RNA–Protein interactions for RNA: ENST00000264596.3

NEIL3-201, Transcript of nei like DNA glycosylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL3, Length 2,408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-201ENST00000264596 L3MBTL2Q969R5 705 aa27.61■■■□□ 2.01
NEIL3-201ENST00000264596 ABCC5O15440 1437 aa27.6■■■□□ 2.01
NEIL3-201ENST00000264596 EIF4G3O43432 1585 aaKnown RBP27.59■■■□□ 2.01
NEIL3-201ENST00000264596 DNMT1P26358 1616 aaKnown RBP27.59■■■□□ 2.01
NEIL3-201ENST00000264596 EIF4G2P78344 907 aaKnown RBP eCLIP27.58■■■□□ 2.01
NEIL3-201ENST00000264596 ROCK1Q13464 1354 aa27.58■■■□□ 2.01
NEIL3-201ENST00000264596 NEFLP07196 543 aa27.57■■■□□ 2
NEIL3-201ENST00000264596 CDK11AQ9UQ88 783 aaPredicted RBP27.56■■■□□ 2
NEIL3-201ENST00000264596 ANKRD30BQ9BXX2 1392 aa27.51■■□□□ 1.99
NEIL3-201ENST00000264596 PRG4Q92954 1404 aaPredicted RBP27.51■■□□□ 1.99
NEIL3-201ENST00000264596 SLC4A1APQ9BWU0 796 aaKnown RBP27.5■■□□□ 1.99
NEIL3-201ENST00000264596 RPRD2Q5VT52 1461 aaKnown RBP27.48■■□□□ 1.99
NEIL3-201ENST00000264596 CHMP7Q8WUX9 453 aaPredicted RBP27.47■■□□□ 1.99
NEIL3-201ENST00000264596 HNRNPUQ00839 825 aaKnown RBP eCLIP27.47■■□□□ 1.99
NEIL3-201ENST00000264596 PLB1Q6P1J6 1458 aa27.46■■□□□ 1.99
NEIL3-201ENST00000264596 TROQ12816 1431 aaPredicted RBP27.45■■□□□ 1.99
NEIL3-201ENST00000264596 FBLN2P98095 1184 aa27.45■■□□□ 1.98
NEIL3-201ENST00000264596 NBPF8Q3BBV2 869 aa27.45■■□□□ 1.98
NEIL3-201ENST00000264596 CFDP1Q9UEE9 299 aaPredicted RBP27.45■■□□□ 1.98
NEIL3-201ENST00000264596 ERCC6Q03468 1493 aa27.44■■□□□ 1.98
NEIL3-201ENST00000264596 C11orf95C9JLR9 678 aaPredicted RBP27.44■■□□□ 1.98
NEIL3-201ENST00000264596 CAMSAP2Q08AD1 1489 aa27.44■■□□□ 1.98
NEIL3-201ENST00000264596 CEP170Q5SW79 1584 aa27.44■■□□□ 1.98
NEIL3-201ENST00000264596 CNTLNQ9NXG0 1405 aa27.44■■□□□ 1.98
NEIL3-201ENST00000264596 TEX14Q8IWB6 1497 aa27.43■■□□□ 1.98
NEIL3-201ENST00000264596 ZNF777Q9ULD5 760 aaPredicted RBP27.42■■□□□ 1.98
NEIL3-201ENST00000264596 MAGI1Q96QZ7 1491 aaPredicted RBP27.41■■□□□ 1.98
NEIL3-201ENST00000264596 CCDC7Q96M83 1385 aa27.39■■□□□ 1.98
NEIL3-201ENST00000264596 NCOA1Q15788 1441 aa27.39■■□□□ 1.98
NEIL3-201ENST00000264596 KIF14Q15058 1648 aa27.39■■□□□ 1.97
NEIL3-201ENST00000264596 ITSN2Q9NZM3 1697 aa27.38■■□□□ 1.97
NEIL3-201ENST00000264596 SYNJ2O15056 1496 aa27.38■■□□□ 1.97
NEIL3-201ENST00000264596 GPATCH8Q9UKJ3 1502 aaKnown RBP27.37■■□□□ 1.97
NEIL3-201ENST00000264596 PZPP20742 1482 aa27.36■■□□□ 1.97
NEIL3-201ENST00000264596 CCDC184Q52MB2 194 aa27.34■■□□□ 1.97
NEIL3-201ENST00000264596 ADGBQ8N7X0 1667 aa27.34■■□□□ 1.97
NEIL3-201ENST00000264596 CARMIL2Q6F5E8 1435 aa27.32■■□□□ 1.96
NEIL3-201ENST00000264596 JPH4Q96JJ6 628 aa27.31■■□□□ 1.96
NEIL3-201ENST00000264596 ADCY10Q96PN6 1610 aa27.31■■□□□ 1.96
NEIL3-201ENST00000264596 PRKRIP1Q9H875 184 aaPredicted RBP27.29■■□□□ 1.96
NEIL3-201ENST00000264596 CROCC2H7BZ55 1655 aa27.28■■□□□ 1.96
NEIL3-201ENST00000264596 KIF7Q2M1P5 1343 aa27.27■■□□□ 1.96
NEIL3-201ENST00000264596 SPATA31E1Q6ZUB1 1445 aa27.27■■□□□ 1.96
NEIL3-201ENST00000264596 ADGRL2O95490 1459 aa27.26■■□□□ 1.95
NEIL3-201ENST00000264596 ANKRD30AQ9BXX3 1397 aa27.24■■□□□ 1.95
NEIL3-201ENST00000264596 NUP160Q12769 1436 aa27.24■■□□□ 1.95
NEIL3-201ENST00000264596 KIAA1107Q9UPP5 1409 aa27.24■■□□□ 1.95
NEIL3-201ENST00000264596 IRX6P78412 446 aaPredicted RBP27.23■■□□□ 1.95
NEIL3-201ENST00000264596 PKD2Q13563 968 aa27.23■■□□□ 1.95
NEIL3-201ENST00000264596 ZNF326Q5BKZ1 582 aaKnown RBP27.23■■□□□ 1.95
NEIL3-201ENST00000264596 FAM9BQ8IZU0 186 aa27.23■■□□□ 1.95
NEIL3-201ENST00000264596 MRS2Q9HD23 443 aa27.22■■□□□ 1.95
NEIL3-201ENST00000264596 PLEKHD1A6NEE1 506 aa27.21■■□□□ 1.95
NEIL3-201ENST00000264596 POLR1AO95602 1720 aaPredicted RBP27.2■■□□□ 1.95
NEIL3-201ENST00000264596 ANKRD50Q9ULJ7 1429 aa27.19■■□□□ 1.94
NEIL3-201ENST00000264596 MBD5Q9P267 1494 aa27.18■■□□□ 1.94
NEIL3-201ENST00000264596 CDC42BPAQ5VT25 1732 aa27.18■■□□□ 1.94
NEIL3-201ENST00000264596 ABCA8O94911 1581 aa27.15■■□□□ 1.94
NEIL3-201ENST00000264596 ATP10BO94823 1461 aa27.14■■□□□ 1.94
NEIL3-201ENST00000264596 POLR3GLQ9BT43 218 aa27.14■■□□□ 1.94
NEIL3-201ENST00000264596 ABCC10Q5T3U5 1492 aa27.13■■□□□ 1.93
NEIL3-201ENST00000264596 USP47Q96K76 1375 aa27.12■■□□□ 1.93
NEIL3-201ENST00000264596 C9orf84Q5VXU9 1444 aa27.12■■□□□ 1.93
NEIL3-201ENST00000264596 CNGB1Q14028 1251 aaPredicted RBP27.11■■□□□ 1.93
NEIL3-201ENST00000264596 NUP155O75694 1391 aa27.11■■□□□ 1.93
NEIL3-201ENST00000264596 RBM19Q9Y4C8 960 aaKnown RBP27.1■■□□□ 1.93
NEIL3-201ENST00000264596 ANP32EQ9BTT0 268 aa27.09■■□□□ 1.93
NEIL3-201ENST00000264596 BCORL1Q5H9F3 1711 aa27.08■■□□□ 1.93
NEIL3-201ENST00000264596 SHANK2Q9UPX8 1470 aa27.07■■□□□ 1.92
NEIL3-201ENST00000264596 TSPY4P0CV99 314 aa27.07■■□□□ 1.92
NEIL3-201ENST00000264596 TSPY10P0CW01 314 aa27.07■■□□□ 1.92
NEIL3-201ENST00000264596 ZBED9Q6R2W3 1325 aa27.05■■□□□ 1.92
NEIL3-201ENST00000264596 HNRNPMP52272 730 aaKnown RBP eCLIP27.05■■□□□ 1.92
NEIL3-201ENST00000264596 KDM5CP41229 1560 aa27.03■■□□□ 1.92
NEIL3-201ENST00000264596 DHX29Q7Z478 1369 aaKnown RBP27.02■■□□□ 1.92
NEIL3-201ENST00000264596 KIF15Q9NS87 1388 aa27■■□□□ 1.91
NEIL3-201ENST00000264596 KDM2AQ9Y2K7 1162 aa26.98■■□□□ 1.91
NEIL3-201ENST00000264596 UHRF1BP1Q6BDS2 1440 aa26.97■■□□□ 1.91
NEIL3-201ENST00000264596 CARD11Q9BXL7 1154 aa26.97■■□□□ 1.91
NEIL3-201ENST00000264596 PTPRGP23470 1445 aa26.97■■□□□ 1.91
NEIL3-201ENST00000264596 RALGAPBQ86X10 1494 aa26.96■■□□□ 1.91
NEIL3-201ENST00000264596 KDM5DQ9BY66 1539 aa26.96■■□□□ 1.91
NEIL3-201ENST00000264596 ARHGEF5Q12774 1597 aa26.93■■□□□ 1.9
NEIL3-201ENST00000264596 ERICH6BQ5W0A0 696 aa26.92■■□□□ 1.9
NEIL3-201ENST00000264596 ARHGEF12Q9NZN5 1544 aa26.92■■□□□ 1.9
NEIL3-201ENST00000264596 PPP4R2Q9NY27 417 aa26.92■■□□□ 1.9
NEIL3-201ENST00000264596 ARID4BQ4LE39 1312 aaPredicted RBP26.91■■□□□ 1.9
NEIL3-201ENST00000264596 DCAF11Q8TEB1 546 aa26.91■■□□□ 1.9
NEIL3-201ENST00000264596 SAMD9LQ8IVG5 1584 aa26.9■■□□□ 1.9
NEIL3-201ENST00000264596 CCDC141Q6ZP82 1450 aa26.89■■□□□ 1.89
NEIL3-201ENST00000264596 CDC42BPBQ9Y5S2 1711 aa26.88■■□□□ 1.89
NEIL3-201ENST00000264596 ST20-MTHFSA0A0A6YYL1 179 aa26.86■■□□□ 1.89
NEIL3-201ENST00000264596 PREX2Q70Z35 1606 aa26.86■■□□□ 1.89
NEIL3-201ENST00000264596 ROCK2O75116 1388 aaKnown RBP26.85■■□□□ 1.89
NEIL3-201ENST00000264596 FAM135AQ9P2D6 1515 aa26.84■■□□□ 1.89
NEIL3-201ENST00000264596 SENP3-EIF4A1A0A087X0R7 540 aa26.82■■□□□ 1.88
NEIL3-201ENST00000264596 B4GALNT3Q6L9W6 998 aa26.82■■□□□ 1.88
NEIL3-201ENST00000264596 SYCP2Q9BX26 1530 aa26.8■■□□□ 1.88
NEIL3-201ENST00000264596 TMC1Q8TDI8 760 aa26.78■■□□□ 1.88
NEIL3-201ENST00000264596 SMG6Q86US8 1419 aaKnown RBP26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms