RNA–Protein interactions for RNA: ENST00000262124.15

SEH1L-201, Transcript of SEH1 like nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEH1L, Length 3,494 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-201ENST00000262124 MAGI1Q96QZ7 1491 aaPredicted RBP17.25■□□□□ 0.35
SEH1L-201ENST00000262124 PTPRGP23470 1445 aa17.25■□□□□ 0.35
SEH1L-201ENST00000262124 UACAQ9BZF9 1416 aa17.25■□□□□ 0.35
SEH1L-201ENST00000262124 SENP3-EIF4A1A0A087X0R7 540 aa17.23■□□□□ 0.35
SEH1L-201ENST00000262124 TSPY4P0CV99 314 aa17.23■□□□□ 0.35
SEH1L-201ENST00000262124 TSPY10P0CW01 314 aa17.23■□□□□ 0.35
SEH1L-201ENST00000262124 KDM6BO15054 1643 aa17.21■□□□□ 0.35
SEH1L-201ENST00000262124 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.21■□□□□ 0.34
SEH1L-201ENST00000262124 PKD2Q13563 968 aa17.2■□□□□ 0.34
SEH1L-201ENST00000262124 HSPA5P11021 654 aaKnown RBP17.19■□□□□ 0.34
SEH1L-201ENST00000262124 ABCC5O15440 1437 aa17.18■□□□□ 0.34
SEH1L-201ENST00000262124 RAPGEF6Q8TEU7 1601 aa17.17■□□□□ 0.34
SEH1L-201ENST00000262124 ANP32CO43423 234 aa17.17■□□□□ 0.34
SEH1L-201ENST00000262124 DAPK1P53355 1430 aa17.17■□□□□ 0.34
SEH1L-201ENST00000262124 ARHGEF11O15085 1522 aa17.17■□□□□ 0.34
SEH1L-201ENST00000262124 RGL3Q3MIN7 710 aa17.17■□□□□ 0.34
SEH1L-201ENST00000262124 TROQ12816 1431 aaPredicted RBP17.17■□□□□ 0.34
SEH1L-201ENST00000262124 BCANQ96GW7 911 aa17.16■□□□□ 0.34
SEH1L-201ENST00000262124 NBPF8Q3BBV2 869 aa17.13■□□□□ 0.33
SEH1L-201ENST00000262124 KIF14Q15058 1648 aa17.13■□□□□ 0.33
SEH1L-201ENST00000262124 NUP160Q12769 1436 aa17.13■□□□□ 0.33
SEH1L-201ENST00000262124 MIA2Q96PC5 1412 aa17.12■□□□□ 0.33
SEH1L-201ENST00000262124 ATP10BO94823 1461 aa17.12■□□□□ 0.33
SEH1L-201ENST00000262124 NUP155O75694 1391 aa17.11■□□□□ 0.33
SEH1L-201ENST00000262124 GPATCH8Q9UKJ3 1502 aaKnown RBP17.11■□□□□ 0.33
SEH1L-201ENST00000262124 EIF4G2P78344 907 aaKnown RBP eCLIP17.11■□□□□ 0.33
SEH1L-201ENST00000262124 TIMELESSQ9UNS1 1208 aa17.1■□□□□ 0.33
SEH1L-201ENST00000262124 CAMSAP2Q08AD1 1489 aa17.09■□□□□ 0.33
SEH1L-201ENST00000262124 C11orf95C9JLR9 678 aaPredicted RBP17.08■□□□□ 0.32
SEH1L-201ENST00000262124 ERCC6L2Q5T890 1561 aa17.06■□□□□ 0.32
SEH1L-201ENST00000262124 SENP3Q9H4L4 574 aaPredicted RBP17.06■□□□□ 0.32
SEH1L-201ENST00000262124 TCOF1Q13428 1488 aaKnown RBP17.05■□□□□ 0.32
SEH1L-201ENST00000262124 ANKRD30AQ9BXX3 1397 aa17.05■□□□□ 0.32
SEH1L-201ENST00000262124 DENND4BO75064 1496 aaPredicted RBP17.04■□□□□ 0.32
SEH1L-201ENST00000262124 DCAF11Q8TEB1 546 aa17.04■□□□□ 0.32
SEH1L-201ENST00000262124 WASHC2AQ641Q2 1341 aa17.04■□□□□ 0.32
SEH1L-201ENST00000262124 NCOA1Q15788 1441 aa17.03■□□□□ 0.32
SEH1L-201ENST00000262124 ANKRD50Q9ULJ7 1429 aa17.02■□□□□ 0.31
SEH1L-201ENST00000262124 FAM9BQ8IZU0 186 aa17.02■□□□□ 0.31
SEH1L-201ENST00000262124 AFAP1Q8N556 730 aa17.01■□□□□ 0.31
SEH1L-201ENST00000262124 AKNAQ7Z591 1439 aa17■□□□□ 0.31
SEH1L-201ENST00000262124 KIF15Q9NS87 1388 aa16.99■□□□□ 0.31
SEH1L-201ENST00000262124 ANKRD30BQ9BXX2 1392 aa16.99■□□□□ 0.31
SEH1L-201ENST00000262124 HNRNPUQ00839 825 aaKnown RBP eCLIP16.98■□□□□ 0.31
SEH1L-201ENST00000262124 CCDC184Q52MB2 194 aa16.98■□□□□ 0.31
SEH1L-201ENST00000262124 C9orf84Q5VXU9 1444 aa16.98■□□□□ 0.31
SEH1L-201ENST00000262124 CHD1O14646 1710 aa16.97■□□□□ 0.31
SEH1L-201ENST00000262124 IRX6P78412 446 aaPredicted RBP16.95■□□□□ 0.3
SEH1L-201ENST00000262124 CARD11Q9BXL7 1154 aa16.95■□□□□ 0.3
SEH1L-201ENST00000262124 ROCK1Q13464 1354 aa16.94■□□□□ 0.3
SEH1L-201ENST00000262124 FKBP8Q14318 412 aa16.93■□□□□ 0.3
SEH1L-201ENST00000262124 ARHGAP5Q13017 1502 aa16.92■□□□□ 0.3
SEH1L-201ENST00000262124 DNMT1P26358 1616 aaKnown RBP16.92■□□□□ 0.3
SEH1L-201ENST00000262124 ABCA8O94911 1581 aa16.9■□□□□ 0.3
SEH1L-201ENST00000262124 EFCAB2Q5VUJ9 269 aa16.89■□□□□ 0.29
SEH1L-201ENST00000262124 MRS2Q9HD23 443 aa16.89■□□□□ 0.29
SEH1L-201ENST00000262124 SUPT16HQ9Y5B9 1047 aaKnown RBP16.89■□□□□ 0.29
SEH1L-201ENST00000262124 PZPP20742 1482 aa16.88■□□□□ 0.29
SEH1L-201ENST00000262124 ST20-MTHFSA0A0A6YYL1 179 aa16.87■□□□□ 0.29
SEH1L-201ENST00000262124 KIF7Q2M1P5 1343 aa16.87■□□□□ 0.29
SEH1L-201ENST00000262124 GCC2Q8IWJ2 1684 aa16.86■□□□□ 0.29
SEH1L-201ENST00000262124 ABCC10Q5T3U5 1492 aa16.86■□□□□ 0.29
SEH1L-201ENST00000262124 SALL2Q9Y467 1007 aaPredicted RBP16.86■□□□□ 0.29
SEH1L-201ENST00000262124 NPM1P06748 294 aaKnown RBP eCLIP16.86■□□□□ 0.29
SEH1L-201ENST00000262124 NBPF1Q3BBV0 1214 aa16.86■□□□□ 0.29
SEH1L-201ENST00000262124 KIAA1107Q9UPP5 1409 aa16.85■□□□□ 0.29
SEH1L-201ENST00000262124 RPRD2Q5VT52 1461 aaKnown RBP16.85■□□□□ 0.29
SEH1L-201ENST00000262124 CHGAP10645 457 aaKnown RBP16.84■□□□□ 0.29
SEH1L-201ENST00000262124 KDM5BQ9UGL1 1544 aa16.84■□□□□ 0.29
SEH1L-201ENST00000262124 SYCP2Q9BX26 1530 aa16.83■□□□□ 0.29
SEH1L-201ENST00000262124 SPAG9O60271 1321 aaKnown RBP16.83■□□□□ 0.28
SEH1L-201ENST00000262124 KIF3BO15066 747 aa16.83■□□□□ 0.28
SEH1L-201ENST00000262124 CDC42BPAQ5VT25 1732 aa16.82■□□□□ 0.28
SEH1L-201ENST00000262124 USP47Q96K76 1375 aa16.82■□□□□ 0.28
SEH1L-201ENST00000262124 OSCARQ8IYS5 282 aa16.82■□□□□ 0.28
SEH1L-201ENST00000262124 CCDC7Q96M83 1385 aa16.81■□□□□ 0.28
SEH1L-201ENST00000262124 PLEKHH2Q8IVE3 1493 aa16.81■□□□□ 0.28
SEH1L-201ENST00000262124 ITSN2Q9NZM3 1697 aa16.8■□□□□ 0.28
SEH1L-201ENST00000262124 NEFLP07196 543 aa16.8■□□□□ 0.28
SEH1L-201ENST00000262124 CYB5RLQ6IPT4 315 aa16.79■□□□□ 0.28
SEH1L-201ENST00000262124 PRKRIP1Q9H875 184 aaPredicted RBP16.79■□□□□ 0.28
SEH1L-201ENST00000262124 MBD5Q9P267 1494 aa16.78■□□□□ 0.28
SEH1L-201ENST00000262124 TTC37Q6PGP7 1564 aa16.78■□□□□ 0.28
SEH1L-201ENST00000262124 CCER2I3L3R5 266 aa16.78■□□□□ 0.28
SEH1L-201ENST00000262124 GGT6Q6P531 493 aa16.78■□□□□ 0.28
SEH1L-201ENST00000262124 CCDC141Q6ZP82 1450 aa16.78■□□□□ 0.28
SEH1L-201ENST00000262124 TRAPPC8Q9Y2L5 1435 aa16.77■□□□□ 0.27
SEH1L-201ENST00000262124 ROCK2O75116 1388 aaKnown RBP16.76■□□□□ 0.27
SEH1L-201ENST00000262124 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.76■□□□□ 0.272e-7■■■■□ 26.2
SEH1L-201ENST00000262124 TEX14Q8IWB6 1497 aa16.76■□□□□ 0.27
SEH1L-201ENST00000262124 NUTM2DQ5VT03 806 aaPredicted RBP16.75■□□□□ 0.27
SEH1L-201ENST00000262124 SAMD9LQ8IVG5 1584 aa16.75■□□□□ 0.27
SEH1L-201ENST00000262124 CCDC144AA2RUR9 1427 aa16.75■□□□□ 0.27
SEH1L-201ENST00000262124 RSPH4AQ5TD94 716 aa16.75■□□□□ 0.27
SEH1L-201ENST00000262124 SCAPERQ9BY12 1400 aa16.73■□□□□ 0.27
SEH1L-201ENST00000262124 ABCC2Q92887 1545 aa16.72■□□□□ 0.27
SEH1L-201ENST00000262124 ARHGEF12Q9NZN5 1544 aa16.72■□□□□ 0.27
SEH1L-201ENST00000262124 CC2D1BQ5T0F9 858 aaKnown RBP16.71■□□□□ 0.27
SEH1L-201ENST00000262124 CDC42BPBQ9Y5S2 1711 aa16.7■□□□□ 0.26
SEH1L-201ENST00000262124 ADGRL2O95490 1459 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms