RNA–Protein interactions for RNA: ENST00000258418.9

CAB39-201, Transcript of calcium binding protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAB39, Length 3,826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-201ENST00000258418 URB2Q14146 1524 aaKnown RBP19.77■□□□□ 0.75
CAB39-201ENST00000258418 ABCA10Q8WWZ4 1543 aa19.77■□□□□ 0.75
CAB39-201ENST00000258418 NAIPQ13075 1403 aa19.76■□□□□ 0.75
CAB39-201ENST00000258418 DNMBPQ6XZF7 1577 aa19.76■□□□□ 0.75
CAB39-201ENST00000258418 PPP4R2Q9NY27 417 aa19.74■□□□□ 0.75
CAB39-201ENST00000258418 KIF7Q2M1P5 1343 aa19.73■□□□□ 0.75
CAB39-201ENST00000258418 TNNT2P45379 298 aaPredicted RBP19.73■□□□□ 0.75
CAB39-201ENST00000258418 RTL5Q5HYW3 569 aaPredicted RBP19.73■□□□□ 0.75
CAB39-201ENST00000258418 PRG4Q92954 1404 aaPredicted RBP19.72■□□□□ 0.75
CAB39-201ENST00000258418 PRDM2Q13029 1718 aa19.71■□□□□ 0.75
CAB39-201ENST00000258418 HFM1A2PYH4 1435 aa19.71■□□□□ 0.75
CAB39-201ENST00000258418 ANP32AP39687 249 aaKnown RBP19.71■□□□□ 0.75
CAB39-201ENST00000258418 ANKRD30AQ9BXX3 1397 aa19.7■□□□□ 0.74
CAB39-201ENST00000258418 CANXP27824 592 aaKnown RBP19.7■□□□□ 0.74
CAB39-201ENST00000258418 CARMIL2Q6F5E8 1435 aa19.68■□□□□ 0.74
CAB39-201ENST00000258418 WDR43Q15061 677 aaKnown RBP eCLIP19.68■□□□□ 0.74
CAB39-201ENST00000258418 NEUROD2Q15784 382 aa19.68■□□□□ 0.74
CAB39-201ENST00000258418 PLPPR3Q6T4P5 718 aa19.67■□□□□ 0.74
CAB39-201ENST00000258418 ROCK2O75116 1388 aaKnown RBP19.66■□□□□ 0.74
CAB39-201ENST00000258418 CCDC7Q96M83 1385 aa19.66■□□□□ 0.74
CAB39-201ENST00000258418 USP47Q96K76 1375 aa19.65■□□□□ 0.74
CAB39-201ENST00000258418 ZNF608Q9ULD9 1512 aaPredicted RBP19.63■□□□□ 0.73
CAB39-201ENST00000258418 EFCAB5A4FU69 1503 aa19.63■□□□□ 0.73
CAB39-201ENST00000258418 KNSTRNQ9Y448 316 aa19.61■□□□□ 0.73
CAB39-201ENST00000258418 NPM1P06748 294 aaKnown RBP eCLIP19.6■□□□□ 0.73
CAB39-201ENST00000258418 GRIN2BQ13224 1484 aa19.6■□□□□ 0.73
CAB39-201ENST00000258418 EPRSP07814 1512 aaKnown RBP19.59■□□□□ 0.73
CAB39-201ENST00000258418 SAFB2Q14151 953 aaKnown RBP eCLIP19.59■□□□□ 0.734e-6■■■□□ 19
CAB39-201ENST00000258418 NUTM2DQ5VT03 806 aaPredicted RBP19.57■□□□□ 0.72
CAB39-201ENST00000258418 NBPF1Q3BBV0 1214 aa19.57■□□□□ 0.72
CAB39-201ENST00000258418 PLIN1O60240 522 aa19.56■□□□□ 0.72
CAB39-201ENST00000258418 SNAPC4Q5SXM2 1469 aa19.56■□□□□ 0.72
CAB39-201ENST00000258418 PTPRGP23470 1445 aa19.55■□□□□ 0.72
CAB39-201ENST00000258418 ZBTB47Q9UFB7 747 aaPredicted RBP19.55■□□□□ 0.72
CAB39-201ENST00000258418 PLB1Q6P1J6 1458 aa19.54■□□□□ 0.72
CAB39-201ENST00000258418 GGT6Q6P531 493 aa19.54■□□□□ 0.72
CAB39-201ENST00000258418 ANKRD50Q9ULJ7 1429 aa19.52■□□□□ 0.72
CAB39-201ENST00000258418 TMF1P82094 1093 aa19.52■□□□□ 0.72
CAB39-201ENST00000258418 MAP3K1Q13233 1512 aa19.52■□□□□ 0.72
CAB39-201ENST00000258418 KIF3BO15066 747 aa19.52■□□□□ 0.71
CAB39-201ENST00000258418 EHBP1L1Q8N3D4 1523 aa19.52■□□□□ 0.71
CAB39-201ENST00000258418 CNTLNQ9NXG0 1405 aa19.51■□□□□ 0.71
CAB39-201ENST00000258418 PANK3Q9H999 370 aa19.51■□□□□ 0.71
CAB39-201ENST00000258418 NUDCQ9Y266 331 aa19.51■□□□□ 0.71
CAB39-201ENST00000258418 KIF15Q9NS87 1388 aa19.51■□□□□ 0.71
CAB39-201ENST00000258418 STAG3Q9UJ98 1225 aa19.5■□□□□ 0.71
CAB39-201ENST00000258418 DAPK1P53355 1430 aa19.49■□□□□ 0.71
CAB39-201ENST00000258418 CCDC146Q8IYE0 955 aa19.49■□□□□ 0.71
CAB39-201ENST00000258418 LAS1LQ9Y4W2 734 aaKnown RBP19.49■□□□□ 0.71
CAB39-201ENST00000258418 RGS3P49796 1198 aa19.49■□□□□ 0.71
CAB39-201ENST00000258418 PTPN23Q9H3S7 1636 aa19.48■□□□□ 0.71
CAB39-201ENST00000258418 MRC2Q9UBG0 1479 aa19.48■□□□□ 0.71
CAB39-201ENST00000258418 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.48■□□□□ 0.713e-6■■□□□ 11.4
CAB39-201ENST00000258418 SUPT6HQ7KZ85 1726 aaKnown RBP19.47■□□□□ 0.71
CAB39-201ENST00000258418 EFCAB2Q5VUJ9 269 aa19.47■□□□□ 0.71
CAB39-201ENST00000258418 RCAN3Q9UKA8 241 aa19.47■□□□□ 0.71
CAB39-201ENST00000258418 ZBED9Q6R2W3 1325 aa19.47■□□□□ 0.71
CAB39-201ENST00000258418 THOC2Q8NI27 1593 aaKnown RBP19.46■□□□□ 0.71
CAB39-201ENST00000258418 ABCC5O15440 1437 aa19.46■□□□□ 0.71
CAB39-201ENST00000258418 AFAP1Q8N556 730 aa19.46■□□□□ 0.71
CAB39-201ENST00000258418 KTN1Q86UP2 1357 aaKnown RBP19.45■□□□□ 0.7
CAB39-201ENST00000258418 EXOC6Q8TAG9 804 aa19.44■□□□□ 0.7
CAB39-201ENST00000258418 IQGAP2Q13576 1575 aa19.44■□□□□ 0.7
CAB39-201ENST00000258418 ANKRD30BQ9BXX2 1392 aa19.44■□□□□ 0.7
CAB39-201ENST00000258418 CDCA7LQ96GN5 454 aa19.43■□□□□ 0.7
CAB39-201ENST00000258418 LAMC3Q9Y6N6 1575 aa19.43■□□□□ 0.7
CAB39-201ENST00000258418 CCDC144AA2RUR9 1427 aa19.43■□□□□ 0.7
CAB39-201ENST00000258418 AKNAQ7Z591 1439 aa19.43■□□□□ 0.7
CAB39-201ENST00000258418 CUL7Q14999 1698 aa19.43■□□□□ 0.7
CAB39-201ENST00000258418 FRAT1Q92837 279 aaPredicted RBP19.42■□□□□ 0.7
CAB39-201ENST00000258418 PPM1GO15355 546 aaPredicted RBP19.42■□□□□ 0.7
CAB39-201ENST00000258418 MIA2Q96PC5 1412 aa19.41■□□□□ 0.7
CAB39-201ENST00000258418 TROQ12816 1431 aaPredicted RBP19.4■□□□□ 0.7
CAB39-201ENST00000258418 NLRP13Q86W25 1043 aa19.4■□□□□ 0.7
CAB39-201ENST00000258418 STK26Q9P289 416 aa19.4■□□□□ 0.7
CAB39-201ENST00000258418 SPAG9O60271 1321 aaKnown RBP19.4■□□□□ 0.7
CAB39-201ENST00000258418 RALBP1Q15311 655 aa19.38■□□□□ 0.69
CAB39-201ENST00000258418 HECW1Q76N89 1606 aa19.38■□□□□ 0.69
CAB39-201ENST00000258418 NOP58Q9Y2X3 529 aaKnown RBP19.37■□□□□ 0.69
CAB39-201ENST00000258418 ARHGEF11O15085 1522 aa19.37■□□□□ 0.69
CAB39-201ENST00000258418 ARXQ96QS3 562 aa19.37■□□□□ 0.69
CAB39-201ENST00000258418 MYBBP1AQ9BQG0 1328 aaKnown RBP19.36■□□□□ 0.69
CAB39-201ENST00000258418 SLC24A1O60721 1099 aa19.36■□□□□ 0.69
CAB39-201ENST00000258418 KIAA0586Q9BVV6 1533 aa19.36■□□□□ 0.69
CAB39-201ENST00000258418 TRAK1Q9UPV9 953 aa19.36■□□□□ 0.69
CAB39-201ENST00000258418 IFT140Q96RY7 1462 aa19.35■□□□□ 0.69
CAB39-201ENST00000258418 MSH5O43196 834 aa19.35■□□□□ 0.69
CAB39-201ENST00000258418 PLEKHG5O94827 1062 aa19.34■□□□□ 0.69
CAB39-201ENST00000258418 MLECQ14165 292 aa19.34■□□□□ 0.69
CAB39-201ENST00000258418 C9orf84Q5VXU9 1444 aa19.34■□□□□ 0.69
CAB39-201ENST00000258418 SKAP1Q86WV1 359 aa19.34■□□□□ 0.69
CAB39-201ENST00000258418 KIAA1107Q9UPP5 1409 aa19.34■□□□□ 0.69
CAB39-201ENST00000258418 RRP7AQ9Y3A4 280 aaKnown RBP19.33■□□□□ 0.69
CAB39-201ENST00000258418 MAGI3Q5TCQ9 1506 aa19.32■□□□□ 0.68
CAB39-201ENST00000258418 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.31■□□□□ 0.68
CAB39-201ENST00000258418 PNISRQ8TF01 805 aaKnown RBP19.31■□□□□ 0.68
CAB39-201ENST00000258418 RTN4Q9NQC3 1192 aaKnown RBP19.31■□□□□ 0.68
CAB39-201ENST00000258418 NCOA1Q15788 1441 aa19.31■□□□□ 0.68
CAB39-201ENST00000258418 U2SURPO15042 1029 aaKnown RBP19.3■□□□□ 0.68
CAB39-201ENST00000258418 UGGT2Q9NYU1 1516 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms