RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 ZNF326Q5BKZ1 582 aaKnown RBP21.68■■□□□ 1.06
LMNB1-201ENST00000261366 ZBED9Q6R2W3 1325 aa21.68■■□□□ 1.06
LMNB1-201ENST00000261366 CCDC7Q96M83 1385 aa21.68■■□□□ 1.06
LMNB1-201ENST00000261366 AKNAQ7Z591 1439 aa21.67■■□□□ 1.06
LMNB1-201ENST00000261366 NBPF8Q3BBV2 869 aa21.67■■□□□ 1.06
LMNB1-201ENST00000261366 PBRM1Q86U86 1689 aa21.67■■□□□ 1.06
LMNB1-201ENST00000261366 IFT140Q96RY7 1462 aa21.67■■□□□ 1.06
LMNB1-201ENST00000261366 CCDC136Q96JN2 1154 aa21.66■■□□□ 1.06
LMNB1-201ENST00000261366 WDR62O43379 1518 aa21.63■■□□□ 1.05
LMNB1-201ENST00000261366 ADAMTS12P58397 1594 aa21.63■■□□□ 1.05
LMNB1-201ENST00000261366 KIF7Q2M1P5 1343 aa21.62■■□□□ 1.05
LMNB1-201ENST00000261366 FBLN2P98095 1184 aa21.62■■□□□ 1.05
LMNB1-201ENST00000261366 DENND4BO75064 1496 aaPredicted RBP21.6■■□□□ 1.05
LMNB1-201ENST00000261366 IQGAP2Q13576 1575 aa21.6■■□□□ 1.05
LMNB1-201ENST00000261366 NPM2Q86SE8 214 aaKnown RBP21.58■■□□□ 1.05
LMNB1-201ENST00000261366 KDM6BO15054 1643 aa21.58■■□□□ 1.04
LMNB1-201ENST00000261366 LRRIQ1Q96JM4 1722 aa21.57■■□□□ 1.04
LMNB1-201ENST00000261366 CHMP7Q8WUX9 453 aaPredicted RBP21.57■■□□□ 1.04
LMNB1-201ENST00000261366 NCOA1Q15788 1441 aa21.57■■□□□ 1.04
LMNB1-201ENST00000261366 ANP32AP39687 249 aaKnown RBP21.56■■□□□ 1.04
LMNB1-201ENST00000261366 SALL2Q9Y467 1007 aaPredicted RBP21.55■■□□□ 1.04
LMNB1-201ENST00000261366 SLC4A1APQ9BWU0 796 aaKnown RBP21.54■■□□□ 1.04
LMNB1-201ENST00000261366 MYT1LQ9UL68 1186 aa21.53■■□□□ 1.04
LMNB1-201ENST00000261366 MAGI3Q5TCQ9 1506 aa21.52■■□□□ 1.03
LMNB1-201ENST00000261366 RTL5Q5HYW3 569 aaPredicted RBP21.51■■□□□ 1.03
LMNB1-201ENST00000261366 ZBTB47Q9UFB7 747 aaPredicted RBP21.51■■□□□ 1.03
LMNB1-201ENST00000261366 NUDCQ9Y266 331 aa21.5■■□□□ 1.03
LMNB1-201ENST00000261366 EIF4G3O43432 1585 aaKnown RBP21.49■■□□□ 1.03
LMNB1-201ENST00000261366 SUPT6HQ7KZ85 1726 aaKnown RBP21.49■■□□□ 1.03
LMNB1-201ENST00000261366 EPRSP07814 1512 aaKnown RBP21.48■■□□□ 1.03
LMNB1-201ENST00000261366 CDK13Q14004 1512 aaKnown RBP21.48■■□□□ 1.03
LMNB1-201ENST00000261366 KIAA0586Q9BVV6 1533 aa21.48■■□□□ 1.03
LMNB1-201ENST00000261366 IPO9Q96P70 1041 aaKnown RBP21.48■■□□□ 1.03
LMNB1-201ENST00000261366 GRIN2AQ12879 1464 aa21.48■■□□□ 1.03
LMNB1-201ENST00000261366 ZNF644Q9H582 1327 aaPredicted RBP21.47■■□□□ 1.03
LMNB1-201ENST00000261366 THOC2Q8NI27 1593 aaKnown RBP21.47■■□□□ 1.03
LMNB1-201ENST00000261366 EHBP1L1Q8N3D4 1523 aa21.46■■□□□ 1.03
LMNB1-201ENST00000261366 UGGT2Q9NYU1 1516 aa21.45■■□□□ 1.02
LMNB1-201ENST00000261366 TMC1Q8TDI8 760 aa21.44■■□□□ 1.02
LMNB1-201ENST00000261366 RTN4Q9NQC3 1192 aaKnown RBP21.44■■□□□ 1.02
LMNB1-201ENST00000261366 LAS1LQ9Y4W2 734 aaKnown RBP21.43■■□□□ 1.02
LMNB1-201ENST00000261366 HECW1Q76N89 1606 aa21.43■■□□□ 1.02
LMNB1-201ENST00000261366 DISP1Q96F81 1524 aa21.43■■□□□ 1.02
LMNB1-201ENST00000261366 SMG6Q86US8 1419 aaKnown RBP21.42■■□□□ 1.02
LMNB1-201ENST00000261366 ANKRD30BQ9BXX2 1392 aa21.41■■□□□ 1.02
LMNB1-201ENST00000261366 JPH4Q96JJ6 628 aa21.37■■□□□ 1.01
LMNB1-201ENST00000261366 MAGI1Q96QZ7 1491 aaPredicted RBP21.37■■□□□ 1.01
LMNB1-201ENST00000261366 ARHGEF11O15085 1522 aa21.36■■□□□ 1.01
LMNB1-201ENST00000261366 EXOC6Q8TAG9 804 aa21.36■■□□□ 1.01
LMNB1-201ENST00000261366 ANO8Q9HCE9 1232 aaPredicted RBP21.36■■□□□ 1.01
LMNB1-201ENST00000261366 SYNJ2O15056 1496 aa21.36■■□□□ 1.01
LMNB1-201ENST00000261366 IL27Q8NEV9 243 aa21.36■■□□□ 1.01
LMNB1-201ENST00000261366 KIAA0556O60303 1618 aa21.36■■□□□ 1.01
LMNB1-201ENST00000261366 RPRD2Q5VT52 1461 aaKnown RBP21.36■■□□□ 1.01
LMNB1-201ENST00000261366 SPATA31E1Q6ZUB1 1445 aa21.35■■□□□ 1.01
LMNB1-201ENST00000261366 ZNF777Q9ULD5 760 aaPredicted RBP21.35■■□□□ 1.01
LMNB1-201ENST00000261366 DHX29Q7Z478 1369 aaKnown RBP21.35■■□□□ 1.01
LMNB1-201ENST00000261366 USP47Q96K76 1375 aa21.34■■□□□ 1.01
LMNB1-201ENST00000261366 SKAP1Q86WV1 359 aa21.34■■□□□ 1.01
LMNB1-201ENST00000261366 KDM2AQ9Y2K7 1162 aa21.34■■□□□ 1.01
LMNB1-201ENST00000261366 TEX14Q8IWB6 1497 aa21.33■■□□□ 1.01
LMNB1-201ENST00000261366 PNISRQ8TF01 805 aaKnown RBP21.33■■□□□ 1
LMNB1-201ENST00000261366 NUP153P49790 1475 aaKnown RBP21.33■■□□□ 1
LMNB1-201ENST00000261366 GCC2Q8IWJ2 1684 aa21.32■■□□□ 1
LMNB1-201ENST00000261366 CEP170Q5SW79 1584 aa21.31■■□□□ 1
LMNB1-201ENST00000261366 TCOF1Q13428 1488 aaKnown RBP21.3■■□□□ 1
LMNB1-201ENST00000261366 PLB1Q6P1J6 1458 aa21.29■■□□□ 1
LMNB1-201ENST00000261366 NEFMP07197 916 aa21.29■■□□□ 1
LMNB1-201ENST00000261366 RNF123Q5XPI4 1314 aa21.29■■□□□ 1
LMNB1-201ENST00000261366 PKD2Q13563 968 aa21.27■■□□□ 1
LMNB1-201ENST00000261366 DAPK1P53355 1430 aa21.26■□□□□ 0.99
LMNB1-201ENST00000261366 PRG4Q92954 1404 aaPredicted RBP21.26■□□□□ 0.99
LMNB1-201ENST00000261366 MIA2Q96PC5 1412 aa21.26■□□□□ 0.99
LMNB1-201ENST00000261366 CARD11Q9BXL7 1154 aa21.26■□□□□ 0.99
LMNB1-201ENST00000261366 RRP1P56182 461 aaKnown RBP21.25■□□□□ 0.99
LMNB1-201ENST00000261366 PLIN1O60240 522 aa21.25■□□□□ 0.99
LMNB1-201ENST00000261366 PDE4AP27815 886 aa21.24■□□□□ 0.99
LMNB1-201ENST00000261366 RAPGEF6Q8TEU7 1601 aa21.24■□□□□ 0.99
LMNB1-201ENST00000261366 ABCC5O15440 1437 aa21.23■□□□□ 0.99
LMNB1-201ENST00000261366 CARMIL2Q6F5E8 1435 aa21.23■□□□□ 0.99
LMNB1-201ENST00000261366 NUP160Q12769 1436 aa21.22■□□□□ 0.99
LMNB1-201ENST00000261366 RCAN3Q9UKA8 241 aa21.22■□□□□ 0.99
LMNB1-201ENST00000261366 ST20-MTHFSA0A0A6YYL1 179 aa21.22■□□□□ 0.99
LMNB1-201ENST00000261366 CDCA7LQ96GN5 454 aa21.21■□□□□ 0.99
LMNB1-201ENST00000261366 PRKCSHP14314 528 aaPredicted RBP21.2■□□□□ 0.98
LMNB1-201ENST00000261366 BCORL1Q5H9F3 1711 aa21.2■□□□□ 0.98
LMNB1-201ENST00000261366 CFDP1Q9UEE9 299 aaPredicted RBP21.2■□□□□ 0.98
LMNB1-201ENST00000261366 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.16■□□□□ 0.98
LMNB1-201ENST00000261366 SLC4A3P48751 1232 aa21.16■□□□□ 0.98
LMNB1-201ENST00000261366 TROQ12816 1431 aaPredicted RBP21.15■□□□□ 0.98
LMNB1-201ENST00000261366 TCERG1O14776 1098 aaKnown RBP21.15■□□□□ 0.98
LMNB1-201ENST00000261366 DCAF11Q8TEB1 546 aa21.14■□□□□ 0.97
LMNB1-201ENST00000261366 PLEKHD1A6NEE1 506 aa21.13■□□□□ 0.97
LMNB1-201ENST00000261366 BACH2Q9BYV9 841 aa21.13■□□□□ 0.97
LMNB1-201ENST00000261366 ROCK1Q13464 1354 aa21.12■□□□□ 0.97
LMNB1-201ENST00000261366 PZPP20742 1482 aa21.12■□□□□ 0.97
LMNB1-201ENST00000261366 MYBBP1AQ9BQG0 1328 aaKnown RBP21.12■□□□□ 0.97
LMNB1-201ENST00000261366 KIF15Q9NS87 1388 aa21.11■□□□□ 0.97
LMNB1-201ENST00000261366 CC2D1BQ5T0F9 858 aaKnown RBP21.11■□□□□ 0.97
LMNB1-201ENST00000261366 GPATCH8Q9UKJ3 1502 aaKnown RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms