RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 ROCK1Q13464 1354 aa31.89■■■□□ 2.7
MCF2L-201ENST00000261963 CDK11AQ9UQ88 783 aaPredicted RBP31.89■■■□□ 2.7
MCF2L-201ENST00000261963 ZNF644Q9H582 1327 aaPredicted RBP31.88■■■□□ 2.69
MCF2L-201ENST00000261963 NUP160Q12769 1436 aa31.88■■■□□ 2.69
MCF2L-201ENST00000261963 DNMT1P26358 1616 aaKnown RBP31.88■■■□□ 2.69
MCF2L-201ENST00000261963 PLB1Q6P1J6 1458 aa31.87■■■□□ 2.69
MCF2L-201ENST00000261963 PRG4Q92954 1404 aaPredicted RBP31.86■■■□□ 2.69
MCF2L-201ENST00000261963 MPHOSPH9Q99550 1183 aa31.86■■■□□ 2.69
MCF2L-201ENST00000261963 TROQ12816 1431 aaPredicted RBP31.85■■■□□ 2.69
MCF2L-201ENST00000261963 FBLN2P98095 1184 aa31.84■■■□□ 2.69
MCF2L-201ENST00000261963 JPH4Q96JJ6 628 aa31.79■■■□□ 2.68
MCF2L-201ENST00000261963 CARMIL2Q6F5E8 1435 aa31.78■■■□□ 2.68
MCF2L-201ENST00000261963 FOXD1Q16676 465 aa31.74■■■□□ 2.67
MCF2L-201ENST00000261963 GPATCH8Q9UKJ3 1502 aaKnown RBP31.73■■■□□ 2.67
MCF2L-201ENST00000261963 CAMSAP2Q08AD1 1489 aa31.73■■■□□ 2.67
MCF2L-201ENST00000261963 KIF14Q15058 1648 aa31.72■■■□□ 2.67
MCF2L-201ENST00000261963 ADCY10Q96PN6 1610 aa31.72■■■□□ 2.67
MCF2L-201ENST00000261963 CCER2I3L3R5 266 aa31.7■■■□□ 2.67
MCF2L-201ENST00000261963 CFDP1Q9UEE9 299 aaPredicted RBP31.7■■■□□ 2.67
MCF2L-201ENST00000261963 ANKRD30BQ9BXX2 1392 aa31.69■■■□□ 2.66
MCF2L-201ENST00000261963 ANP32CO43423 234 aa31.69■■■□□ 2.66
MCF2L-201ENST00000261963 ITSN2Q9NZM3 1697 aa31.68■■■□□ 2.66
MCF2L-201ENST00000261963 L3MBTL2Q969R5 705 aa31.66■■■□□ 2.66
MCF2L-201ENST00000261963 ABCA8O94911 1581 aa31.64■■■□□ 2.66
MCF2L-201ENST00000261963 HSPA5P11021 654 aaKnown RBP31.63■■■□□ 2.65
MCF2L-201ENST00000261963 RPRD2Q5VT52 1461 aaKnown RBP31.62■■■□□ 2.65
MCF2L-201ENST00000261963 NCOA1Q15788 1441 aa31.62■■■□□ 2.65
MCF2L-201ENST00000261963 BCANQ96GW7 911 aa31.61■■■□□ 2.65
MCF2L-201ENST00000261963 ADGRL2O95490 1459 aa31.58■■■□□ 2.65
MCF2L-201ENST00000261963 SLC4A1APQ9BWU0 796 aaKnown RBP31.58■■■□□ 2.65
MCF2L-201ENST00000261963 PZPP20742 1482 aa31.57■■■□□ 2.64
MCF2L-201ENST00000261963 ZNF777Q9ULD5 760 aaPredicted RBP31.57■■■□□ 2.64
MCF2L-201ENST00000261963 ATP10BO94823 1461 aa31.56■■■□□ 2.64
MCF2L-201ENST00000261963 TEX14Q8IWB6 1497 aa31.56■■■□□ 2.64
MCF2L-201ENST00000261963 FKBP8Q14318 412 aa31.56■■■□□ 2.64
MCF2L-201ENST00000261963 ADGBQ8N7X0 1667 aa31.56■■■□□ 2.64
MCF2L-201ENST00000261963 WASHC2AQ641Q2 1341 aa31.56■■■□□ 2.64
MCF2L-201ENST00000261963 CROCC2H7BZ55 1655 aa31.54■■■□□ 2.64
MCF2L-201ENST00000261963 ABCC10Q5T3U5 1492 aa31.53■■■□□ 2.64
MCF2L-201ENST00000261963 EIF4G2P78344 907 aaKnown RBP eCLIP31.53■■■□□ 2.64
MCF2L-201ENST00000261963 PLEKHD1A6NEE1 506 aa31.52■■■□□ 2.64
MCF2L-201ENST00000261963 RBM19Q9Y4C8 960 aaKnown RBP31.49■■■□□ 2.63
MCF2L-201ENST00000261963 NBPF8Q3BBV2 869 aa31.49■■■□□ 2.63
MCF2L-201ENST00000261963 CDC42BPAQ5VT25 1732 aa31.47■■■□□ 2.63
MCF2L-201ENST00000261963 ANKRD30AQ9BXX3 1397 aa31.46■■■□□ 2.63
MCF2L-201ENST00000261963 PTPRGP23470 1445 aa31.4■■■□□ 2.62
MCF2L-201ENST00000261963 ANKRD50Q9ULJ7 1429 aa31.4■■■□□ 2.62
MCF2L-201ENST00000261963 KIAA1107Q9UPP5 1409 aa31.4■■■□□ 2.62
MCF2L-201ENST00000261963 SHANK2Q9UPX8 1470 aa31.4■■■□□ 2.62
MCF2L-201ENST00000261963 NEFLP07196 543 aa31.39■■■□□ 2.62
MCF2L-201ENST00000261963 C11orf95C9JLR9 678 aaPredicted RBP31.38■■■□□ 2.61
MCF2L-201ENST00000261963 C9orf84Q5VXU9 1444 aa31.36■■■□□ 2.61
MCF2L-201ENST00000261963 SPATA31E1Q6ZUB1 1445 aa31.35■■■□□ 2.61
MCF2L-201ENST00000261963 CNTLNQ9NXG0 1405 aa31.34■■■□□ 2.61
MCF2L-201ENST00000261963 CCDC7Q96M83 1385 aa31.34■■■□□ 2.61
MCF2L-201ENST00000261963 PKD2Q13563 968 aa31.33■■■□□ 2.61
MCF2L-201ENST00000261963 MBD5Q9P267 1494 aa31.32■■■□□ 2.6
MCF2L-201ENST00000261963 CHD1O14646 1710 aa31.27■■■□□ 2.6
MCF2L-201ENST00000261963 ARHGEF5Q12774 1597 aa31.25■■■□□ 2.59
MCF2L-201ENST00000261963 HNRNPMP52272 730 aaKnown RBP eCLIP31.24■■■□□ 2.59
MCF2L-201ENST00000261963 NUP155O75694 1391 aa31.24■■■□□ 2.59
MCF2L-201ENST00000261963 TSPY4P0CV99 314 aa31.24■■■□□ 2.59
MCF2L-201ENST00000261963 TSPY10P0CW01 314 aa31.24■■■□□ 2.59
MCF2L-201ENST00000261963 KDM5DQ9BY66 1539 aa31.22■■■□□ 2.59
MCF2L-201ENST00000261963 KIF15Q9NS87 1388 aa31.21■■■□□ 2.59
MCF2L-201ENST00000261963 KIF7Q2M1P5 1343 aa31.21■■■□□ 2.59
MCF2L-201ENST00000261963 SHROOM2Q13796 1616 aa31.2■■■□□ 2.59
MCF2L-201ENST00000261963 SAMD9LQ8IVG5 1584 aa31.19■■■□□ 2.58
MCF2L-201ENST00000261963 PREX2Q70Z35 1606 aa31.18■■■□□ 2.58
MCF2L-201ENST00000261963 CDC42BPBQ9Y5S2 1711 aa31.17■■■□□ 2.58
MCF2L-201ENST00000261963 CCDC141Q6ZP82 1450 aa31.15■■■□□ 2.58
MCF2L-201ENST00000261963 MSH5O43196 834 aa31.15■■■□□ 2.58
MCF2L-201ENST00000261963 POLR1AO95602 1720 aaPredicted RBP31.14■■■□□ 2.58
MCF2L-201ENST00000261963 PRKRIP1Q9H875 184 aaPredicted RBP31.14■■■□□ 2.58
MCF2L-201ENST00000261963 CCDC184Q52MB2 194 aa31.12■■■□□ 2.57
MCF2L-201ENST00000261963 HNRNPUQ00839 825 aaKnown RBP eCLIP31.12■■■□□ 2.57
MCF2L-201ENST00000261963 ERCC6L2Q5T890 1561 aa31.1■■■□□ 2.57
MCF2L-201ENST00000261963 UHRF1BP1Q6BDS2 1440 aa31.1■■■□□ 2.57
MCF2L-201ENST00000261963 USP47Q96K76 1375 aa31.09■■■□□ 2.57
MCF2L-201ENST00000261963 ZNF326Q5BKZ1 582 aaKnown RBP31.08■■■□□ 2.57
MCF2L-201ENST00000261963 TTC37Q6PGP7 1564 aa31.08■■■□□ 2.57
MCF2L-201ENST00000261963 RSPH4AQ5TD94 716 aa31.06■■■□□ 2.56
MCF2L-201ENST00000261963 FANCIQ9NVI1 1328 aa31.05■■■□□ 2.56
MCF2L-201ENST00000261963 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.05■■■□□ 2.56
MCF2L-201ENST00000261963 ABCC2Q92887 1545 aa31.05■■■□□ 2.56
MCF2L-201ENST00000261963 ARHGEF12Q9NZN5 1544 aa31.05■■■□□ 2.56
MCF2L-201ENST00000261963 SYCP2Q9BX26 1530 aa31.04■■■□□ 2.56
MCF2L-201ENST00000261963 KDM5CP41229 1560 aa31.03■■■□□ 2.56
MCF2L-201ENST00000261963 RALGAPBQ86X10 1494 aa31.03■■■□□ 2.56
MCF2L-201ENST00000261963 BCORL1Q5H9F3 1711 aa31.03■■■□□ 2.56
MCF2L-201ENST00000261963 ARHGAP5Q13017 1502 aa31.01■■■□□ 2.55
MCF2L-201ENST00000261963 FAM135AQ9P2D6 1515 aa31■■■□□ 2.55
MCF2L-201ENST00000261963 MAST1Q9Y2H9 1570 aa30.99■■■□□ 2.55
MCF2L-201ENST00000261963 ERICH6Q7L0X2 663 aa30.98■■■□□ 2.55
MCF2L-201ENST00000261963 DHX29Q7Z478 1369 aaKnown RBP30.96■■■□□ 2.55
MCF2L-201ENST00000261963 MRS2Q9HD23 443 aa30.95■■■□□ 2.54
MCF2L-201ENST00000261963 ARID4BQ4LE39 1312 aaPredicted RBP30.92■■■□□ 2.54
MCF2L-201ENST00000261963 CARD11Q9BXL7 1154 aa30.9■■■□□ 2.54
MCF2L-201ENST00000261963 MYO5CQ9NQX4 1742 aa30.9■■■□□ 2.54
MCF2L-201ENST00000261963 UNC13BO14795 1591 aa30.89■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms