6A5-201ENST00000265379 NUP155O75694 1391 aa10.85□□□□□ -0.67
COL6A5-201ENST00000265379 RAPGEF6Q8TEU7 1601 aa10.85□□□□□ -0.67
COL6A5-201ENST00000265379 SAMD9Q5K651 1589 aa10.85□□□□□ -0.67
COL6A5-201ENST00000265379 WDR43Q15061 677 aaKnown RBP eCLIP10.84□□□□□ -0.67
COL6A5-201ENST00000265379 KANK4Q5T7N3 995 aaPredicted RBP10.84□□□□□ -0.67
COL6A5-201ENST00000265379 TMF1P82094 1093 aa10.84□□□□□ -0.67
COL6A5-201ENST00000265379 KNSTRNQ9Y448 316 aa10.83□□□□□ -0.68
COL6A5-201ENST00000265379 GTF3C3Q9Y5Q9 886 aa10.83□□□□□ -0.68
COL6A5-201ENST00000265379 CARD11Q9BXL7 1154 aa10.82□□□□□ -0.68
COL6A5-201ENST00000265379 NPM2Q86SE8 214 aaKnown RBP10.82□□□□□ -0.68
COL6A5-201ENST00000265379 MPHOSPH9Q99550 1183 aa10.82□□□□□ -0.68
COL6A5-201ENST00000265379 SPAG9O60271 1321 aaKnown RBP10.82□□□□□ -0.68
COL6A5-201ENST00000265379 MRS2Q9HD23 443 aa10.81□□□□□ -0.68
COL6A5-201ENST00000265379 WASHC2AQ641Q2 1341 aa10.81□□□□□ -0.68
COL6A5-201ENST00000265379 WASHC2CQ9Y4E1 1318 aa10.81□□□□□ -0.68
COL6A5-201ENST00000265379 PPP1R15AO75807 674 aaPredicted RBP10.81□□□□□ -0.68
COL6A5-201ENST00000265379 ANKRD50Q9ULJ7 1429 aa10.81□□□□□ -0.68
COL6A5-201ENST00000265379 KIAA0556O60303 1618 aa10.81□□□□□ -0.68
COL6A5-201ENST00000265379 DAPK1P53355 1430 aa10.81□□□□□ -0.68
COL6A5-201ENST00000265379 CNTLNQ9NXG0 1405 aa10.8□□□□□ -0.68
COL6A5-201ENST00000265379 CFAP44Q96MT7 982 aa10.8□□□□□ -0.68
COL6A5-201ENST00000265379 PRG4Q92954 1404 aaPredicted RBP10.8□□□□□ -0.68
COL6A5-201ENST00000265379 ARID3CA6NKF2 412 aa10.79□□□□□ -0.68
COL6A5-201ENST00000265379 SCAF1Q9H7N4 1312 aaKnown RBP10.79□□□□□ -0.68
COL6A5-201ENST00000265379 ARHGAP5Q13017 1502 aa10.79□□□□□ -0.68
COL6A5-201ENST00000265379 KIF15Q9NS87 1388 aa10.79□□□□□ -0.68
COL6A5-201ENST00000265379 TCOF1Q13428 1488 aaKnown RBP10.79□□□□□ -0.68
COL6A5-201ENST00000265379 CALRP27797 417 aaKnown RBP10.78□□□□□ -0.68
COL6A5-201ENST00000265379 PDE3BQ13370 1112 aa10.78□□□□□ -0.68
COL6A5-201ENST00000265379 OSCARQ8IYS5 282 aa10.78□□□□□ -0.68
COL6A5-201ENST00000265379 C9orf84Q5VXU9 1444 aa10.77□□□□□ -0.68
COL6A5-201ENST00000265379 HNRNPUQ00839 825 aaKnown RBP eCLIP10.77□□□□□ -0.69
COL6A5-201ENST00000265379 DDX10Q13206 875 aaKnown RBP10.77□□□□□ -0.69
COL6A5-201ENST00000265379 NUDCQ9Y266 331 aa10.76□□□□□ -0.69
COL6A5-201ENST00000265379 EIF4G3O43432 1585 aaKnown RBP10.75□□□□□ -0.69
COL6A5-201ENST00000265379 PKD2Q13563 968 aa10.75□□□□□ -0.69
COL6A5-201ENST00000265379 CALD1Q05682 793 aaKnown RBP10.75□□□□□ -0.69
COL6A5-201ENST00000265379 CFAP74Q9C0B2 1584 aa10.75□□□□□ -0.69
COL6A5-201ENST00000265379 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.75□□□□□ -0.69
COL6A5-201ENST00000265379 KIAA1107Q9UPP5 1409 aa10.74□□□□□ -0.69
COL6A5-201ENST00000265379 KCNH8Q96L42 1107 aa10.74□□□□□ -0.69
COL6A5-201ENST00000265379 TARBP1Q13395 1621 aaKnown RBP10.74□□□□□ -0.69
COL6A5-201ENST00000265379 ADGBQ8N7X0 1667 aa10.73□□□□□ -0.69
COL6A5-201ENST00000265379 EIF2AK4Q9P2K8 1649 aaKnown RBP10.73□□□□□ -0.69
COL6A5-201ENST00000265379 NUP160Q12769 1436 aa10.73□□□□□ -0.69
COL6A5-201ENST00000265379 ARHGEF12Q9NZN5 1544 aa10.73□□□□□ -0.69
COL6A5-201ENST00000265379 CAMSAP2Q08AD1 1489 aa10.72□□□□□ -0.69
COL6A5-201ENST00000265379 AAMPQ13685 434 aa10.72□□□□□ -0.69
COL6A5-201ENST00000265379 PTMSP20962 102 aa10.72□□□□□ -0.69
COL6A5-201ENST00000265379 ANP32EQ9BTT0 268 aa10.72□□□□□ -0.69
COL6A5-201ENST00000265379 GCC2Q8IWJ2 1684 aa10.72□□□□□ -0.69
COL6A5-201ENST00000265379 PLB1Q6P1J6 1458 aa10.71□□□□□ -0.7
COL6A5-201ENST00000265379 TEX14Q8IWB6 1497 aa10.7□□□□□ -0.7
COL6A5-201ENST00000265379 PPP6R1Q9UPN7 881 aa10.7□□□□□ -0.7
COL6A5-201ENST00000265379 SENP3Q9H4L4 574 aaPredicted RBP10.69□□□□□ -0.7
COL6A5-201ENST00000265379 ERBINQ96RT1 1412 aa10.69□□□□□ -0.7
COL6A5-201ENST00000265379 RPGRIP1LQ68CZ1 1315 aa10.69□□□□□ -0.7
COL6A5-201ENST00000265379 DNMT1P26358 1616 aaKnown RBP10.69□□□□□ -0.7
COL6A5-201ENST00000265379 MYH16Q9H6N6 1097 aa10.68□□□□□ -0.7
COL6A5-201ENST00000265379 ANKRD30BQ9BXX2 1392 aa10.68□□□□□ -0.7
COL6A5-201ENST00000265379 NAIPQ13075 1403 aa10.68□□□□□ -0.7
COL6A5-201ENST00000265379 NLRP13Q86W25 1043 aa10.68□□□□□ -0.7
COL6A5-201ENST00000265379 MIER1Q8N108 512 aa10.67□□□□□ -0.7
COL6A5-201ENST00000265379 DUOX2Q9NRD8 1548 aa10.67□□□□□ -0.7
COL6A5-201ENST00000265379 DDRGK1Q96HY6 314 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms