RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 PMFBP1Q8TBY8 1022 aa6.8□□□□□ -1.32
XRN1-201ENST00000264951 TPM2P07951 284 aa6.8□□□□□ -1.32
XRN1-201ENST00000264951 CAGE1Q8TC20 777 aa6.8□□□□□ -1.32
XRN1-201ENST00000264951 ST18O60284 1047 aa6.79□□□□□ -1.32
XRN1-201ENST00000264951 IPO9Q96P70 1041 aaKnown RBP6.79□□□□□ -1.32
XRN1-201ENST00000264951 FBLN2P98095 1184 aa6.79□□□□□ -1.32
XRN1-201ENST00000264951 TAF3Q5VWG9 929 aa6.79□□□□□ -1.32
XRN1-201ENST00000264951 AK7Q96M32 723 aa6.79□□□□□ -1.32
XRN1-201ENST00000264951 PDE3BQ13370 1112 aa6.79□□□□□ -1.32
XRN1-201ENST00000264951 CLIP1P30622 1438 aa6.79□□□□□ -1.32
XRN1-201ENST00000264951 PPP1R15AO75807 674 aaPredicted RBP6.79□□□□□ -1.32
XRN1-201ENST00000264951 RDXP35241 583 aaKnown RBP6.78□□□□□ -1.32
XRN1-201ENST00000264951 ANKRD20A12PQ8NF67 263 aa6.78□□□□□ -1.32
XRN1-201ENST00000264951 ERCC4Q92889 916 aaPredicted RBP6.78□□□□□ -1.32
XRN1-201ENST00000264951 HSP90B2PQ58FF3 399 aa6.78□□□□□ -1.32
XRN1-201ENST00000264951 USP8P40818 1118 aa6.78□□□□□ -1.32
XRN1-201ENST00000264951 ABCC9O60706 1549 aa6.78□□□□□ -1.32
XRN1-201ENST00000264951 RBM19Q9Y4C8 960 aaKnown RBP6.78□□□□□ -1.32
XRN1-201ENST00000264951 APPP05067 770 aa6.77□□□□□ -1.33
XRN1-201ENST00000264951 NEXNQ0ZGT2 675 aa6.77□□□□□ -1.33
XRN1-201ENST00000264951 MYO6Q9UM54 1294 aa6.77□□□□□ -1.33
XRN1-201ENST00000264951 CLSTN1O94985 981 aa6.77□□□□□ -1.33
XRN1-201ENST00000264951 HOOK1Q9UJC3 728 aaKnown RBP6.77□□□□□ -1.33
XRN1-201ENST00000264951 ZNF771Q7L3S4 317 aaPredicted RBP6.77□□□□□ -1.33
XRN1-201ENST00000264951 NGEFQ8N5V2 710 aa6.77□□□□□ -1.33
XRN1-201ENST00000264951 DIAPH3Q9NSV4 1193 aa6.77□□□□□ -1.33
XRN1-201ENST00000264951 NAP1L2Q9ULW6 460 aaPredicted RBP6.77□□□□□ -1.33
XRN1-201ENST00000264951 IRX6P78412 446 aaPredicted RBP6.76□□□□□ -1.33
XRN1-201ENST00000264951 HMGN5P82970 282 aaKnown RBP6.76□□□□□ -1.33
XRN1-201ENST00000264951 GOLGA6L19H0YKK7 550 aa6.76□□□□□ -1.33
XRN1-201ENST00000264951 HDGFP51858 240 aaKnown RBP6.76□□□□□ -1.33
XRN1-201ENST00000264951 LRRFIP1Q32MZ4 808 aaKnown RBP6.76□□□□□ -1.33
XRN1-201ENST00000264951 CAVIN1Q6NZI2 390 aaKnown RBP6.76□□□□□ -1.33
XRN1-201ENST00000264951 WWC1Q8IX03 1113 aa6.76□□□□□ -1.33
XRN1-201ENST00000264951 ISY1Q9ULR0 285 aaKnown RBP6.76□□□□□ -1.33
XRN1-201ENST00000264951 AAMPQ13685 434 aa6.76□□□□□ -1.33
XRN1-201ENST00000264951 RALBP1Q15311 655 aa6.75□□□□□ -1.33
XRN1-201ENST00000264951 STK11IPQ8N1F8 1099 aa6.75□□□□□ -1.33
XRN1-201ENST00000264951 INCENPQ9NQS7 918 aa6.75□□□□□ -1.33
XRN1-201ENST00000264951 CCP110O43303 1012 aa6.75□□□□□ -1.33
XRN1-201ENST00000264951 ZRSR2Q15696 482 aaKnown RBP6.75□□□□□ -1.33
XRN1-201ENST00000264951 GOLGA6L7A0A1B0GV03 622 aa6.75□□□□□ -1.33
XRN1-201ENST00000264951 CARD11Q9BXL7 1154 aa6.75□□□□□ -1.33
XRN1-201ENST00000264951 TMF1P82094 1093 aa6.75□□□□□ -1.33
XRN1-201ENST00000264951 FRAT1Q92837 279 aaPredicted RBP6.75□□□□□ -1.33
XRN1-201ENST00000264951 RUFY1Q96T51 708 aa6.75□□□□□ -1.33
XRN1-201ENST00000264951 TSPYL1Q9H0U9 437 aa6.75□□□□□ -1.33
XRN1-201ENST00000264951 ROCK2O75116 1388 aaKnown RBP6.75□□□□□ -1.33
XRN1-201ENST00000264951 VSIG10Q8N0Z9 540 aa6.74□□□□□ -1.33
XRN1-201ENST00000264951 MYO15BQ96JP2 1530 aa6.74□□□□□ -1.33
XRN1-201ENST00000264951 AMER1Q5JTC6 1135 aaPredicted RBP6.74□□□□□ -1.33
XRN1-201ENST00000264951 GOLGA3Q08378 1498 aa6.74□□□□□ -1.33
XRN1-201ENST00000264951 CCDC47Q96A33 483 aaKnown RBP6.74□□□□□ -1.33
XRN1-201ENST00000264951 KTN1Q86UP2 1357 aaKnown RBP6.74□□□□□ -1.33
XRN1-201ENST00000264951 BECN2A8MW95 431 aa6.73□□□□□ -1.33
XRN1-201ENST00000264951 GSE1Q14687 1217 aa6.73□□□□□ -1.33
XRN1-201ENST00000264951 NPHP1O15259 732 aa6.73□□□□□ -1.33
XRN1-201ENST00000264951 KDM2AQ9Y2K7 1162 aa6.73□□□□□ -1.33
XRN1-201ENST00000264951 CCDC173Q0VFZ6 552 aa6.73□□□□□ -1.33
XRN1-201ENST00000264951 CPLX2Q6PUV4 134 aaKnown RBP6.73□□□□□ -1.33
XRN1-201ENST00000264951 LMOD3Q0VAK6 560 aa6.72□□□□□ -1.33
XRN1-201ENST00000264951 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.72□□□□□ -1.33
XRN1-201ENST00000264951 RASSF8Q8NHQ8 419 aa6.72□□□□□ -1.33
XRN1-201ENST00000264951 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.71□□□□□ -1.332e-6■■■□□ 15.9
XRN1-201ENST00000264951 TXLNBQ8N3L3 684 aa6.71□□□□□ -1.33
XRN1-201ENST00000264951 PRM3Q9NNZ6 103 aa6.71□□□□□ -1.33
XRN1-201ENST00000264951 FHAD1B1AJZ9 1412 aa6.71□□□□□ -1.33
XRN1-201ENST00000264951 EIF3AQ14152 1382 aaKnown RBP6.71□□□□□ -1.34
XRN1-201ENST00000264951 P3H3Q8IVL6 736 aa6.71□□□□□ -1.34
XRN1-201ENST00000264951 KANK1Q14678 1352 aa6.71□□□□□ -1.34
XRN1-201ENST00000264951 H0YHG0 523 aa6.71□□□□□ -1.34
XRN1-201ENST00000264951 SF3A1Q15459 793 aaKnown RBP6.71□□□□□ -1.34
XRN1-201ENST00000264951 FAM43AQ8N2R8 423 aa6.71□□□□□ -1.34
XRN1-201ENST00000264951 RTF1Q92541 710 aaKnown RBP6.71□□□□□ -1.34
XRN1-201ENST00000264951 TULP1O00294 542 aaPredicted RBP6.7□□□□□ -1.34
XRN1-201ENST00000264951 PLEKHD1A6NEE1 506 aa6.7□□□□□ -1.34
XRN1-201ENST00000264951 TPD52L1Q16890 204 aaPredicted RBP6.7□□□□□ -1.34
XRN1-201ENST00000264951 TMX4Q9H1E5 349 aaPredicted RBP6.7□□□□□ -1.34
XRN1-201ENST00000264951 FANCIQ9NVI1 1328 aa6.7□□□□□ -1.34
XRN1-201ENST00000264951 NEFHP12036 1026 aa6.7□□□□□ -1.34
XRN1-201ENST00000264951 RCAN3Q9UKA8 241 aa6.7□□□□□ -1.34
XRN1-201ENST00000264951 REC8O95072 547 aa6.7□□□□□ -1.34
XRN1-201ENST00000264951 C14orf37Q86TY3 774 aa6.7□□□□□ -1.34
XRN1-201ENST00000264951 NAT10Q9H0A0 1025 aaKnown RBP6.7□□□□□ -1.34
XRN1-201ENST00000264951 SPAG9O60271 1321 aaKnown RBP6.69□□□□□ -1.34
XRN1-201ENST00000264951 B4GALNT3Q6L9W6 998 aa6.69□□□□□ -1.34
XRN1-201ENST00000264951 STK31Q9BXU1 1019 aa6.69□□□□□ -1.34
XRN1-201ENST00000264951 TPRNQ4KMQ1 711 aa6.69□□□□□ -1.34
XRN1-201ENST00000264951 PDCL2Q8N4E4 241 aa6.69□□□□□ -1.34
XRN1-201ENST00000264951 POGKQ9P215 609 aa6.69□□□□□ -1.34
XRN1-201ENST00000264951 LETM1O95202 739 aaPredicted RBP6.68□□□□□ -1.34
XRN1-201ENST00000264951 NACADO15069 1562 aa6.68□□□□□ -1.34
XRN1-201ENST00000264951 MNS1Q8NEH6 495 aa6.68□□□□□ -1.34
XRN1-201ENST00000264951 NUCB2P80303 420 aa6.68□□□□□ -1.34
XRN1-201ENST00000264951 ANKRD18AQ8IVF6 992 aa6.68□□□□□ -1.34
XRN1-201ENST00000264951 CEP162Q5TB80 1403 aa6.68□□□□□ -1.34
XRN1-201ENST00000264951 PDIA4P13667 645 aaKnown RBP6.68□□□□□ -1.34
XRN1-201ENST00000264951 PIP4K2AP48426 406 aaPredicted RBP6.68□□□□□ -1.34
XRN1-201ENST00000264951 KIF7Q2M1P5 1343 aa6.68□□□□□ -1.34
XRN1-201ENST00000264951 LEKR1Q6ZMV7 388 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms