RNA–Protein interactions for RNA: ENST00000265334.8

CDKL3-201, Transcript of cyclin dependent kinase like 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDKL3, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-201ENST00000265334 ZCCHC11Q5TAX3 1644 aaKnown RBP17.24■□□□□ 0.35
CDKL3-201ENST00000265334 DNMT1P26358 1616 aaKnown RBP17.24■□□□□ 0.35
CDKL3-201ENST00000265334 MIER1Q8N108 512 aa17.23■□□□□ 0.35
CDKL3-201ENST00000265334 CFDP1Q9UEE9 299 aaPredicted RBP17.23■□□□□ 0.35
CDKL3-201ENST00000265334 CAMSAP2Q08AD1 1489 aa17.21■□□□□ 0.35
CDKL3-201ENST00000265334 KDM6BO15054 1643 aa17.21■□□□□ 0.35
CDKL3-201ENST00000265334 DAPK1P53355 1430 aa17.21■□□□□ 0.34
CDKL3-201ENST00000265334 ROCK1Q13464 1354 aa17.2■□□□□ 0.34
CDKL3-201ENST00000265334 NEUROD1Q13562 356 aa17.19■□□□□ 0.34
CDKL3-201ENST00000265334 ABCC5O15440 1437 aa17.19■□□□□ 0.34
CDKL3-201ENST00000265334 ZNF644Q9H582 1327 aaPredicted RBP17.19■□□□□ 0.34
CDKL3-201ENST00000265334 RRP7BPQ9NSQ0 103 aa17.18■□□□□ 0.34
CDKL3-201ENST00000265334 PREX2Q70Z35 1606 aa17.18■□□□□ 0.34
CDKL3-201ENST00000265334 CHIC2Q9UKJ5 165 aa17.18■□□□□ 0.34
CDKL3-201ENST00000265334 DENND4BO75064 1496 aaPredicted RBP17.17■□□□□ 0.34
CDKL3-201ENST00000265334 PPP1R15AO75807 674 aaPredicted RBP17.17■□□□□ 0.34
CDKL3-201ENST00000265334 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.17■□□□□ 0.34
CDKL3-201ENST00000265334 ACIN1Q9UKV3 1341 aaKnown RBP17.15■□□□□ 0.34
CDKL3-201ENST00000265334 TTC37Q6PGP7 1564 aa17.15■□□□□ 0.34
CDKL3-201ENST00000265334 CDC42BPBQ9Y5S2 1711 aa17.15■□□□□ 0.34
CDKL3-201ENST00000265334 CROCC2H7BZ55 1655 aa17.14■□□□□ 0.33
CDKL3-201ENST00000265334 MYO5CQ9NQX4 1742 aa17.12■□□□□ 0.33
CDKL3-201ENST00000265334 CENPBP07199 599 aaPredicted RBP17.11■□□□□ 0.33
CDKL3-201ENST00000265334 ARHGEF5Q12774 1597 aa17.11■□□□□ 0.33
CDKL3-201ENST00000265334 ADGBQ8N7X0 1667 aa17.11■□□□□ 0.33
CDKL3-201ENST00000265334 SCAF1Q9H7N4 1312 aaKnown RBP17.11■□□□□ 0.33
CDKL3-201ENST00000265334 ADGRL2O95490 1459 aa17.1■□□□□ 0.33
CDKL3-201ENST00000265334 ZNF777Q9ULD5 760 aaPredicted RBP17.1■□□□□ 0.33
CDKL3-201ENST00000265334 SHANK2Q9UPX8 1470 aa17.1■□□□□ 0.33
CDKL3-201ENST00000265334 SAMD9LQ8IVG5 1584 aa17.1■□□□□ 0.33
CDKL3-201ENST00000265334 WDR7Q9Y4E6 1490 aa17.09■□□□□ 0.33
CDKL3-201ENST00000265334 TONSLQ96HA7 1378 aa17.09■□□□□ 0.33
CDKL3-201ENST00000265334 MBD5Q9P267 1494 aa17.07■□□□□ 0.32
CDKL3-201ENST00000265334 PLCH2O75038 1416 aa17.07■□□□□ 0.32
CDKL3-201ENST00000265334 NCOA1Q15788 1441 aa17.07■□□□□ 0.32
CDKL3-201ENST00000265334 ARHGAP5Q13017 1502 aa17.07■□□□□ 0.32
CDKL3-201ENST00000265334 ARAP3Q8WWN8 1544 aa17.06■□□□□ 0.32
CDKL3-201ENST00000265334 KCNH8Q96L42 1107 aa17.06■□□□□ 0.32
CDKL3-201ENST00000265334 RSPH4AQ5TD94 716 aa17.05■□□□□ 0.32
CDKL3-201ENST00000265334 MPHOSPH9Q99550 1183 aa17.05■□□□□ 0.32
CDKL3-201ENST00000265334 PLEKHH2Q8IVE3 1493 aa17.05■□□□□ 0.32
CDKL3-201ENST00000265334 TRIM52Q96A61 297 aa17.04■□□□□ 0.32
CDKL3-201ENST00000265334 KIAA1107Q9UPP5 1409 aa17.04■□□□□ 0.32
CDKL3-201ENST00000265334 ASXL2Q76L83 1435 aa17.03■□□□□ 0.32
CDKL3-201ENST00000265334 CCDC141Q6ZP82 1450 aa17.03■□□□□ 0.32
CDKL3-201ENST00000265334 ANKRD30AQ9BXX3 1397 aa17.02■□□□□ 0.32
CDKL3-201ENST00000265334 C9orf84Q5VXU9 1444 aa17.02■□□□□ 0.32
CDKL3-201ENST00000265334 ABCA9Q8IUA7 1624 aa17.02■□□□□ 0.32
CDKL3-201ENST00000265334 SYCP2Q9BX26 1530 aa17■□□□□ 0.31
CDKL3-201ENST00000265334 NPM1P06748 294 aaKnown RBP eCLIP17■□□□□ 0.31
CDKL3-201ENST00000265334 ANKRD30BQ9BXX2 1392 aa17■□□□□ 0.31
CDKL3-201ENST00000265334 MAST1Q9Y2H9 1570 aa17■□□□□ 0.31
CDKL3-201ENST00000265334 TSPY4P0CV99 314 aa16.99■□□□□ 0.31
CDKL3-201ENST00000265334 TSPY10P0CW01 314 aa16.99■□□□□ 0.31
CDKL3-201ENST00000265334 HNRNPMP52272 730 aaKnown RBP eCLIP16.99■□□□□ 0.31
CDKL3-201ENST00000265334 EFCAB2Q5VUJ9 269 aa16.99■□□□□ 0.31
CDKL3-201ENST00000265334 PZPP20742 1482 aa16.98■□□□□ 0.31
CDKL3-201ENST00000265334 ABCC1P33527 1531 aa16.97■□□□□ 0.31
CDKL3-201ENST00000265334 RIMBP3CA6NJZ7 1639 aa16.96■□□□□ 0.31
CDKL3-201ENST00000265334 RIMBP3BA6NNM3 1639 aa16.96■□□□□ 0.31
CDKL3-201ENST00000265334 RIMBP3Q9UFD9 1639 aa16.96■□□□□ 0.31
CDKL3-201ENST00000265334 YTHDC1Q96MU7 727 aaKnown RBP16.95■□□□□ 0.3
CDKL3-201ENST00000265334 RPRD2Q5VT52 1461 aaKnown RBP16.95■□□□□ 0.3
CDKL3-201ENST00000265334 ARHGEF12Q9NZN5 1544 aa16.95■□□□□ 0.3
CDKL3-201ENST00000265334 ANKRD50Q9ULJ7 1429 aa16.94■□□□□ 0.3
CDKL3-201ENST00000265334 PLXNC1O60486 1568 aa16.92■□□□□ 0.3
CDKL3-201ENST00000265334 FOXD1Q16676 465 aa16.91■□□□□ 0.3
CDKL3-201ENST00000265334 KIF15Q9NS87 1388 aa16.91■□□□□ 0.3
CDKL3-201ENST00000265334 SLC4A1APQ9BWU0 796 aaKnown RBP16.91■□□□□ 0.3
CDKL3-201ENST00000265334 TEX14Q8IWB6 1497 aa16.9■□□□□ 0.3
CDKL3-201ENST00000265334 FANCAO15360 1455 aa16.9■□□□□ 0.3
CDKL3-201ENST00000265334 DDX10Q13206 875 aaKnown RBP16.89■□□□□ 0.29
CDKL3-201ENST00000265334 L3MBTL2Q969R5 705 aa16.89■□□□□ 0.29
CDKL3-201ENST00000265334 KDM5DQ9BY66 1539 aa16.88■□□□□ 0.29
CDKL3-201ENST00000265334 HIRIP3Q9BW71 556 aaPredicted RBP16.87■□□□□ 0.29
CDKL3-201ENST00000265334 TRAPPC8Q9Y2L5 1435 aa16.87■□□□□ 0.29
CDKL3-201ENST00000265334 GTF3C3Q9Y5Q9 886 aa16.87■□□□□ 0.29
CDKL3-201ENST00000265334 CYB5RLQ6IPT4 315 aa16.86■□□□□ 0.29
CDKL3-201ENST00000265334 RTEL1-TNFRSF6BF6WH68 1400 aa16.85■□□□□ 0.29
CDKL3-201ENST00000265334 CFAP74Q9C0B2 1584 aa16.84■□□□□ 0.29
CDKL3-201ENST00000265334 DUOX2Q9NRD8 1548 aa16.84■□□□□ 0.29
CDKL3-201ENST00000265334 CD109Q6YHK3 1445 aa16.83■□□□□ 0.28
CDKL3-201ENST00000265334 ADGRL1O94910 1474 aa16.82■□□□□ 0.28
CDKL3-201ENST00000265334 ZFYVE16Q7Z3T8 1539 aa16.82■□□□□ 0.28
CDKL3-201ENST00000265334 ERBINQ96RT1 1412 aa16.8■□□□□ 0.28
CDKL3-201ENST00000265334 SCAPERQ9BY12 1400 aa16.8■□□□□ 0.28
CDKL3-201ENST00000265334 UNC13BO14795 1591 aa16.8■□□□□ 0.28
CDKL3-201ENST00000265334 GLI2P10070 1586 aa16.8■□□□□ 0.28
CDKL3-201ENST00000265334 PKD2Q13563 968 aa16.8■□□□□ 0.28
CDKL3-201ENST00000265334 INO80Q9ULG1 1556 aaPredicted RBP16.8■□□□□ 0.28
CDKL3-201ENST00000265334 SPAG9O60271 1321 aaKnown RBP16.79■□□□□ 0.28
CDKL3-201ENST00000265334 HSPA5P11021 654 aaKnown RBP16.79■□□□□ 0.28
CDKL3-201ENST00000265334 NBPF8Q3BBV2 869 aa16.79■□□□□ 0.28
CDKL3-201ENST00000265334 NUP155O75694 1391 aa16.79■□□□□ 0.28
CDKL3-201ENST00000265334 AFAP1Q8N556 730 aa16.78■□□□□ 0.28
CDKL3-201ENST00000265334 EIF4G2P78344 907 aaKnown RBP eCLIP16.77■□□□□ 0.28
CDKL3-201ENST00000265334 MAP3K4Q9Y6R4 1608 aa16.77■□□□□ 0.27
CDKL3-201ENST00000265334 NEO1Q92859 1461 aa16.77■□□□□ 0.27
CDKL3-201ENST00000265334 ATP7AQ04656 1500 aa16.76■□□□□ 0.27
CDKL3-201ENST00000265334 MAGI2Q86UL8 1455 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms