RNA–Protein interactions for RNA: ENST00000263598.6

LCN1-201, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-201ENST00000263598 HECW1Q76N89 1606 aa14.86□□□□□ -0.03
LCN1-201ENST00000263598 UBTFP17480 764 aaKnown RBP14.86□□□□□ -0.03
LCN1-201ENST00000263598 HSPA2P54652 639 aa14.86□□□□□ -0.03
LCN1-201ENST00000263598 MLECQ14165 292 aa14.86□□□□□ -0.03
LCN1-201ENST00000263598 EFCAB2Q5VUJ9 269 aa14.86□□□□□ -0.03
LCN1-201ENST00000263598 EHMT2Q96KQ7 1210 aa14.83□□□□□ -0.04
LCN1-201ENST00000263598 ATP10AO60312 1499 aa14.82□□□□□ -0.04
LCN1-201ENST00000263598 SIGLEC1Q9BZZ2 1709 aa14.82□□□□□ -0.04
LCN1-201ENST00000263598 C9orf84Q5VXU9 1444 aa14.82□□□□□ -0.04
LCN1-201ENST00000263598 MYO5CQ9NQX4 1742 aa14.8□□□□□ -0.04
LCN1-201ENST00000263598 FER1L4A9Z1Z3 1794 aa14.8□□□□□ -0.04
LCN1-201ENST00000263598 CLIP1P30622 1438 aa14.79□□□□□ -0.04
LCN1-201ENST00000263598 ZNF518AQ6AHZ1 1483 aa14.79□□□□□ -0.04
LCN1-201ENST00000263598 ARHGAP35Q9NRY4 1499 aa14.79□□□□□ -0.04
LCN1-201ENST00000263598 KIF14Q15058 1648 aa14.78□□□□□ -0.04
LCN1-201ENST00000263598 ARHGEF12Q9NZN5 1544 aa14.78□□□□□ -0.04
LCN1-201ENST00000263598 MYT1LQ9UL68 1186 aa14.78□□□□□ -0.04
LCN1-201ENST00000263598 ARHGAP5Q13017 1502 aa14.77□□□□□ -0.04
LCN1-201ENST00000263598 TROQ12816 1431 aaPredicted RBP14.77□□□□□ -0.04
LCN1-201ENST00000263598 CERKQ8TCT0 537 aa14.76□□□□□ -0.05
LCN1-201ENST00000263598 AFAP1Q8N556 730 aa14.75□□□□□ -0.05
LCN1-201ENST00000263598 CEBPAP49715 358 aaPredicted RBP14.74□□□□□ -0.05
LCN1-201ENST00000263598 KDM5CP41229 1560 aa14.73□□□□□ -0.05
LCN1-201ENST00000263598 DMRT2Q9Y5R5 561 aa14.73□□□□□ -0.05
LCN1-201ENST00000263598 PREX1Q8TCU6 1659 aa14.72□□□□□ -0.05
LCN1-201ENST00000263598 UHRF1BP1Q6BDS2 1440 aa14.71□□□□□ -0.05
LCN1-201ENST00000263598 ESF1Q9H501 851 aaKnown RBP14.7□□□□□ -0.06
LCN1-201ENST00000263598 MLH3Q9UHC1 1453 aa14.69□□□□□ -0.06
LCN1-201ENST00000263598 REREQ9P2R6 1566 aa14.69□□□□□ -0.06
LCN1-201ENST00000263598 CCDC18Q5T9S5 1454 aa14.69□□□□□ -0.06
LCN1-201ENST00000263598 DIP2CQ9Y2E4 1556 aa14.68□□□□□ -0.06
LCN1-201ENST00000263598 CHIC1Q5VXU3 224 aa14.68□□□□□ -0.06
LCN1-201ENST00000263598 CASKIN1Q8WXD9 1431 aa14.66□□□□□ -0.06
LCN1-201ENST00000263598 LRRIQ1Q96JM4 1722 aa14.66□□□□□ -0.06
LCN1-201ENST00000263598 CDC42BPBQ9Y5S2 1711 aa14.66□□□□□ -0.06
LCN1-201ENST00000263598 PREX2Q70Z35 1606 aa14.66□□□□□ -0.06
LCN1-201ENST00000263598 ABCA6Q8N139 1617 aa14.65□□□□□ -0.06
LCN1-201ENST00000263598 ABCC1P33527 1531 aa14.65□□□□□ -0.06
LCN1-201ENST00000263598 AGLP35573 1532 aa14.65□□□□□ -0.06
LCN1-201ENST00000263598 TRAPPC8Q9Y2L5 1435 aa14.65□□□□□ -0.06
LCN1-201ENST00000263598 CNTLNQ9NXG0 1405 aa14.62□□□□□ -0.07
LCN1-201ENST00000263598 STRCQ7RTU9 1775 aa14.62□□□□□ -0.07
LCN1-201ENST00000263598 SETD1BQ9UPS6 1966 aaKnown RBP14.62□□□□□ -0.07
LCN1-201ENST00000263598 C3P01024 1663 aa14.61□□□□□ -0.07
LCN1-201ENST00000263598 ITSN2Q9NZM3 1697 aa14.61□□□□□ -0.07
LCN1-201ENST00000263598 PTPRTO14522 1441 aa14.6□□□□□ -0.07
LCN1-201ENST00000263598 ZNF777Q9ULD5 760 aaPredicted RBP14.6□□□□□ -0.07
LCN1-201ENST00000263598 FYCO1Q9BQS8 1478 aa14.59□□□□□ -0.07
LCN1-201ENST00000263598 KIDINS220Q9ULH0 1771 aa14.58□□□□□ -0.08
LCN1-201ENST00000263598 SPAG9O60271 1321 aaKnown RBP14.57□□□□□ -0.08
LCN1-201ENST00000263598 CDC42BPAQ5VT25 1732 aa14.57□□□□□ -0.08
LCN1-201ENST00000263598 SAMD9LQ8IVG5 1584 aa14.56□□□□□ -0.08
LCN1-201ENST00000263598 HNRNPMP52272 730 aaKnown RBP eCLIP14.55□□□□□ -0.08
LCN1-201ENST00000263598 NPATQ14207 1427 aa14.55□□□□□ -0.08
LCN1-201ENST00000263598 GPATCH8Q9UKJ3 1502 aaKnown RBP14.55□□□□□ -0.08
LCN1-201ENST00000263598 CFDP1Q9UEE9 299 aaPredicted RBP14.54□□□□□ -0.08
LCN1-201ENST00000263598 ZMYM3Q14202 1370 aa14.54□□□□□ -0.08
LCN1-201ENST00000263598 DISP3Q9P2K9 1392 aa14.54□□□□□ -0.08
LCN1-201ENST00000263598 NCOA1Q15788 1441 aa14.54□□□□□ -0.08
LCN1-201ENST00000263598 SYCP2Q9BX26 1530 aa14.54□□□□□ -0.08
LCN1-201ENST00000263598 PLEKHH2Q8IVE3 1493 aa14.53□□□□□ -0.08
LCN1-201ENST00000263598 KIAA1107Q9UPP5 1409 aa14.53□□□□□ -0.08
LCN1-201ENST00000263598 MROH2AA6NES4 1674 aa14.52□□□□□ -0.08
LCN1-201ENST00000263598 CCNB3Q8WWL7 1395 aa14.52□□□□□ -0.08
LCN1-201ENST00000263598 ATP7AQ04656 1500 aa14.51□□□□□ -0.09
LCN1-201ENST00000263598 IQSEC2Q5JU85 1478 aa14.5□□□□□ -0.09
LCN1-201ENST00000263598 CAMSAP1Q5T5Y3 1602 aa14.5□□□□□ -0.09
LCN1-201ENST00000263598 LTBP4Q8N2S1 1624 aa14.5□□□□□ -0.09
LCN1-201ENST00000263598 A2MP01023 1474 aa14.5□□□□□ -0.09
LCN1-201ENST00000263598 SUPT6HQ7KZ85 1726 aaKnown RBP14.49□□□□□ -0.09
LCN1-201ENST00000263598 MTUS2Q5JR59 1369 aa14.49□□□□□ -0.09
LCN1-201ENST00000263598 GGT6Q6P531 493 aa14.48□□□□□ -0.09
LCN1-201ENST00000263598 INO80Q9ULG1 1556 aaPredicted RBP14.47□□□□□ -0.09
LCN1-201ENST00000263598 PPP6R1Q9UPN7 881 aa14.47□□□□□ -0.09
LCN1-201ENST00000263598 PLXNC1O60486 1568 aa14.47□□□□□ -0.09
LCN1-201ENST00000263598 NCKAP5LQ9HCH0 1330 aa14.46□□□□□ -0.09
LCN1-201ENST00000263598 PKD2Q13563 968 aa14.46□□□□□ -0.09
LCN1-201ENST00000263598 CLTCQ00610 1675 aaKnown RBP14.46□□□□□ -0.1
LCN1-201ENST00000263598 ILDR2Q71H61 639 aa14.45□□□□□ -0.1
LCN1-201ENST00000263598 PLA2R1Q13018 1463 aa14.44□□□□□ -0.1
LCN1-201ENST00000263598 PTPRKQ15262 1439 aa14.44□□□□□ -0.1
LCN1-201ENST00000263598 SOCS7O14512 581 aa14.43□□□□□ -0.1
LCN1-201ENST00000263598 MYO3AQ8NEV4 1616 aa14.43□□□□□ -0.1
LCN1-201ENST00000263598 CEP170BQ9Y4F5 1589 aaPredicted RBP14.43□□□□□ -0.1
LCN1-201ENST00000263598 ZNF142P52746 1687 aaPredicted RBP14.42□□□□□ -0.1
LCN1-201ENST00000263598 ZNF335Q9H4Z2 1342 aaPredicted RBP14.42□□□□□ -0.1
LCN1-201ENST00000263598 SPATA31D1Q6ZQQ2 1576 aa14.42□□□□□ -0.1
LCN1-201ENST00000263598 ADGBQ8N7X0 1667 aa14.42□□□□□ -0.1
LCN1-201ENST00000263598 ZNF644Q9H582 1327 aaPredicted RBP14.41□□□□□ -0.1
LCN1-201ENST00000263598 RTEL1-TNFRSF6BF6WH68 1400 aa14.41□□□□□ -0.1
LCN1-201ENST00000263598 TCOF1Q13428 1488 aaKnown RBP14.4□□□□□ -0.1
LCN1-201ENST00000263598 UBAP1LF5GYI3 381 aa14.4□□□□□ -0.1
LCN1-201ENST00000263598 EHBP1L1Q8N3D4 1523 aa14.4□□□□□ -0.1
LCN1-201ENST00000263598 TIAM1Q13009 1591 aa14.39□□□□□ -0.11
LCN1-201ENST00000263598 MBD5Q9P267 1494 aa14.39□□□□□ -0.11
LCN1-201ENST00000263598 DHX29Q7Z478 1369 aaKnown RBP14.39□□□□□ -0.11
LCN1-201ENST00000263598 CEP162Q5TB80 1403 aa14.39□□□□□ -0.11
LCN1-201ENST00000263598 A2ML1A8K2U0 1454 aa14.38□□□□□ -0.11
LCN1-201ENST00000263598 KIF3BO15066 747 aa14.36□□□□□ -0.11
LCN1-201ENST00000263598 RSPH4AQ5TD94 716 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms