RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 MAP3K1Q13233 1512 aa21.39■■□□□ 1.01
SLC6A8-201ENST00000253122 ERICH6BQ5W0A0 696 aa21.38■■□□□ 1.01
SLC6A8-201ENST00000253122 CARMIL2Q6F5E8 1435 aa21.35■■□□□ 1.01
SLC6A8-201ENST00000253122 JPH4Q96JJ6 628 aa21.35■■□□□ 1.01
SLC6A8-201ENST00000253122 SAMD9Q5K651 1589 aa21.34■■□□□ 1.01
SLC6A8-201ENST00000253122 FOXD1Q16676 465 aa21.34■■□□□ 1.01
SLC6A8-201ENST00000253122 NEFMP07197 916 aa21.33■■□□□ 1
SLC6A8-201ENST00000253122 PHLDB1Q86UU1 1377 aa21.32■■□□□ 1
SLC6A8-201ENST00000253122 PAK3O75914 559 aaPredicted RBP21.3■■□□□ 1
SLC6A8-201ENST00000253122 UGGT2Q9NYU1 1516 aa21.28■■□□□ 1
SLC6A8-201ENST00000253122 CCDC184Q52MB2 194 aa21.27■■□□□ 1
SLC6A8-201ENST00000253122 IPO9Q96P70 1041 aaKnown RBP21.27■■□□□ 1
SLC6A8-201ENST00000253122 CCDC18Q5T9S5 1454 aa21.25■□□□□ 0.99
SLC6A8-201ENST00000253122 CFAP43Q8NDM7 1665 aa21.25■□□□□ 0.99
SLC6A8-201ENST00000253122 SLC4A1APQ9BWU0 796 aaKnown RBP21.24■□□□□ 0.99
SLC6A8-201ENST00000253122 PRKRIP1Q9H875 184 aaPredicted RBP21.24■□□□□ 0.99
SLC6A8-201ENST00000253122 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.24■□□□□ 0.99
SLC6A8-201ENST00000253122 HECW1Q76N89 1606 aa21.23■□□□□ 0.99
SLC6A8-201ENST00000253122 L3MBTL2Q969R5 705 aa21.21■□□□□ 0.99
SLC6A8-201ENST00000253122 ARXQ96QS3 562 aa21.21■□□□□ 0.99
SLC6A8-201ENST00000253122 WASHC2AQ641Q2 1341 aa21.21■□□□□ 0.99
SLC6A8-201ENST00000253122 ZNF777Q9ULD5 760 aaPredicted RBP21.2■□□□□ 0.98
SLC6A8-201ENST00000253122 NUP160Q12769 1436 aa21.2■□□□□ 0.98
SLC6A8-201ENST00000253122 CEP170Q5SW79 1584 aa21.19■□□□□ 0.98
SLC6A8-201ENST00000253122 KIAA0556O60303 1618 aa21.18■□□□□ 0.98
SLC6A8-201ENST00000253122 ANO8Q9HCE9 1232 aaPredicted RBP21.18■□□□□ 0.98
SLC6A8-201ENST00000253122 KDM2AQ9Y2K7 1162 aa21.18■□□□□ 0.98
SLC6A8-201ENST00000253122 EHBP1L1Q8N3D4 1523 aa21.16■□□□□ 0.98
SLC6A8-201ENST00000253122 ZBED9Q6R2W3 1325 aa21.15■□□□□ 0.98
SLC6A8-201ENST00000253122 EPRSP07814 1512 aaKnown RBP21.15■□□□□ 0.98
SLC6A8-201ENST00000253122 DISP1Q96F81 1524 aa21.15■□□□□ 0.98
SLC6A8-201ENST00000253122 NCOA2Q15596 1464 aa21.13■□□□□ 0.97
SLC6A8-201ENST00000253122 NUDCQ9Y266 331 aa21.13■□□□□ 0.97
SLC6A8-201ENST00000253122 MAPKBP1O60336 1514 aa21.12■□□□□ 0.97
SLC6A8-201ENST00000253122 FGD6Q6ZV73 1430 aa21.12■□□□□ 0.97
SLC6A8-201ENST00000253122 CDK13Q14004 1512 aaKnown RBP21.12■□□□□ 0.97
SLC6A8-201ENST00000253122 PRG4Q92954 1404 aaPredicted RBP21.11■□□□□ 0.97
SLC6A8-201ENST00000253122 MPHOSPH9Q99550 1183 aa21.11■□□□□ 0.97
SLC6A8-201ENST00000253122 PPM1GO15355 546 aaPredicted RBP21.1■□□□□ 0.97
SLC6A8-201ENST00000253122 PLEKHD1A6NEE1 506 aa21.1■□□□□ 0.97
SLC6A8-201ENST00000253122 MYOM3Q5VTT5 1437 aa21.09■□□□□ 0.97
SLC6A8-201ENST00000253122 PTPRGP23470 1445 aa21.09■□□□□ 0.97
SLC6A8-201ENST00000253122 SUPT6HQ7KZ85 1726 aaKnown RBP21.09■□□□□ 0.97
SLC6A8-201ENST00000253122 IL27Q8NEV9 243 aa21.08■□□□□ 0.96
SLC6A8-201ENST00000253122 PRKCSHP14314 528 aaPredicted RBP21.08■□□□□ 0.96
SLC6A8-201ENST00000253122 PLB1Q6P1J6 1458 aa21.05■□□□□ 0.96
SLC6A8-201ENST00000253122 RAPGEF6Q8TEU7 1601 aa21.05■□□□□ 0.96
SLC6A8-201ENST00000253122 NUP153P49790 1475 aaKnown RBP21.01■□□□□ 0.95
SLC6A8-201ENST00000253122 DDRGK1Q96HY6 314 aa21.01■□□□□ 0.95
SLC6A8-201ENST00000253122 CHD1O14646 1710 aa21■□□□□ 0.95
SLC6A8-201ENST00000253122 AKNAQ7Z591 1439 aa21■□□□□ 0.95
SLC6A8-201ENST00000253122 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21■□□□□ 0.954e-29■■□□□ 13.6
SLC6A8-201ENST00000253122 CARD11Q9BXL7 1154 aa20.99■□□□□ 0.95
SLC6A8-201ENST00000253122 EXOC6Q8TAG9 804 aa20.99■□□□□ 0.95
SLC6A8-201ENST00000253122 CFDP1Q9UEE9 299 aaPredicted RBP20.98■□□□□ 0.95
SLC6A8-201ENST00000253122 RCAN3Q9UKA8 241 aa20.98■□□□□ 0.95
SLC6A8-201ENST00000253122 UACAQ9BZF9 1416 aa20.98■□□□□ 0.95
SLC6A8-201ENST00000253122 TCERG1O14776 1098 aaKnown RBP20.97■□□□□ 0.95
SLC6A8-201ENST00000253122 PDE4AP27815 886 aa20.97■□□□□ 0.95
SLC6A8-201ENST00000253122 CCDC7Q96M83 1385 aa20.97■□□□□ 0.95
SLC6A8-201ENST00000253122 C11orf95C9JLR9 678 aaPredicted RBP20.97■□□□□ 0.95
SLC6A8-201ENST00000253122 CNTLNQ9NXG0 1405 aa20.96■□□□□ 0.95
SLC6A8-201ENST00000253122 SLC4A3P48751 1232 aa20.96■□□□□ 0.95
SLC6A8-201ENST00000253122 TROQ12816 1431 aaPredicted RBP20.95■□□□□ 0.94
SLC6A8-201ENST00000253122 KIF7Q2M1P5 1343 aa20.95■□□□□ 0.94
SLC6A8-201ENST00000253122 RGS3P49796 1198 aa20.94■□□□□ 0.94
SLC6A8-201ENST00000253122 MAGI3Q5TCQ9 1506 aa20.93■□□□□ 0.94
SLC6A8-201ENST00000253122 LRRIQ1Q96JM4 1722 aa20.93■□□□□ 0.94
SLC6A8-201ENST00000253122 CANXP27824 592 aaKnown RBP20.91■□□□□ 0.94
SLC6A8-201ENST00000253122 MIA2Q96PC5 1412 aa20.9■□□□□ 0.94
SLC6A8-201ENST00000253122 PLIN1O60240 522 aa20.9■□□□□ 0.94
SLC6A8-201ENST00000253122 PTPN23Q9H3S7 1636 aa20.89■□□□□ 0.93
SLC6A8-201ENST00000253122 CC2D1BQ5T0F9 858 aaKnown RBP20.87■□□□□ 0.93
SLC6A8-201ENST00000253122 RGL3Q3MIN7 710 aa20.87■□□□□ 0.93
SLC6A8-201ENST00000253122 NBPF8Q3BBV2 869 aa20.86■□□□□ 0.93
SLC6A8-201ENST00000253122 RRP1P56182 461 aaKnown RBP20.86■□□□□ 0.93
SLC6A8-201ENST00000253122 USP35Q9P2H5 1018 aa20.83■□□□□ 0.93
SLC6A8-201ENST00000253122 OSCARQ8IYS5 282 aa20.83■□□□□ 0.92
SLC6A8-201ENST00000253122 ATP10BO94823 1461 aa20.82■□□□□ 0.92
SLC6A8-201ENST00000253122 BRPF3Q9ULD4 1205 aa20.81■□□□□ 0.92
SLC6A8-201ENST00000253122 ZNF644Q9H582 1327 aaPredicted RBP20.81■□□□□ 0.92
SLC6A8-201ENST00000253122 ABCA8O94911 1581 aa20.81■□□□□ 0.92
SLC6A8-201ENST00000253122 WDR43Q15061 677 aaKnown RBP eCLIP20.81■□□□□ 0.924e-9■■■□□ 15.5
SLC6A8-201ENST00000253122 PKD2Q13563 968 aa20.81■□□□□ 0.92
SLC6A8-201ENST00000253122 ARHGEF11O15085 1522 aa20.8■□□□□ 0.92
SLC6A8-201ENST00000253122 DCAF11Q8TEB1 546 aa20.8■□□□□ 0.92
SLC6A8-201ENST00000253122 GSE1Q14687 1217 aa20.79■□□□□ 0.92
SLC6A8-201ENST00000253122 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.79■□□□□ 0.92
SLC6A8-201ENST00000253122 HFM1A2PYH4 1435 aa20.78■□□□□ 0.92
SLC6A8-201ENST00000253122 TSPY4P0CV99 314 aa20.78■□□□□ 0.92
SLC6A8-201ENST00000253122 TSPY10P0CW01 314 aa20.78■□□□□ 0.92
SLC6A8-201ENST00000253122 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.77■□□□□ 0.922e-10■□□□□ 9.2
SLC6A8-201ENST00000253122 TCOF1Q13428 1488 aaKnown RBP20.77■□□□□ 0.91
SLC6A8-201ENST00000253122 KIF14Q15058 1648 aa20.76■□□□□ 0.91
SLC6A8-201ENST00000253122 PTPRKQ15262 1439 aa20.75■□□□□ 0.91
SLC6A8-201ENST00000253122 NPM1P06748 294 aaKnown RBP eCLIP20.75■□□□□ 0.91
SLC6A8-201ENST00000253122 SKAP1Q86WV1 359 aa20.75■□□□□ 0.91
SLC6A8-201ENST00000253122 NAIPQ13075 1403 aa20.75■□□□□ 0.91
SLC6A8-201ENST00000253122 ST20-MTHFSA0A0A6YYL1 179 aa20.74■□□□□ 0.91
SLC6A8-201ENST00000253122 CRBNQ96SW2 442 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms