RNA–Protein interactions for RNA: ENST00000256001.12

ACTR3B-201, Transcript of ARP3 actin related protein 3 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTR3B, Length 2,216 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3B-201ENST00000256001 CFDP1Q9UEE9 299 aaPredicted RBP36.88■■■■□ 3.49
ACTR3B-201ENST00000256001 ADCY10Q96PN6 1610 aa36.87■■■■□ 3.49
ACTR3B-201ENST00000256001 ROCK1Q13464 1354 aa36.87■■■■□ 3.49
ACTR3B-201ENST00000256001 CHD1O14646 1710 aa36.86■■■■□ 3.49
ACTR3B-201ENST00000256001 GPATCH8Q9UKJ3 1502 aaKnown RBP36.85■■■■□ 3.49
ACTR3B-201ENST00000256001 ITSN2Q9NZM3 1697 aa36.85■■■■□ 3.49
ACTR3B-201ENST00000256001 PLEKHD1A6NEE1 506 aa36.83■■■■□ 3.49
ACTR3B-201ENST00000256001 ATP10BO94823 1461 aa36.83■■■■□ 3.49
ACTR3B-201ENST00000256001 CAMSAP2Q08AD1 1489 aa36.81■■■■□ 3.48
ACTR3B-201ENST00000256001 PTPRGP23470 1445 aa36.8■■■■□ 3.48
ACTR3B-201ENST00000256001 DENND4BO75064 1496 aaPredicted RBP36.77■■■■□ 3.48
ACTR3B-201ENST00000256001 ZNF777Q9ULD5 760 aaPredicted RBP36.77■■■■□ 3.48
ACTR3B-201ENST00000256001 MPHOSPH9Q99550 1183 aa36.75■■■■□ 3.47
ACTR3B-201ENST00000256001 ABCC10Q5T3U5 1492 aa36.65■■■■□ 3.46
ACTR3B-201ENST00000256001 SHROOM2Q13796 1616 aa36.63■■■■□ 3.45
ACTR3B-201ENST00000256001 CDC42BPAQ5VT25 1732 aa36.62■■■■□ 3.45
ACTR3B-201ENST00000256001 HIRIP3Q9BW71 556 aaPredicted RBP36.61■■■■□ 3.45
ACTR3B-201ENST00000256001 NCOA1Q15788 1441 aa36.6■■■■□ 3.45
ACTR3B-201ENST00000256001 FOXD1Q16676 465 aa36.59■■■■□ 3.45
ACTR3B-201ENST00000256001 KDM5BQ9UGL1 1544 aa36.59■■■■□ 3.45
ACTR3B-201ENST00000256001 ADGBQ8N7X0 1667 aa36.58■■■■□ 3.45
ACTR3B-201ENST00000256001 CROCC2H7BZ55 1655 aa36.56■■■■□ 3.44
ACTR3B-201ENST00000256001 GTF3C3Q9Y5Q9 886 aa36.55■■■■□ 3.44
ACTR3B-201ENST00000256001 DDX10Q13206 875 aaKnown RBP36.55■■■■□ 3.44
ACTR3B-201ENST00000256001 ADGRL2O95490 1459 aa36.54■■■■□ 3.44
ACTR3B-201ENST00000256001 SLC4A1APQ9BWU0 796 aaKnown RBP36.52■■■■□ 3.44
ACTR3B-201ENST00000256001 ANKRD30AQ9BXX3 1397 aa36.5■■■■□ 3.43
ACTR3B-201ENST00000256001 ERCC6L2Q5T890 1561 aa36.49■■■■□ 3.43
ACTR3B-201ENST00000256001 ANKRD30BQ9BXX2 1392 aa36.47■■■■□ 3.43
ACTR3B-201ENST00000256001 C9orf84Q5VXU9 1444 aa36.4■■■■□ 3.42
ACTR3B-201ENST00000256001 PZPP20742 1482 aa36.4■■■■□ 3.42
ACTR3B-201ENST00000256001 SHANK2Q9UPX8 1470 aa36.4■■■■□ 3.42
ACTR3B-201ENST00000256001 L3MBTL2Q969R5 705 aa36.4■■■■□ 3.42
ACTR3B-201ENST00000256001 TSPY4P0CV99 314 aa36.38■■■■□ 3.41
ACTR3B-201ENST00000256001 TSPY10P0CW01 314 aa36.38■■■■□ 3.41
ACTR3B-201ENST00000256001 RPRD2Q5VT52 1461 aaKnown RBP36.38■■■■□ 3.41
ACTR3B-201ENST00000256001 HNRNPMP52272 730 aaKnown RBP eCLIP36.38■■■■□ 3.41
ACTR3B-201ENST00000256001 ABCC2Q92887 1545 aa36.37■■■■□ 3.41
ACTR3B-201ENST00000256001 ANKRD50Q9ULJ7 1429 aa36.37■■■■□ 3.41
ACTR3B-201ENST00000256001 CLASP1Q7Z460 1538 aa36.35■■■■□ 3.41
ACTR3B-201ENST00000256001 PREX2Q70Z35 1606 aa36.32■■■■□ 3.41
ACTR3B-201ENST00000256001 CDC42BPBQ9Y5S2 1711 aa36.32■■■■□ 3.4
ACTR3B-201ENST00000256001 ARHGEF5Q12774 1597 aa36.3■■■■□ 3.4
ACTR3B-201ENST00000256001 MBD5Q9P267 1494 aa36.3■■■■□ 3.4
ACTR3B-201ENST00000256001 SAMD9LQ8IVG5 1584 aa36.29■■■■□ 3.4
ACTR3B-201ENST00000256001 TTC37Q6PGP7 1564 aa36.25■■■■□ 3.39
ACTR3B-201ENST00000256001 KIAA1107Q9UPP5 1409 aa36.24■■■■□ 3.39
ACTR3B-201ENST00000256001 TEX14Q8IWB6 1497 aa36.24■■■■□ 3.39
ACTR3B-201ENST00000256001 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.24■■■■□ 3.39
ACTR3B-201ENST00000256001 PKD2Q13563 968 aa36.23■■■■□ 3.39
ACTR3B-201ENST00000256001 CCDC141Q6ZP82 1450 aa36.23■■■■□ 3.39
ACTR3B-201ENST00000256001 KCNH8Q96L42 1107 aa36.23■■■■□ 3.39
ACTR3B-201ENST00000256001 HSPA5P11021 654 aaKnown RBP36.22■■■■□ 3.39
ACTR3B-201ENST00000256001 KIF15Q9NS87 1388 aa36.22■■■■□ 3.39
ACTR3B-201ENST00000256001 ARHGAP5Q13017 1502 aa36.2■■■■□ 3.39
ACTR3B-201ENST00000256001 RSPH4AQ5TD94 716 aa36.2■■■■□ 3.39
ACTR3B-201ENST00000256001 NUP155O75694 1391 aa36.19■■■■□ 3.38
ACTR3B-201ENST00000256001 EIF4G2P78344 907 aaKnown RBP eCLIP36.19■■■■□ 3.38
ACTR3B-201ENST00000256001 NBPF8Q3BBV2 869 aa36.15■■■■□ 3.38
ACTR3B-201ENST00000256001 ANP32CO43423 234 aa36.15■■■■□ 3.38
ACTR3B-201ENST00000256001 UHRF1BP1LA0JNW5 1464 aa36.13■■■■□ 3.38
ACTR3B-201ENST00000256001 SYCP2Q9BX26 1530 aa36.13■■■■□ 3.37
ACTR3B-201ENST00000256001 ZCCHC11Q5TAX3 1644 aaKnown RBP36.13■■■■□ 3.37
ACTR3B-201ENST00000256001 MYO5CQ9NQX4 1742 aa36.11■■■■□ 3.37
ACTR3B-201ENST00000256001 KDM5DQ9BY66 1539 aa36.08■■■■□ 3.37
ACTR3B-201ENST00000256001 WASHC2AQ641Q2 1341 aa36.05■■■■□ 3.36
ACTR3B-201ENST00000256001 PLEKHH2Q8IVE3 1493 aa36.03■■■■□ 3.36
ACTR3B-201ENST00000256001 CCER2I3L3R5 266 aa36.02■■■■□ 3.36
ACTR3B-201ENST00000256001 MAST1Q9Y2H9 1570 aa36■■■■□ 3.35
ACTR3B-201ENST00000256001 PLCH2O75038 1416 aa35.99■■■■□ 3.35
ACTR3B-201ENST00000256001 EFCAB2Q5VUJ9 269 aa35.94■■■■□ 3.34
ACTR3B-201ENST00000256001 ARHGEF12Q9NZN5 1544 aa35.93■■■■□ 3.34
ACTR3B-201ENST00000256001 FAM135AQ9P2D6 1515 aa35.9■■■■□ 3.34
ACTR3B-201ENST00000256001 ZNF326Q5BKZ1 582 aaKnown RBP35.89■■■■□ 3.34
ACTR3B-201ENST00000256001 C11orf95C9JLR9 678 aaPredicted RBP35.89■■■■□ 3.34
ACTR3B-201ENST00000256001 SPATA31E1Q6ZUB1 1445 aa35.88■■■■□ 3.34
ACTR3B-201ENST00000256001 PLXNC1O60486 1568 aa35.87■■■■□ 3.33
ACTR3B-201ENST00000256001 CCDC7Q96M83 1385 aa35.86■■■■□ 3.33
ACTR3B-201ENST00000256001 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.81■■■■□ 3.32
ACTR3B-201ENST00000256001 ABCC1P33527 1531 aa35.81■■■■□ 3.32
ACTR3B-201ENST00000256001 UNC13BO14795 1591 aa35.81■■■■□ 3.32
ACTR3B-201ENST00000256001 CNTLNQ9NXG0 1405 aa35.8■■■■□ 3.32
ACTR3B-201ENST00000256001 DUOX2Q9NRD8 1548 aa35.78■■■■□ 3.32
ACTR3B-201ENST00000256001 WDR7Q9Y4E6 1490 aa35.76■■■■□ 3.32
ACTR3B-201ENST00000256001 UHRF1BP1Q6BDS2 1440 aa35.76■■■■□ 3.32
ACTR3B-201ENST00000256001 TRAPPC8Q9Y2L5 1435 aa35.76■■■■□ 3.32
ACTR3B-201ENST00000256001 KIF7Q2M1P5 1343 aa35.73■■■■□ 3.31
ACTR3B-201ENST00000256001 USP47Q96K76 1375 aa35.73■■■■□ 3.31
ACTR3B-201ENST00000256001 ARAP3Q8WWN8 1544 aa35.72■■■■□ 3.31
ACTR3B-201ENST00000256001 ERBINQ96RT1 1412 aa35.72■■■■□ 3.31
ACTR3B-201ENST00000256001 KDM2AQ9Y2K7 1162 aa35.71■■■■□ 3.31
ACTR3B-201ENST00000256001 DCAF11Q8TEB1 546 aa35.69■■■■□ 3.3
ACTR3B-201ENST00000256001 IQGAP3Q86VI3 1631 aa35.68■■■■□ 3.3
ACTR3B-201ENST00000256001 CCDC144AA2RUR9 1427 aa35.68■■■■□ 3.3
ACTR3B-201ENST00000256001 POLR1AO95602 1720 aaPredicted RBP35.68■■■■□ 3.3
ACTR3B-201ENST00000256001 RALGAPBQ86X10 1494 aa35.67■■■■□ 3.3
ACTR3B-201ENST00000256001 SPAG9O60271 1321 aaKnown RBP35.66■■■■□ 3.3
ACTR3B-201ENST00000256001 OSCARQ8IYS5 282 aa35.65■■■■□ 3.3
ACTR3B-201ENST00000256001 AFAP1Q8N556 730 aa35.65■■■■□ 3.3
ACTR3B-201ENST00000256001 KDM5CP41229 1560 aa35.63■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms