RNA–Protein interactions for RNA: ENST00000264638.8

CNTNAP1-201, Transcript of contactin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP1, Length 5,276 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1-201ENST00000264638 LAS1LQ9Y4W2 734 aaKnown RBP17.16■□□□□ 0.34
CNTNAP1-201ENST00000264638 CC2D1BQ5T0F9 858 aaKnown RBP17.16■□□□□ 0.34
CNTNAP1-201ENST00000264638 U2SURPO15042 1029 aaKnown RBP17.15■□□□□ 0.34
CNTNAP1-201ENST00000264638 CASC1Q6TDU7 716 aa17.15■□□□□ 0.34
CNTNAP1-201ENST00000264638 NUP155O75694 1391 aa17.15■□□□□ 0.34
CNTNAP1-201ENST00000264638 DEKP35659 375 aaKnown RBP17.14■□□□□ 0.34
CNTNAP1-201ENST00000264638 SMARCA4P51532 1647 aa17.14■□□□□ 0.33
CNTNAP1-201ENST00000264638 GOLGA6L6A8MZA4 724 aa17.12■□□□□ 0.33
CNTNAP1-201ENST00000264638 MPHOSPH9Q99550 1183 aa17.12■□□□□ 0.33
CNTNAP1-201ENST00000264638 CCDC18Q5T9S5 1454 aa17.12■□□□□ 0.33
CNTNAP1-201ENST00000264638 FANCD2Q9BXW9 1451 aa17.11■□□□□ 0.33
CNTNAP1-201ENST00000264638 MORC1Q86VD1 984 aa17.11■□□□□ 0.33
CNTNAP1-201ENST00000264638 CHAF1AQ13111 956 aaPredicted RBP17.1■□□□□ 0.33
CNTNAP1-201ENST00000264638 HDGFL2Q7Z4V5 671 aaPredicted RBP17.1■□□□□ 0.33
CNTNAP1-201ENST00000264638 NRDCO43847 1150 aa17.1■□□□□ 0.33
CNTNAP1-201ENST00000264638 SPAG9O60271 1321 aaKnown RBP17.09■□□□□ 0.33
CNTNAP1-201ENST00000264638 KIF3BO15066 747 aa17.09■□□□□ 0.33
CNTNAP1-201ENST00000264638 FHOD3Q2V2M9 1422 aa17.08■□□□□ 0.32
CNTNAP1-201ENST00000264638 MSNP26038 577 aaKnown RBP17.06■□□□□ 0.32
CNTNAP1-201ENST00000264638 HSPA5P11021 654 aaKnown RBP17.06■□□□□ 0.32
CNTNAP1-201ENST00000264638 SAFB2Q14151 953 aaKnown RBP eCLIP17.06■□□□□ 0.32
CNTNAP1-201ENST00000264638 STK26Q9P289 416 aa17.06■□□□□ 0.32
CNTNAP1-201ENST00000264638 RAB3GAP2Q9H2M9 1393 aa17.06■□□□□ 0.32
CNTNAP1-201ENST00000264638 HNRNPMP52272 730 aaKnown RBP eCLIP17.05■□□□□ 0.32
CNTNAP1-201ENST00000264638 CCER2I3L3R5 266 aa17.04■□□□□ 0.32
CNTNAP1-201ENST00000264638 FRAT1Q92837 279 aaPredicted RBP17.04■□□□□ 0.32
CNTNAP1-201ENST00000264638 TSHZ2Q9NRE2 1034 aa17.04■□□□□ 0.32
CNTNAP1-201ENST00000264638 SENP3-EIF4A1A0A087X0R7 540 aa17.03■□□□□ 0.32
CNTNAP1-201ENST00000264638 FOXD1Q16676 465 aa17.02■□□□□ 0.32
CNTNAP1-201ENST00000264638 ROCK2O75116 1388 aaKnown RBP17.02■□□□□ 0.32
CNTNAP1-201ENST00000264638 EIF3AQ14152 1382 aaKnown RBP17.02■□□□□ 0.32
CNTNAP1-201ENST00000264638 KTN1Q86UP2 1357 aaKnown RBP17.01■□□□□ 0.31
CNTNAP1-201ENST00000264638 WASHC2CQ9Y4E1 1318 aa17.01■□□□□ 0.31
CNTNAP1-201ENST00000264638 HSP90AB1P08238 724 aaKnown RBP17.01■□□□□ 0.31
CNTNAP1-201ENST00000264638 PTPRGP23470 1445 aa17■□□□□ 0.31
CNTNAP1-201ENST00000264638 NPHP1O15259 732 aa17■□□□□ 0.31
CNTNAP1-201ENST00000264638 EID1Q9Y6B2 187 aa17■□□□□ 0.31
CNTNAP1-201ENST00000264638 PLCB2Q00722 1185 aa16.99■□□□□ 0.31
CNTNAP1-201ENST00000264638 SOX12O15370 315 aa16.99■□□□□ 0.31
CNTNAP1-201ENST00000264638 RBM19Q9Y4C8 960 aaKnown RBP16.99■□□□□ 0.31
CNTNAP1-201ENST00000264638 RTF1Q92541 710 aaKnown RBP16.98■□□□□ 0.31
CNTNAP1-201ENST00000264638 OS9Q13438 667 aaPredicted RBP16.97■□□□□ 0.31
CNTNAP1-201ENST00000264638 OSCARQ8IYS5 282 aa16.97■□□□□ 0.31
CNTNAP1-201ENST00000264638 RALBP1Q15311 655 aa16.96■□□□□ 0.31
CNTNAP1-201ENST00000264638 RGS3P49796 1198 aa16.96■□□□□ 0.31
CNTNAP1-201ENST00000264638 CALD1Q05682 793 aaKnown RBP16.95■□□□□ 0.3
CNTNAP1-201ENST00000264638 HSCBQ8IWL3 235 aa16.95■□□□□ 0.3
CNTNAP1-201ENST00000264638 PTMSP20962 102 aa16.95■□□□□ 0.3
CNTNAP1-201ENST00000264638 TERF2IPQ9NYB0 399 aa16.94■□□□□ 0.3
CNTNAP1-201ENST00000264638 CHMP4AQ9BY43 222 aa16.93■□□□□ 0.3
CNTNAP1-201ENST00000264638 PAK3O75914 559 aaPredicted RBP16.92■□□□□ 0.3
CNTNAP1-201ENST00000264638 GAPVD1Q14C86 1478 aa16.9■□□□□ 0.3
CNTNAP1-201ENST00000264638 NCAPD3P42695 1498 aa16.9■□□□□ 0.3
CNTNAP1-201ENST00000264638 L3MBTL2Q969R5 705 aa16.9■□□□□ 0.3
CNTNAP1-201ENST00000264638 IPO8O15397 1037 aaKnown RBP16.9■□□□□ 0.3
CNTNAP1-201ENST00000264638 B4GALNT3Q6L9W6 998 aa16.9■□□□□ 0.3
CNTNAP1-201ENST00000264638 U2AF1L5P0DN76 240 aaPredicted RBP16.89■□□□□ 0.29
CNTNAP1-201ENST00000264638 U2AF1Q01081 240 aaKnown RBP eCLIP16.89■□□□□ 0.29
CNTNAP1-201ENST00000264638 CFAP44Q96MT7 982 aa16.89■□□□□ 0.29
CNTNAP1-201ENST00000264638 TPRNQ4KMQ1 711 aa16.88■□□□□ 0.29
CNTNAP1-201ENST00000264638 CSB-PGBD3P0DP91 1061 aa16.87■□□□□ 0.29
CNTNAP1-201ENST00000264638 FGD5Q6ZNL6 1462 aa16.87■□□□□ 0.29
CNTNAP1-201ENST00000264638 GOLGA2Q08379 1002 aa16.87■□□□□ 0.29
CNTNAP1-201ENST00000264638 GOLGA6L4A6NEF3 574 aa16.87■□□□□ 0.29
CNTNAP1-201ENST00000264638 CYB5RLQ6IPT4 315 aa16.86■□□□□ 0.29
CNTNAP1-201ENST00000264638 UACAQ9BZF9 1416 aa16.86■□□□□ 0.29
CNTNAP1-201ENST00000264638 IGF1RP08069 1367 aa16.85■□□□□ 0.29
CNTNAP1-201ENST00000264638 KIAA2012Q0VF49 1180 aa16.85■□□□□ 0.29
CNTNAP1-201ENST00000264638 CCDC144AA2RUR9 1427 aa16.84■□□□□ 0.29
CNTNAP1-201ENST00000264638 KCNJ4P48050 445 aa16.84■□□□□ 0.29
CNTNAP1-201ENST00000264638 NGDNQ8NEJ9 315 aaKnown RBP16.83■□□□□ 0.28
CNTNAP1-201ENST00000264638 TNNT3P45378 269 aaPredicted RBP16.83■□□□□ 0.28
CNTNAP1-201ENST00000264638 FGD1P98174 961 aa16.83■□□□□ 0.28
CNTNAP1-201ENST00000264638 GBP4Q96PP9 640 aa16.83■□□□□ 0.28
CNTNAP1-201ENST00000264638 AMER1Q5JTC6 1135 aaPredicted RBP16.82■□□□□ 0.28
CNTNAP1-201ENST00000264638 VGFO15240 615 aaPredicted RBP16.82■□□□□ 0.28
CNTNAP1-201ENST00000264638 RUSC2Q8N2Y8 1516 aa16.81■□□□□ 0.28
CNTNAP1-201ENST00000264638 DRC7Q8IY82 874 aa16.81■□□□□ 0.28
CNTNAP1-201ENST00000264638 MCCP23508 829 aa16.79■□□□□ 0.28
CNTNAP1-201ENST00000264638 NLRP13Q86W25 1043 aa16.78■□□□□ 0.28
CNTNAP1-201ENST00000264638 PRKCSHP14314 528 aaPredicted RBP16.77■□□□□ 0.28
CNTNAP1-201ENST00000264638 HDAC5Q9UQL6 1122 aa16.77■□□□□ 0.28
CNTNAP1-201ENST00000264638 RAD54L2Q9Y4B4 1467 aa16.77■□□□□ 0.28
CNTNAP1-201ENST00000264638 NUTM2DQ5VT03 806 aaPredicted RBP16.77■□□□□ 0.27
CNTNAP1-201ENST00000264638 TCERG1O14776 1098 aaKnown RBP16.76■□□□□ 0.27
CNTNAP1-201ENST00000264638 LMOD3Q0VAK6 560 aa16.76■□□□□ 0.27
CNTNAP1-201ENST00000264638 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.76■□□□□ 0.27
CNTNAP1-201ENST00000264638 TRAK1Q9UPV9 953 aa16.76■□□□□ 0.27
CNTNAP1-201ENST00000264638 STK31Q9BXU1 1019 aa16.76■□□□□ 0.27
CNTNAP1-201ENST00000264638 RSPH6AQ9H0K4 717 aa16.76■□□□□ 0.27
CNTNAP1-201ENST00000264638 MYOM3Q5VTT5 1437 aa16.75■□□□□ 0.27
CNTNAP1-201ENST00000264638 PHLDB1Q86UU1 1377 aa16.75■□□□□ 0.27
CNTNAP1-201ENST00000264638 GOLGA6L3A6NEY3 463 aa16.74■□□□□ 0.27
CNTNAP1-201ENST00000264638 AMPHP49418 695 aa16.74■□□□□ 0.27
CNTNAP1-201ENST00000264638 RCAN3Q9UKA8 241 aa16.74■□□□□ 0.27
CNTNAP1-201ENST00000264638 SYAP1Q96A49 352 aaPredicted RBP16.73■□□□□ 0.27
CNTNAP1-201ENST00000264638 RWDD1Q9H446 243 aaPredicted RBP16.72■□□□□ 0.27
CNTNAP1-201ENST00000264638 PDE3BQ13370 1112 aa16.71■□□□□ 0.27
CNTNAP1-201ENST00000264638 IPO9Q96P70 1041 aaKnown RBP16.71■□□□□ 0.27
CNTNAP1-201ENST00000264638 HSP90AA2PQ14568 343 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms