RNA–Protein interactions for RNA: ENST00000254271.8

LRRC9-201, Transcript of leucine rich repeat containing 9, humanhuman

TSL 2

Gene LRRC9, Length 4,915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC9-201ENST00000254271 VWDEQ8N2E2 1590 aa4.68□□□□□ -1.66
LRRC9-201ENST00000254271 ABCC1P33527 1531 aa4.68□□□□□ -1.66
LRRC9-201ENST00000254271 MYO3AQ8NEV4 1616 aa4.67□□□□□ -1.66
LRRC9-201ENST00000254271 RAPGEF2Q9Y4G8 1499 aa4.67□□□□□ -1.66
LRRC9-201ENST00000254271 FHOD3Q2V2M9 1422 aa4.66□□□□□ -1.66
LRRC9-201ENST00000254271 PIK3C2BO00750 1634 aa4.66□□□□□ -1.66
LRRC9-201ENST00000254271 AGLP35573 1532 aa4.66□□□□□ -1.66
LRRC9-201ENST00000254271 ZNF518AQ6AHZ1 1483 aa4.65□□□□□ -1.66
LRRC9-201ENST00000254271 UACAQ9BZF9 1416 aa4.65□□□□□ -1.67
LRRC9-201ENST00000254271 NRXN3Q9Y4C0 1643 aa4.64□□□□□ -1.67
LRRC9-201ENST00000254271 UBR1Q8IWV7 1749 aa4.64□□□□□ -1.67
LRRC9-201ENST00000254271 CRYBG1Q9Y4K1 1723 aa4.64□□□□□ -1.67
LRRC9-201ENST00000254271 SETD1BQ9UPS6 1966 aaKnown RBP4.64□□□□□ -1.67
LRRC9-201ENST00000254271 ARHGAP35Q9NRY4 1499 aa4.63□□□□□ -1.67
LRRC9-201ENST00000254271 SUPT6HQ7KZ85 1726 aaKnown RBP4.63□□□□□ -1.67
LRRC9-201ENST00000254271 TIAM1Q13009 1591 aa4.63□□□□□ -1.67
LRRC9-201ENST00000254271 CYB5RLQ6IPT4 315 aa4.63□□□□□ -1.67
LRRC9-201ENST00000254271 PTPRMP28827 1452 aa4.63□□□□□ -1.67
LRRC9-201ENST00000254271 ZFYVE16Q7Z3T8 1539 aa4.62□□□□□ -1.67
LRRC9-201ENST00000254271 TET3O43151 1660 aa4.62□□□□□ -1.67
LRRC9-201ENST00000254271 CFAP74Q9C0B2 1584 aa4.61□□□□□ -1.67
LRRC9-201ENST00000254271 MBD5Q9P267 1494 aa4.61□□□□□ -1.67
LRRC9-201ENST00000254271 NEO1Q92859 1461 aa4.61□□□□□ -1.67
LRRC9-201ENST00000254271 IFT172Q9UG01 1749 aa4.61□□□□□ -1.67
LRRC9-201ENST00000254271 DNMT1P26358 1616 aaKnown RBP4.61□□□□□ -1.67
LRRC9-201ENST00000254271 TCOF1Q13428 1488 aaKnown RBP4.61□□□□□ -1.67
LRRC9-201ENST00000254271 MAST1Q9Y2H9 1570 aa4.6□□□□□ -1.67
LRRC9-201ENST00000254271 CEP152O94986 1710 aa4.6□□□□□ -1.67
LRRC9-201ENST00000254271 TRIM41Q8WV44 630 aa4.6□□□□□ -1.67
LRRC9-201ENST00000254271 EFCAB5A4FU69 1503 aa4.6□□□□□ -1.67
LRRC9-201ENST00000254271 CDK13Q14004 1512 aaKnown RBP4.6□□□□□ -1.67
LRRC9-201ENST00000254271 JPH4Q96JJ6 628 aa4.59□□□□□ -1.67
LRRC9-201ENST00000254271 CLTCQ00610 1675 aaKnown RBP4.59□□□□□ -1.67
LRRC9-201ENST00000254271 CHD2O14647 1828 aaKnown RBP4.59□□□□□ -1.67
LRRC9-201ENST00000254271 YEATS2Q9ULM3 1422 aa4.59□□□□□ -1.68
LRRC9-201ENST00000254271 TNIKQ9UKE5 1360 aa4.58□□□□□ -1.68
LRRC9-201ENST00000254271 CENPFP49454 3210 aa4.58□□□□□ -1.68
LRRC9-201ENST00000254271 MARF1Q9Y4F3 1742 aaKnown RBP4.58□□□□□ -1.68
LRRC9-201ENST00000254271 MAGI2Q86UL8 1455 aa4.58□□□□□ -1.68
LRRC9-201ENST00000254271 DIP2AQ14689 1571 aa4.58□□□□□ -1.68
LRRC9-201ENST00000254271 NWD1Q149M9 1564 aa4.57□□□□□ -1.68
LRRC9-201ENST00000254271 CARMIL1Q5VZK9 1371 aa4.57□□□□□ -1.68
LRRC9-201ENST00000254271 KDM5DQ9BY66 1539 aa4.56□□□□□ -1.68
LRRC9-201ENST00000254271 KIF27Q86VH2 1401 aa4.56□□□□□ -1.68
LRRC9-201ENST00000254271 MLH3Q9UHC1 1453 aa4.56□□□□□ -1.68
LRRC9-201ENST00000254271 TNRC18O15417 2968 aaPredicted RBP4.56□□□□□ -1.68
LRRC9-201ENST00000254271 COL24A1Q17RW2 1714 aa4.56□□□□□ -1.68
LRRC9-201ENST00000254271 EIF2AK4Q9P2K8 1649 aaKnown RBP4.56□□□□□ -1.68
LRRC9-201ENST00000254271 MUC3AQ02505 3323 aa4.56□□□□□ -1.68
LRRC9-201ENST00000254271 POGZQ7Z3K3 1410 aa4.56□□□□□ -1.68
LRRC9-201ENST00000254271 SYNMO15061 1565 aa4.56□□□□□ -1.68
LRRC9-201ENST00000254271 MAP3K1Q13233 1512 aa4.55□□□□□ -1.68
LRRC9-201ENST00000254271 UNC13BO14795 1591 aa4.55□□□□□ -1.68
LRRC9-201ENST00000254271 SPATA31D1Q6ZQQ2 1576 aa4.55□□□□□ -1.68
LRRC9-201ENST00000254271 MKI67P46013 3256 aaKnown RBP4.55□□□□□ -1.68
LRRC9-201ENST00000254271 EYSQ5T1H1 3165 aa4.55□□□□□ -1.68
LRRC9-201ENST00000254271 UGGT1Q9NYU2 1555 aa4.54□□□□□ -1.68
LRRC9-201ENST00000254271 ABCA3Q99758 1704 aa4.54□□□□□ -1.68
LRRC9-201ENST00000254271 CAMSAP1Q5T5Y3 1602 aa4.54□□□□□ -1.68
LRRC9-201ENST00000254271 PRDM15P57071 1507 aaPredicted RBP4.53□□□□□ -1.68
LRRC9-201ENST00000254271 EFCAB6Q5THR3 1501 aa4.53□□□□□ -1.68
LRRC9-201ENST00000254271 IQSEC2Q5JU85 1478 aa4.53□□□□□ -1.68
LRRC9-201ENST00000254271 MED14O60244 1454 aa4.52□□□□□ -1.69
LRRC9-201ENST00000254271 XRN1Q8IZH2 1706 aaKnown RBP4.52□□□□□ -1.69
LRRC9-201ENST00000254271 ARHGEF5Q12774 1597 aa4.52□□□□□ -1.69
LRRC9-201ENST00000254271 HTTP42858 3142 aa4.52□□□□□ -1.69
LRRC9-201ENST00000254271 LAMA2P24043 3122 aaKnown RBP4.52□□□□□ -1.69
LRRC9-201ENST00000254271 QRICH2Q9H0J4 1663 aa4.52□□□□□ -1.69
LRRC9-201ENST00000254271 DENND4BO75064 1496 aaPredicted RBP4.51□□□□□ -1.69
LRRC9-201ENST00000254271 FAM135AQ9P2D6 1515 aa4.51□□□□□ -1.69
LRRC9-201ENST00000254271 NCOA2Q15596 1464 aa4.5□□□□□ -1.69
LRRC9-201ENST00000254271 NHSL1Q5SYE7 1610 aa4.5□□□□□ -1.69
LRRC9-201ENST00000254271 PLCH2O75038 1416 aa4.5□□□□□ -1.69
LRRC9-201ENST00000254271 TMEM131LA2VDJ0 1609 aa4.5□□□□□ -1.69
LRRC9-201ENST00000254271 ARHGAP23Q9P227 1491 aa4.5□□□□□ -1.69
LRRC9-201ENST00000254271 TEX14Q8IWB6 1497 aa4.5□□□□□ -1.69
LRRC9-201ENST00000254271 PTPRGP23470 1445 aa4.49□□□□□ -1.69
LRRC9-201ENST00000254271 IQGAP3Q86VI3 1631 aa4.49□□□□□ -1.69
LRRC9-201ENST00000254271 GPATCH8Q9UKJ3 1502 aaKnown RBP4.49□□□□□ -1.69
LRRC9-201ENST00000254271 E9PCH4 1651 aa4.49□□□□□ -1.69
LRRC9-201ENST00000254271 IQGAP1P46940 1657 aa4.49□□□□□ -1.69
LRRC9-201ENST00000254271 NCOA1Q15788 1441 aa4.48□□□□□ -1.69
LRRC9-201ENST00000254271 COL16A1Q07092 1604 aaPredicted RBP4.48□□□□□ -1.69
LRRC9-201ENST00000254271 REV3LO60673 3130 aa4.48□□□□□ -1.69
LRRC9-201ENST00000254271 SLIT1O75093 1534 aa4.48□□□□□ -1.69
LRRC9-201ENST00000254271 TRAPPC8Q9Y2L5 1435 aa4.48□□□□□ -1.69
LRRC9-201ENST00000254271 GCC2Q8IWJ2 1684 aa4.47□□□□□ -1.69
LRRC9-201ENST00000254271 NALCNQ8IZF0 1738 aa4.47□□□□□ -1.69
LRRC9-201ENST00000254271 PRAG1Q86YV5 1406 aa4.47□□□□□ -1.69
LRRC9-201ENST00000254271 LMTK2Q8IWU2 1503 aa4.47□□□□□ -1.69
LRRC9-201ENST00000254271 ILDR1Q86SU0 546 aaPredicted RBP4.47□□□□□ -1.69
LRRC9-201ENST00000254271 CD109Q6YHK3 1445 aa4.47□□□□□ -1.69
LRRC9-201ENST00000254271 SHPRHQ149N8 1683 aa4.46□□□□□ -1.69
LRRC9-201ENST00000254271 SYCP2Q9BX26 1530 aa4.46□□□□□ -1.69
LRRC9-201ENST00000254271 PLA2R1Q13018 1463 aa4.46□□□□□ -1.7
LRRC9-201ENST00000254271 SPTBN5Q9NRC6 3674 aaKnown RBP4.46□□□□□ -1.7
LRRC9-201ENST00000254271 PTPRKQ15262 1439 aa4.46□□□□□ -1.7
LRRC9-201ENST00000254271 PRUNE2Q8WUY3 3088 aa4.45□□□□□ -1.7
LRRC9-201ENST00000254271 COL22A1Q8NFW1 1626 aaPredicted RBP4.45□□□□□ -1.7
LRRC9-201ENST00000254271 FANCAO15360 1455 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms