RNA–Protein interactions for RNA: ENST00000256151.7

CCDC59-201, Transcript of coiled-coil domain containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC59, Length 1,983 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-201ENST00000256151 HECW1Q76N89 1606 aa22.5■■□□□ 1.19
CCDC59-201ENST00000256151 SHROOM2Q13796 1616 aa22.49■■□□□ 1.19
CCDC59-201ENST00000256151 FANCIQ9NVI1 1328 aa22.49■■□□□ 1.19
CCDC59-201ENST00000256151 ERCC6L2Q5T890 1561 aa22.47■■□□□ 1.19
CCDC59-201ENST00000256151 PLB1Q6P1J6 1458 aa22.47■■□□□ 1.19
CCDC59-201ENST00000256151 RAPGEF6Q8TEU7 1601 aa22.44■■□□□ 1.18
CCDC59-201ENST00000256151 EPRSP07814 1512 aaKnown RBP22.44■■□□□ 1.18
CCDC59-201ENST00000256151 CDK13Q14004 1512 aaKnown RBP22.44■■□□□ 1.18
CCDC59-201ENST00000256151 NUP153P49790 1475 aaKnown RBP22.42■■□□□ 1.18
CCDC59-201ENST00000256151 HNRNPUQ00839 825 aaKnown RBP eCLIP22.4■■□□□ 1.18
CCDC59-201ENST00000256151 CDK11AQ9UQ88 783 aaPredicted RBP22.4■■□□□ 1.18
CCDC59-201ENST00000256151 CNTLNQ9NXG0 1405 aa22.4■■□□□ 1.18
CCDC59-201ENST00000256151 WASHC2AQ641Q2 1341 aa22.39■■□□□ 1.18
CCDC59-201ENST00000256151 PTPRGP23470 1445 aa22.39■■□□□ 1.18
CCDC59-201ENST00000256151 HSPA5P11021 654 aaKnown RBP22.38■■□□□ 1.17
CCDC59-201ENST00000256151 OSCARQ8IYS5 282 aa22.38■■□□□ 1.17
CCDC59-201ENST00000256151 MAGI3Q5TCQ9 1506 aa22.37■■□□□ 1.17
CCDC59-201ENST00000256151 DENND4BO75064 1496 aaPredicted RBP22.37■■□□□ 1.17
CCDC59-201ENST00000256151 MIA2Q96PC5 1412 aa22.37■■□□□ 1.17
CCDC59-201ENST00000256151 EIF4G2P78344 907 aaKnown RBP eCLIP22.37■■□□□ 1.17
CCDC59-201ENST00000256151 PPP4R2Q9NY27 417 aa22.34■■□□□ 1.17
CCDC59-201ENST00000256151 BCL11AQ9H165 835 aa22.34■■□□□ 1.17
CCDC59-201ENST00000256151 NCOA1Q15788 1441 aa22.34■■□□□ 1.17
CCDC59-201ENST00000256151 ABCA8O94911 1581 aa22.34■■□□□ 1.17
CCDC59-201ENST00000256151 MSH5O43196 834 aa22.31■■□□□ 1.16
CCDC59-201ENST00000256151 POLR1AO95602 1720 aaPredicted RBP22.28■■□□□ 1.16
CCDC59-201ENST00000256151 CCDC7Q96M83 1385 aa22.27■■□□□ 1.16
CCDC59-201ENST00000256151 MYT1LQ9UL68 1186 aa22.26■■□□□ 1.15
CCDC59-201ENST00000256151 ZBED9Q6R2W3 1325 aa22.26■■□□□ 1.15
CCDC59-201ENST00000256151 ROCK1Q13464 1354 aa22.26■■□□□ 1.15
CCDC59-201ENST00000256151 MPHOSPH9Q99550 1183 aa22.25■■□□□ 1.15
CCDC59-201ENST00000256151 PRKRIP1Q9H875 184 aaPredicted RBP22.25■■□□□ 1.15
CCDC59-201ENST00000256151 ATP10BO94823 1461 aa22.23■■□□□ 1.15
CCDC59-201ENST00000256151 KDM6BO15054 1643 aa22.23■■□□□ 1.15
CCDC59-201ENST00000256151 RRP7BPQ9NSQ0 103 aa22.23■■□□□ 1.15
CCDC59-201ENST00000256151 RPRD2Q5VT52 1461 aaKnown RBP22.22■■□□□ 1.15
CCDC59-201ENST00000256151 L3MBTL2Q969R5 705 aa22.2■■□□□ 1.14
CCDC59-201ENST00000256151 ANKRD30BQ9BXX2 1392 aa22.2■■□□□ 1.14
CCDC59-201ENST00000256151 SPATA31E1Q6ZUB1 1445 aa22.19■■□□□ 1.14
CCDC59-201ENST00000256151 TEX14Q8IWB6 1497 aa22.18■■□□□ 1.14
CCDC59-201ENST00000256151 ABCC2Q92887 1545 aa22.17■■□□□ 1.14
CCDC59-201ENST00000256151 TROQ12816 1431 aaPredicted RBP22.15■■□□□ 1.14
CCDC59-201ENST00000256151 ERICH6Q7L0X2 663 aa22.15■■□□□ 1.14
CCDC59-201ENST00000256151 DNMT1P26358 1616 aaKnown RBP22.14■■□□□ 1.13
CCDC59-201ENST00000256151 PLEKHD1A6NEE1 506 aa22.13■■□□□ 1.13
CCDC59-201ENST00000256151 C11orf95C9JLR9 678 aaPredicted RBP22.13■■□□□ 1.13
CCDC59-201ENST00000256151 IRX6P78412 446 aaPredicted RBP22.13■■□□□ 1.13
CCDC59-201ENST00000256151 CHIC2Q9UKJ5 165 aa22.13■■□□□ 1.13
CCDC59-201ENST00000256151 CCDC184Q52MB2 194 aa22.12■■□□□ 1.13
CCDC59-201ENST00000256151 MRS2Q9HD23 443 aa22.12■■□□□ 1.13
CCDC59-201ENST00000256151 DAPK1P53355 1430 aa22.12■■□□□ 1.13
CCDC59-201ENST00000256151 KIF14Q15058 1648 aa22.11■■□□□ 1.13
CCDC59-201ENST00000256151 SMG6Q86US8 1419 aaKnown RBP22.1■■□□□ 1.13
CCDC59-201ENST00000256151 DNAJC5Q9H3Z4 198 aa22.08■■□□□ 1.12
CCDC59-201ENST00000256151 KIF7Q2M1P5 1343 aa22.08■■□□□ 1.12
CCDC59-201ENST00000256151 NBPF8Q3BBV2 869 aa22.07■■□□□ 1.12
CCDC59-201ENST00000256151 UHRF1BP1LA0JNW5 1464 aa22.07■■□□□ 1.12
CCDC59-201ENST00000256151 ARID4BQ4LE39 1312 aaPredicted RBP22.07■■□□□ 1.12
CCDC59-201ENST00000256151 ABCC5O15440 1437 aa22.06■■□□□ 1.12
CCDC59-201ENST00000256151 ADCY10Q96PN6 1610 aa22.05■■□□□ 1.12
CCDC59-201ENST00000256151 FAM9BQ8IZU0 186 aa22.05■■□□□ 1.12
CCDC59-201ENST00000256151 RNF123Q5XPI4 1314 aa22.05■■□□□ 1.12
CCDC59-201ENST00000256151 ZCCHC11Q5TAX3 1644 aaKnown RBP22.04■■□□□ 1.12
CCDC59-201ENST00000256151 MBD5Q9P267 1494 aa22.03■■□□□ 1.12
CCDC59-201ENST00000256151 DHX29Q7Z478 1369 aaKnown RBP21.99■■□□□ 1.11
CCDC59-201ENST00000256151 ZNF644Q9H582 1327 aaPredicted RBP21.98■■□□□ 1.11
CCDC59-201ENST00000256151 GPATCH8Q9UKJ3 1502 aaKnown RBP21.98■■□□□ 1.11
CCDC59-201ENST00000256151 ABCC10Q5T3U5 1492 aa21.98■■□□□ 1.11
CCDC59-201ENST00000256151 B4GALNT3Q6L9W6 998 aa21.98■■□□□ 1.11
CCDC59-201ENST00000256151 NUDCQ9Y266 331 aa21.97■■□□□ 1.11
CCDC59-201ENST00000256151 PZPP20742 1482 aa21.96■■□□□ 1.11
CCDC59-201ENST00000256151 ADGBQ8N7X0 1667 aa21.95■■□□□ 1.1
CCDC59-201ENST00000256151 FOXD1Q16676 465 aa21.95■■□□□ 1.1
CCDC59-201ENST00000256151 SLC4A1APQ9BWU0 796 aaKnown RBP21.95■■□□□ 1.1
CCDC59-201ENST00000256151 CFDP1Q9UEE9 299 aaPredicted RBP21.95■■□□□ 1.1
CCDC59-201ENST00000256151 ROCK2O75116 1388 aaKnown RBP21.95■■□□□ 1.1
CCDC59-201ENST00000256151 ZNF777Q9ULD5 760 aaPredicted RBP21.94■■□□□ 1.1
CCDC59-201ENST00000256151 ADGRL2O95490 1459 aa21.94■■□□□ 1.1
CCDC59-201ENST00000256151 ITSN2Q9NZM3 1697 aa21.93■■□□□ 1.1
CCDC59-201ENST00000256151 CDC42BPAQ5VT25 1732 aa21.92■■□□□ 1.1
CCDC59-201ENST00000256151 KIAA1107Q9UPP5 1409 aa21.91■■□□□ 1.1
CCDC59-201ENST00000256151 UHRF1BP1Q6BDS2 1440 aa21.91■■□□□ 1.1
CCDC59-201ENST00000256151 KDM5CP41229 1560 aa21.9■■□□□ 1.1
CCDC59-201ENST00000256151 NOP58Q9Y2X3 529 aaKnown RBP21.9■■□□□ 1.1
CCDC59-201ENST00000256151 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.9■■□□□ 1.1
CCDC59-201ENST00000256151 TTC37Q6PGP7 1564 aa21.9■■□□□ 1.1
CCDC59-201ENST00000256151 RIMBP3CA6NJZ7 1639 aa21.9■■□□□ 1.1
CCDC59-201ENST00000256151 RIMBP3BA6NNM3 1639 aa21.9■■□□□ 1.1
CCDC59-201ENST00000256151 RIMBP3Q9UFD9 1639 aa21.9■■□□□ 1.1
CCDC59-201ENST00000256151 BCORL1Q5H9F3 1711 aa21.89■■□□□ 1.1
CCDC59-201ENST00000256151 KTN1Q86UP2 1357 aaKnown RBP21.89■■□□□ 1.09
CCDC59-201ENST00000256151 CYB5RLQ6IPT4 315 aa21.88■■□□□ 1.09
CCDC59-201ENST00000256151 CAMSAP2Q08AD1 1489 aa21.88■■□□□ 1.09
CCDC59-201ENST00000256151 USP47Q96K76 1375 aa21.87■■□□□ 1.09
CCDC59-201ENST00000256151 CROCC2H7BZ55 1655 aa21.85■■□□□ 1.09
CCDC59-201ENST00000256151 NPM1P06748 294 aaKnown RBP eCLIP21.85■■□□□ 1.09
CCDC59-201ENST00000256151 RALGAPBQ86X10 1494 aa21.84■■□□□ 1.09
CCDC59-201ENST00000256151 WDR7Q9Y4E6 1490 aa21.84■■□□□ 1.09
CCDC59-201ENST00000256151 ASXL2Q76L83 1435 aa21.83■■□□□ 1.09
CCDC59-201ENST00000256151 ARHGEF12Q9NZN5 1544 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms