RNA–Protein interactions for RNA: ENST00000264932.10

SDHA-201, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHA, Length 2,390 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-201ENST00000264932 ROCK1Q13464 1354 aa27.35■■□□□ 1.97
SDHA-201ENST00000264932 EIF4G3O43432 1585 aaKnown RBP27.34■■□□□ 1.97
SDHA-201ENST00000264932 ANKRD30BQ9BXX2 1392 aa27.33■■□□□ 1.97
SDHA-201ENST00000264932 C11orf95C9JLR9 678 aaPredicted RBP27.32■■□□□ 1.96
SDHA-201ENST00000264932 GRIN2AQ12879 1464 aa27.31■■□□□ 1.96
SDHA-201ENST00000264932 NEFLP07196 543 aa27.31■■□□□ 1.96
SDHA-201ENST00000264932 CDK11AQ9UQ88 783 aaPredicted RBP27.31■■□□□ 1.96
SDHA-201ENST00000264932 NBPF8Q3BBV2 869 aa27.3■■□□□ 1.96
SDHA-201ENST00000264932 MYT1Q01538 1121 aa27.29■■□□□ 1.96
SDHA-201ENST00000264932 SLC4A1APQ9BWU0 796 aaKnown RBP27.29■■□□□ 1.96
SDHA-201ENST00000264932 RAPGEF6Q8TEU7 1601 aa27.27■■□□□ 1.96
SDHA-201ENST00000264932 PRG4Q92954 1404 aaPredicted RBP27.27■■□□□ 1.96
SDHA-201ENST00000264932 ERCC6Q03468 1493 aa27.27■■□□□ 1.96
SDHA-201ENST00000264932 DNMT1P26358 1616 aaKnown RBP27.27■■□□□ 1.96
SDHA-201ENST00000264932 HNRNPUQ00839 825 aaKnown RBP eCLIP27.27■■□□□ 1.96
SDHA-201ENST00000264932 RPRD2Q5VT52 1461 aaKnown RBP27.25■■□□□ 1.95
SDHA-201ENST00000264932 CHMP7Q8WUX9 453 aaPredicted RBP27.23■■□□□ 1.95
SDHA-201ENST00000264932 CFDP1Q9UEE9 299 aaPredicted RBP27.23■■□□□ 1.95
SDHA-201ENST00000264932 CCDC184Q52MB2 194 aa27.22■■□□□ 1.95
SDHA-201ENST00000264932 PLB1Q6P1J6 1458 aa27.2■■□□□ 1.95
SDHA-201ENST00000264932 FBLN2P98095 1184 aa27.2■■□□□ 1.94
SDHA-201ENST00000264932 TROQ12816 1431 aaPredicted RBP27.19■■□□□ 1.94
SDHA-201ENST00000264932 CCDC7Q96M83 1385 aa27.19■■□□□ 1.94
SDHA-201ENST00000264932 TEX14Q8IWB6 1497 aa27.19■■□□□ 1.94
SDHA-201ENST00000264932 NCOA1Q15788 1441 aa27.19■■□□□ 1.94
SDHA-201ENST00000264932 CNTLNQ9NXG0 1405 aa27.19■■□□□ 1.94
SDHA-201ENST00000264932 ZNF777Q9ULD5 760 aaPredicted RBP27.19■■□□□ 1.94
SDHA-201ENST00000264932 CEP170Q5SW79 1584 aa27.16■■□□□ 1.94
SDHA-201ENST00000264932 CAMSAP2Q08AD1 1489 aa27.15■■□□□ 1.94
SDHA-201ENST00000264932 GPATCH8Q9UKJ3 1502 aaKnown RBP27.15■■□□□ 1.94
SDHA-201ENST00000264932 PRKRIP1Q9H875 184 aaPredicted RBP27.13■■□□□ 1.93
SDHA-201ENST00000264932 PZPP20742 1482 aa27.12■■□□□ 1.93
SDHA-201ENST00000264932 JPH4Q96JJ6 628 aa27.12■■□□□ 1.93
SDHA-201ENST00000264932 SPATA31E1Q6ZUB1 1445 aa27.11■■□□□ 1.93
SDHA-201ENST00000264932 MAGI1Q96QZ7 1491 aaPredicted RBP27.11■■□□□ 1.93
SDHA-201ENST00000264932 KIF7Q2M1P5 1343 aa27.09■■□□□ 1.93
SDHA-201ENST00000264932 SYNJ2O15056 1496 aa27.09■■□□□ 1.93
SDHA-201ENST00000264932 KIF14Q15058 1648 aa27.08■■□□□ 1.92
SDHA-201ENST00000264932 IRX6P78412 446 aaPredicted RBP27.05■■□□□ 1.92
SDHA-201ENST00000264932 FAM9BQ8IZU0 186 aa27.04■■□□□ 1.92
SDHA-201ENST00000264932 PKD2Q13563 968 aa27.04■■□□□ 1.92
SDHA-201ENST00000264932 CARMIL2Q6F5E8 1435 aa27.02■■□□□ 1.92
SDHA-201ENST00000264932 MRS2Q9HD23 443 aa27.01■■□□□ 1.92
SDHA-201ENST00000264932 KIAA1107Q9UPP5 1409 aa27■■□□□ 1.91
SDHA-201ENST00000264932 ADGRL2O95490 1459 aa26.99■■□□□ 1.91
SDHA-201ENST00000264932 ANKRD30AQ9BXX3 1397 aa26.99■■□□□ 1.91
SDHA-201ENST00000264932 PLEKHD1A6NEE1 506 aa26.99■■□□□ 1.91
SDHA-201ENST00000264932 ZNF326Q5BKZ1 582 aaKnown RBP26.99■■□□□ 1.91
SDHA-201ENST00000264932 ITSN2Q9NZM3 1697 aa26.99■■□□□ 1.91
SDHA-201ENST00000264932 NUP160Q12769 1436 aa26.99■■□□□ 1.91
SDHA-201ENST00000264932 RBM19Q9Y4C8 960 aaKnown RBP26.98■■□□□ 1.91
SDHA-201ENST00000264932 ADCY10Q96PN6 1610 aa26.97■■□□□ 1.91
SDHA-201ENST00000264932 ANKRD50Q9ULJ7 1429 aa26.95■■□□□ 1.91
SDHA-201ENST00000264932 ADGBQ8N7X0 1667 aa26.95■■□□□ 1.9
SDHA-201ENST00000264932 MBD5Q9P267 1494 aa26.93■■□□□ 1.9
SDHA-201ENST00000264932 ATP10BO94823 1461 aa26.92■■□□□ 1.9
SDHA-201ENST00000264932 CROCC2H7BZ55 1655 aa26.9■■□□□ 1.9
SDHA-201ENST00000264932 USP47Q96K76 1375 aa26.9■■□□□ 1.9
SDHA-201ENST00000264932 NUP155O75694 1391 aa26.89■■□□□ 1.9
SDHA-201ENST00000264932 CNGB1Q14028 1251 aaPredicted RBP26.89■■□□□ 1.9
SDHA-201ENST00000264932 POLR3GLQ9BT43 218 aa26.89■■□□□ 1.89
SDHA-201ENST00000264932 ABCC10Q5T3U5 1492 aa26.88■■□□□ 1.89
SDHA-201ENST00000264932 ABCA8O94911 1581 aa26.87■■□□□ 1.89
SDHA-201ENST00000264932 HNRNPMP52272 730 aaKnown RBP eCLIP26.86■■□□□ 1.89
SDHA-201ENST00000264932 ZBED9Q6R2W3 1325 aa26.86■■□□□ 1.89
SDHA-201ENST00000264932 C9orf84Q5VXU9 1444 aa26.86■■□□□ 1.89
SDHA-201ENST00000264932 DHX29Q7Z478 1369 aaKnown RBP26.85■■□□□ 1.89
SDHA-201ENST00000264932 TSPY4P0CV99 314 aa26.84■■□□□ 1.89
SDHA-201ENST00000264932 TSPY10P0CW01 314 aa26.84■■□□□ 1.89
SDHA-201ENST00000264932 ANP32EQ9BTT0 268 aa26.84■■□□□ 1.89
SDHA-201ENST00000264932 CDC42BPAQ5VT25 1732 aa26.84■■□□□ 1.89
SDHA-201ENST00000264932 POLR1AO95602 1720 aaPredicted RBP26.84■■□□□ 1.89
SDHA-201ENST00000264932 BCORL1Q5H9F3 1711 aa26.82■■□□□ 1.88
SDHA-201ENST00000264932 SHANK2Q9UPX8 1470 aa26.78■■□□□ 1.88
SDHA-201ENST00000264932 KDM2AQ9Y2K7 1162 aa26.78■■□□□ 1.88
SDHA-201ENST00000264932 ERICH6BQ5W0A0 696 aa26.76■■□□□ 1.87
SDHA-201ENST00000264932 CARD11Q9BXL7 1154 aa26.76■■□□□ 1.87
SDHA-201ENST00000264932 UHRF1BP1Q6BDS2 1440 aa26.76■■□□□ 1.87
SDHA-201ENST00000264932 KIF15Q9NS87 1388 aa26.76■■□□□ 1.87
SDHA-201ENST00000264932 KDM5CP41229 1560 aa26.75■■□□□ 1.87
SDHA-201ENST00000264932 PPP4R2Q9NY27 417 aa26.74■■□□□ 1.87
SDHA-201ENST00000264932 ARID4BQ4LE39 1312 aaPredicted RBP26.72■■□□□ 1.87
SDHA-201ENST00000264932 PTPRGP23470 1445 aa26.72■■□□□ 1.87
SDHA-201ENST00000264932 DCAF11Q8TEB1 546 aa26.71■■□□□ 1.87
SDHA-201ENST00000264932 RALGAPBQ86X10 1494 aa26.71■■□□□ 1.87
SDHA-201ENST00000264932 ST20-MTHFSA0A0A6YYL1 179 aa26.69■■□□□ 1.86
SDHA-201ENST00000264932 KDM5DQ9BY66 1539 aa26.68■■□□□ 1.86
SDHA-201ENST00000264932 SENP3-EIF4A1A0A087X0R7 540 aa26.65■■□□□ 1.86
SDHA-201ENST00000264932 B4GALNT3Q6L9W6 998 aa26.65■■□□□ 1.86
SDHA-201ENST00000264932 ARHGEF12Q9NZN5 1544 aa26.64■■□□□ 1.86
SDHA-201ENST00000264932 ARHGEF5Q12774 1597 aa26.63■■□□□ 1.85
SDHA-201ENST00000264932 PNISRQ8TF01 805 aaKnown RBP26.62■■□□□ 1.85
SDHA-201ENST00000264932 ROCK2O75116 1388 aaKnown RBP26.61■■□□□ 1.85
SDHA-201ENST00000264932 SAMD9LQ8IVG5 1584 aa26.6■■□□□ 1.85
SDHA-201ENST00000264932 MSH5O43196 834 aa26.6■■□□□ 1.85
SDHA-201ENST00000264932 CCDC141Q6ZP82 1450 aa26.6■■□□□ 1.85
SDHA-201ENST00000264932 TMC1Q8TDI8 760 aa26.58■■□□□ 1.85
SDHA-201ENST00000264932 SMG6Q86US8 1419 aaKnown RBP26.58■■□□□ 1.85
SDHA-201ENST00000264932 RSPH4AQ5TD94 716 aa26.57■■□□□ 1.84
SDHA-201ENST00000264932 CHD1O14646 1710 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms