RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 UHRF1BP1LA0JNW5 1464 aa23.22■■□□□ 1.31
VPS26A-201ENST00000263559 ZNF777Q9ULD5 760 aaPredicted RBP23.22■■□□□ 1.31
VPS26A-201ENST00000263559 GCC2Q8IWJ2 1684 aa23.21■■□□□ 1.31
VPS26A-201ENST00000263559 AKNAQ7Z591 1439 aa23.2■■□□□ 1.31
VPS26A-201ENST00000263559 ZCCHC11Q5TAX3 1644 aaKnown RBP23.19■■□□□ 1.3
VPS26A-201ENST00000263559 KDM5BQ9UGL1 1544 aa23.17■■□□□ 1.3
VPS26A-201ENST00000263559 ROCK1Q13464 1354 aa23.15■■□□□ 1.3
VPS26A-201ENST00000263559 KDM6BO15054 1643 aa23.13■■□□□ 1.29
VPS26A-201ENST00000263559 CDC42BPBQ9Y5S2 1711 aa23.12■■□□□ 1.29
VPS26A-201ENST00000263559 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.11■■□□□ 1.29
VPS26A-201ENST00000263559 TTC37Q6PGP7 1564 aa23.11■■□□□ 1.29
VPS26A-201ENST00000263559 PREX2Q70Z35 1606 aa23.11■■□□□ 1.29
VPS26A-201ENST00000263559 CROCC2H7BZ55 1655 aa23.1■■□□□ 1.29
VPS26A-201ENST00000263559 KCNH8Q96L42 1107 aa23.09■■□□□ 1.29
VPS26A-201ENST00000263559 SIN3AQ96ST3 1273 aa23.08■■□□□ 1.29
VPS26A-201ENST00000263559 ADGBQ8N7X0 1667 aa23.07■■□□□ 1.28
VPS26A-201ENST00000263559 SAMD9LQ8IVG5 1584 aa23.04■■□□□ 1.28
VPS26A-201ENST00000263559 NCOA1Q15788 1441 aa23.04■■□□□ 1.28
VPS26A-201ENST00000263559 MYO5CQ9NQX4 1742 aa23.03■■□□□ 1.28
VPS26A-201ENST00000263559 NEUROD1Q13562 356 aa23.03■■□□□ 1.28
VPS26A-201ENST00000263559 TRIM52Q96A61 297 aa23.03■■□□□ 1.28
VPS26A-201ENST00000263559 ADGRL2O95490 1459 aa23.03■■□□□ 1.28
VPS26A-201ENST00000263559 ZNF316A6NFI3 1004 aaPredicted RBP23.03■■□□□ 1.28
VPS26A-201ENST00000263559 HNRNPMP52272 730 aaKnown RBP eCLIP23.03■■□□□ 1.282e-7■■■■■ 29.2
VPS26A-201ENST00000263559 ARHGAP5Q13017 1502 aa23.01■■□□□ 1.27
VPS26A-201ENST00000263559 MBD5Q9P267 1494 aa23■■□□□ 1.27
VPS26A-201ENST00000263559 ARHGEF5Q12774 1597 aa23■■□□□ 1.27
VPS26A-201ENST00000263559 SHANK2Q9UPX8 1470 aa22.99■■□□□ 1.27
VPS26A-201ENST00000263559 ANKRD30AQ9BXX3 1397 aa22.98■■□□□ 1.27
VPS26A-201ENST00000263559 C9orf84Q5VXU9 1444 aa22.97■■□□□ 1.27
VPS26A-201ENST00000263559 DENND4BO75064 1496 aaPredicted RBP22.97■■□□□ 1.27
VPS26A-201ENST00000263559 TSPY4P0CV99 314 aa22.96■■□□□ 1.27
VPS26A-201ENST00000263559 TSPY10P0CW01 314 aa22.96■■□□□ 1.27
VPS26A-201ENST00000263559 PLCH2O75038 1416 aa22.95■■□□□ 1.26
VPS26A-201ENST00000263559 ACIN1Q9UKV3 1341 aaKnown RBP22.95■■□□□ 1.26
VPS26A-201ENST00000263559 WDR7Q9Y4E6 1490 aa22.95■■□□□ 1.26
VPS26A-201ENST00000263559 MPHOSPH9Q99550 1183 aa22.94■■□□□ 1.26
VPS26A-201ENST00000263559 CCDC141Q6ZP82 1450 aa22.94■■□□□ 1.26
VPS26A-201ENST00000263559 SYCP2Q9BX26 1530 aa22.93■■□□□ 1.26
VPS26A-201ENST00000263559 RSPH4AQ5TD94 716 aa22.93■■□□□ 1.26
VPS26A-201ENST00000263559 TIMELESSQ9UNS1 1208 aa22.93■■□□□ 1.26
VPS26A-201ENST00000263559 ANKRD50Q9ULJ7 1429 aa22.89■■□□□ 1.25
VPS26A-201ENST00000263559 KIAA1107Q9UPP5 1409 aa22.89■■□□□ 1.25
VPS26A-201ENST00000263559 PLEKHH2Q8IVE3 1493 aa22.89■■□□□ 1.25
VPS26A-201ENST00000263559 ASXL2Q76L83 1435 aa22.88■■□□□ 1.25
VPS26A-201ENST00000263559 EFCAB2Q5VUJ9 269 aa22.88■■□□□ 1.25
VPS26A-201ENST00000263559 DIEXFQ68CQ4 756 aaKnown RBP22.87■■□□□ 1.25
VPS26A-201ENST00000263559 ARHGEF12Q9NZN5 1544 aa22.86■■□□□ 1.25
VPS26A-201ENST00000263559 NPM1P06748 294 aaKnown RBP eCLIP22.85■■□□□ 1.25
VPS26A-201ENST00000263559 KIF15Q9NS87 1388 aa22.85■■□□□ 1.25
VPS26A-201ENST00000263559 FOXD1Q16676 465 aa22.84■■□□□ 1.25
VPS26A-201ENST00000263559 ABCA9Q8IUA7 1624 aa22.83■■□□□ 1.25
VPS26A-201ENST00000263559 SLC4A1APQ9BWU0 796 aaKnown RBP22.83■■□□□ 1.25
VPS26A-201ENST00000263559 MAST1Q9Y2H9 1570 aa22.83■■□□□ 1.25
VPS26A-201ENST00000263559 ARAP3Q8WWN8 1544 aa22.83■■□□□ 1.25
VPS26A-201ENST00000263559 TONSLQ96HA7 1378 aa22.83■■□□□ 1.24
VPS26A-201ENST00000263559 PZPP20742 1482 aa22.83■■□□□ 1.24
VPS26A-201ENST00000263559 PPP1R15AO75807 674 aaPredicted RBP22.82■■□□□ 1.24
VPS26A-201ENST00000263559 ABCC1P33527 1531 aa22.81■■□□□ 1.24
VPS26A-201ENST00000263559 ANKRD30BQ9BXX2 1392 aa22.77■■□□□ 1.23
VPS26A-201ENST00000263559 TRAPPC8Q9Y2L5 1435 aa22.76■■□□□ 1.23
VPS26A-201ENST00000263559 PLXNC1O60486 1568 aa22.74■■□□□ 1.23
VPS26A-201ENST00000263559 FANCAO15360 1455 aa22.74■■□□□ 1.23
VPS26A-201ENST00000263559 NUP155O75694 1391 aa22.74■■□□□ 1.23
VPS26A-201ENST00000263559 KDM5DQ9BY66 1539 aa22.71■■□□□ 1.23
VPS26A-201ENST00000263559 PKD2Q13563 968 aa22.7■■□□□ 1.22
VPS26A-201ENST00000263559 RIMBP3CA6NJZ7 1639 aa22.7■■□□□ 1.22
VPS26A-201ENST00000263559 RIMBP3BA6NNM3 1639 aa22.7■■□□□ 1.22
VPS26A-201ENST00000263559 RIMBP3Q9UFD9 1639 aa22.7■■□□□ 1.22
VPS26A-201ENST00000263559 CYB5RLQ6IPT4 315 aa22.69■■□□□ 1.22
VPS26A-201ENST00000263559 AFAP1Q8N556 730 aa22.69■■□□□ 1.22
VPS26A-201ENST00000263559 RPRD2Q5VT52 1461 aaKnown RBP22.67■■□□□ 1.22
VPS26A-201ENST00000263559 DUOX2Q9NRD8 1548 aa22.66■■□□□ 1.22
VPS26A-201ENST00000263559 SPAG9O60271 1321 aaKnown RBP22.65■■□□□ 1.22
VPS26A-201ENST00000263559 ADGRL1O94910 1474 aa22.65■■□□□ 1.22
VPS26A-201ENST00000263559 SCAPERQ9BY12 1400 aa22.64■■□□□ 1.21
VPS26A-201ENST00000263559 RTEL1-TNFRSF6BF6WH68 1400 aa22.63■■□□□ 1.21
VPS26A-201ENST00000263559 CD109Q6YHK3 1445 aa22.63■■□□□ 1.21
VPS26A-201ENST00000263559 L3MBTL2Q969R5 705 aa22.63■■□□□ 1.21
VPS26A-201ENST00000263559 UNC13BO14795 1591 aa22.62■■□□□ 1.21
VPS26A-201ENST00000263559 ZFYVE16Q7Z3T8 1539 aa22.61■■□□□ 1.21
VPS26A-201ENST00000263559 ERBINQ96RT1 1412 aa22.61■■□□□ 1.21
VPS26A-201ENST00000263559 FAM135AQ9P2D6 1515 aa22.61■■□□□ 1.21
VPS26A-201ENST00000263559 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.57■■□□□ 1.2
VPS26A-201ENST00000263559 INO80Q9ULG1 1556 aaPredicted RBP22.57■■□□□ 1.2
VPS26A-201ENST00000263559 TEX14Q8IWB6 1497 aa22.57■■□□□ 1.2
VPS26A-201ENST00000263559 ATP7AQ04656 1500 aa22.56■■□□□ 1.2
VPS26A-201ENST00000263559 CFAP74Q9C0B2 1584 aa22.55■■□□□ 1.2
VPS26A-201ENST00000263559 IQGAP3Q86VI3 1631 aa22.54■■□□□ 1.2
VPS26A-201ENST00000263559 MAGI2Q86UL8 1455 aa22.53■■□□□ 1.2
VPS26A-201ENST00000263559 HIRIP3Q9BW71 556 aaPredicted RBP22.52■■□□□ 1.2
VPS26A-201ENST00000263559 MYT1LQ9UL68 1186 aa22.52■■□□□ 1.2
VPS26A-201ENST00000263559 MIER1Q8N108 512 aa22.5■■□□□ 1.19
VPS26A-201ENST00000263559 ZNF518AQ6AHZ1 1483 aa22.5■■□□□ 1.19
VPS26A-201ENST00000263559 KIDINS220Q9ULH0 1771 aa22.48■■□□□ 1.19
VPS26A-201ENST00000263559 NBPF8Q3BBV2 869 aa22.47■■□□□ 1.19
VPS26A-201ENST00000263559 MAP3K4Q9Y6R4 1608 aa22.46■■□□□ 1.19
VPS26A-201ENST00000263559 NEO1Q92859 1461 aa22.45■■□□□ 1.19
VPS26A-201ENST00000263559 POGZQ7Z3K3 1410 aa22.45■■□□□ 1.18
VPS26A-201ENST00000263559 GLI2P10070 1586 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms