RNA–Protein interactions for RNA: ENST00000250113.11

FXR2-201, Transcript of FMR1 autosomal homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXR2, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR2-201ENST00000250113 TROQ12816 1431 aaPredicted RBP27.89■■■□□ 2.06
FXR2-201ENST00000250113 DAPK1P53355 1430 aa27.87■■■□□ 2.05
FXR2-201ENST00000250113 ABCC5O15440 1437 aa27.86■■■□□ 2.05
FXR2-201ENST00000250113 MPHOSPH9Q99550 1183 aa27.86■■■□□ 2.05
FXR2-201ENST00000250113 PLEKHD1A6NEE1 506 aa27.86■■■□□ 2.05
FXR2-201ENST00000250113 KIF14Q15058 1648 aa27.82■■■□□ 2.04
FXR2-201ENST00000250113 DENND4BO75064 1496 aaPredicted RBP27.8■■■□□ 2.04
FXR2-201ENST00000250113 GPATCH8Q9UKJ3 1502 aaKnown RBP27.78■■■□□ 2.04
FXR2-201ENST00000250113 GCC2Q8IWJ2 1684 aa27.77■■■□□ 2.04
FXR2-201ENST00000250113 PTPRGP23470 1445 aa27.77■■■□□ 2.04
FXR2-201ENST00000250113 ATP10BO94823 1461 aa27.77■■■□□ 2.04
FXR2-201ENST00000250113 AKNAQ7Z591 1439 aa27.75■■■□□ 2.03
FXR2-201ENST00000250113 CAMSAP2Q08AD1 1489 aa27.74■■■□□ 2.03
FXR2-201ENST00000250113 DNMT1P26358 1616 aaKnown RBP27.72■■■□□ 2.03
FXR2-201ENST00000250113 SLC4A1APQ9BWU0 796 aaKnown RBP27.72■■■□□ 2.03
FXR2-201ENST00000250113 ABCA8O94911 1581 aa27.71■■■□□ 2.03
FXR2-201ENST00000250113 ROCK1Q13464 1354 aa27.7■■■□□ 2.03
FXR2-201ENST00000250113 CHD1O14646 1710 aa27.67■■■□□ 2.02
FXR2-201ENST00000250113 L3MBTL2Q969R5 705 aa27.66■■■□□ 2.02
FXR2-201ENST00000250113 HNRNPMP52272 730 aaKnown RBP eCLIP27.63■■■□□ 2.01
FXR2-201ENST00000250113 NCOA1Q15788 1441 aa27.62■■■□□ 2.01
FXR2-201ENST00000250113 KDM5BQ9UGL1 1544 aa27.61■■■□□ 2.01
FXR2-201ENST00000250113 ITSN2Q9NZM3 1697 aa27.59■■■□□ 2.01
FXR2-201ENST00000250113 ADCY10Q96PN6 1610 aa27.58■■■□□ 2.01
FXR2-201ENST00000250113 ERCC6L2Q5T890 1561 aa27.57■■■□□ 2
FXR2-201ENST00000250113 ABCC10Q5T3U5 1492 aa27.56■■■□□ 2
FXR2-201ENST00000250113 ANKRD30BQ9BXX2 1392 aa27.56■■■□□ 2
FXR2-201ENST00000250113 ANKRD30AQ9BXX3 1397 aa27.53■■■□□ 2
FXR2-201ENST00000250113 TSPY4P0CV99 314 aa27.53■■■□□ 2
FXR2-201ENST00000250113 TSPY10P0CW01 314 aa27.53■■■□□ 2
FXR2-201ENST00000250113 HSPA5P11021 654 aaKnown RBP27.53■■■□□ 2
FXR2-201ENST00000250113 CDC42BPAQ5VT25 1732 aa27.52■■■□□ 2
FXR2-201ENST00000250113 BCANQ96GW7 911 aa27.51■■■□□ 2
FXR2-201ENST00000250113 SUPT16HQ9Y5B9 1047 aaKnown RBP27.51■■□□□ 1.99
FXR2-201ENST00000250113 PKD2Q13563 968 aa27.5■■□□□ 1.99
FXR2-201ENST00000250113 NBPF8Q3BBV2 869 aa27.48■■□□□ 1.99
FXR2-201ENST00000250113 ANKRD50Q9ULJ7 1429 aa27.47■■□□□ 1.99
FXR2-201ENST00000250113 PZPP20742 1482 aa27.47■■□□□ 1.99
FXR2-201ENST00000250113 C9orf84Q5VXU9 1444 aa27.46■■□□□ 1.99
FXR2-201ENST00000250113 ANP32CO43423 234 aa27.45■■□□□ 1.98
FXR2-201ENST00000250113 EIF4G2P78344 907 aaKnown RBP eCLIP27.43■■□□□ 1.98
FXR2-201ENST00000250113 ZNF326Q5BKZ1 582 aaKnown RBP27.43■■□□□ 1.98
FXR2-201ENST00000250113 RPRD2Q5VT52 1461 aaKnown RBP27.43■■□□□ 1.98
FXR2-201ENST00000250113 ADGRL2O95490 1459 aa27.42■■□□□ 1.98
FXR2-201ENST00000250113 NUP155O75694 1391 aa27.42■■□□□ 1.98
FXR2-201ENST00000250113 ADGBQ8N7X0 1667 aa27.4■■□□□ 1.98
FXR2-201ENST00000250113 CROCC2H7BZ55 1655 aa27.39■■□□□ 1.98
FXR2-201ENST00000250113 WASHC2AQ641Q2 1341 aa27.39■■□□□ 1.98
FXR2-201ENST00000250113 SHROOM2Q13796 1616 aa27.38■■□□□ 1.97
FXR2-201ENST00000250113 KIF15Q9NS87 1388 aa27.37■■□□□ 1.97
FXR2-201ENST00000250113 C11orf95C9JLR9 678 aaPredicted RBP27.35■■□□□ 1.97
FXR2-201ENST00000250113 MBD5Q9P267 1494 aa27.35■■□□□ 1.97
FXR2-201ENST00000250113 KIAA1107Q9UPP5 1409 aa27.34■■□□□ 1.97
FXR2-201ENST00000250113 TEX14Q8IWB6 1497 aa27.33■■□□□ 1.97
FXR2-201ENST00000250113 SAMD9LQ8IVG5 1584 aa27.31■■□□□ 1.96
FXR2-201ENST00000250113 CDC42BPBQ9Y5S2 1711 aa27.31■■□□□ 1.96
FXR2-201ENST00000250113 ARHGAP5Q13017 1502 aa27.3■■□□□ 1.96
FXR2-201ENST00000250113 TTC37Q6PGP7 1564 aa27.3■■□□□ 1.96
FXR2-201ENST00000250113 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.3■■□□□ 1.96
FXR2-201ENST00000250113 ABCC2Q92887 1545 aa27.3■■□□□ 1.96
FXR2-201ENST00000250113 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.28■■□□□ 1.96
FXR2-201ENST00000250113 SHANK2Q9UPX8 1470 aa27.28■■□□□ 1.96
FXR2-201ENST00000250113 CCDC141Q6ZP82 1450 aa27.26■■□□□ 1.95
FXR2-201ENST00000250113 SYCP2Q9BX26 1530 aa27.25■■□□□ 1.95
FXR2-201ENST00000250113 KDM2AQ9Y2K7 1162 aa27.25■■□□□ 1.95
FXR2-201ENST00000250113 PREX2Q70Z35 1606 aa27.24■■□□□ 1.95
FXR2-201ENST00000250113 CCER2I3L3R5 266 aa27.22■■□□□ 1.95
FXR2-201ENST00000250113 FKBP8Q14318 412 aa27.21■■□□□ 1.95
FXR2-201ENST00000250113 CLASP1Q7Z460 1538 aa27.21■■□□□ 1.95
FXR2-201ENST00000250113 RSPH4AQ5TD94 716 aa27.2■■□□□ 1.95
FXR2-201ENST00000250113 POLR3GLQ9BT43 218 aa27.2■■□□□ 1.95
FXR2-201ENST00000250113 ARHGEF5Q12774 1597 aa27.2■■□□□ 1.94
FXR2-201ENST00000250113 CNGB1Q14028 1251 aaPredicted RBP27.19■■□□□ 1.94
FXR2-201ENST00000250113 CCDC7Q96M83 1385 aa27.15■■□□□ 1.94
FXR2-201ENST00000250113 DCAF11Q8TEB1 546 aa27.14■■□□□ 1.93
FXR2-201ENST00000250113 ZCCHC11Q5TAX3 1644 aaKnown RBP27.13■■□□□ 1.93
FXR2-201ENST00000250113 EFCAB2Q5VUJ9 269 aa27.13■■□□□ 1.93
FXR2-201ENST00000250113 ARHGEF12Q9NZN5 1544 aa27.13■■□□□ 1.93
FXR2-201ENST00000250113 RGL3Q3MIN7 710 aa27.12■■□□□ 1.93
FXR2-201ENST00000250113 KIF7Q2M1P5 1343 aa27.12■■□□□ 1.93
FXR2-201ENST00000250113 SPATA31E1Q6ZUB1 1445 aa27.1■■□□□ 1.93
FXR2-201ENST00000250113 AFAP1Q8N556 730 aa27.09■■□□□ 1.93
FXR2-201ENST00000250113 MYO5CQ9NQX4 1742 aa27.08■■□□□ 1.93
FXR2-201ENST00000250113 PLCH2O75038 1416 aa27.08■■□□□ 1.93
FXR2-201ENST00000250113 CCDC184Q52MB2 194 aa27.08■■□□□ 1.93
FXR2-201ENST00000250113 PLEKHH2Q8IVE3 1493 aa27.08■■□□□ 1.93
FXR2-201ENST00000250113 FAM135AQ9P2D6 1515 aa27.06■■□□□ 1.92
FXR2-201ENST00000250113 USP47Q96K76 1375 aa27.06■■□□□ 1.92
FXR2-201ENST00000250113 CNTLNQ9NXG0 1405 aa27.05■■□□□ 1.92
FXR2-201ENST00000250113 CARD11Q9BXL7 1154 aa27.04■■□□□ 1.92
FXR2-201ENST00000250113 TRAPPC8Q9Y2L5 1435 aa27.04■■□□□ 1.92
FXR2-201ENST00000250113 UHRF1BP1LA0JNW5 1464 aa27.03■■□□□ 1.92
FXR2-201ENST00000250113 IRX6P78412 446 aaPredicted RBP27.03■■□□□ 1.92
FXR2-201ENST00000250113 TSHZ2Q9NRE2 1034 aa27.03■■□□□ 1.92
FXR2-201ENST00000250113 KDM5DQ9BY66 1539 aa27.02■■□□□ 1.92
FXR2-201ENST00000250113 MYT1LQ9UL68 1186 aa27■■□□□ 1.91
FXR2-201ENST00000250113 HNRNPUQ00839 825 aaKnown RBP eCLIP26.99■■□□□ 1.91
FXR2-201ENST00000250113 PRKRIP1Q9H875 184 aaPredicted RBP26.98■■□□□ 1.91
FXR2-201ENST00000250113 SENP3-EIF4A1A0A087X0R7 540 aa26.98■■□□□ 1.91
FXR2-201ENST00000250113 CCDC144AA2RUR9 1427 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms