RNA–Protein interactions for RNA: ENST00000245934.11

SYMPK-201, Transcript of symplekin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYMPK, Length 4,195 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-201ENST00000245934 ARXQ96QS3 562 aa17.13■□□□□ 0.33
SYMPK-201ENST00000245934 NUP155O75694 1391 aa17.13■□□□□ 0.33
SYMPK-201ENST00000245934 SOX12O15370 315 aa17.12■□□□□ 0.33
SYMPK-201ENST00000245934 FMN1Q68DA7 1419 aa17.12■□□□□ 0.33
SYMPK-201ENST00000245934 DHX57Q6P158 1386 aaKnown RBP17.11■□□□□ 0.33
SYMPK-201ENST00000245934 STK26Q9P289 416 aa17.11■□□□□ 0.33
SYMPK-201ENST00000245934 PRKCSHP14314 528 aaPredicted RBP17.08■□□□□ 0.32
SYMPK-201ENST00000245934 DNMBPQ6XZF7 1577 aa17.08■□□□□ 0.32
SYMPK-201ENST00000245934 BIVM-ERCC5R4GMW8 1640 aa17.07■□□□□ 0.32
SYMPK-201ENST00000245934 LAS1LQ9Y4W2 734 aaKnown RBP17.06■□□□□ 0.32
SYMPK-201ENST00000245934 POGKQ9P215 609 aa17.05■□□□□ 0.32
SYMPK-201ENST00000245934 KIF3BO15066 747 aa17.04■□□□□ 0.32
SYMPK-201ENST00000245934 FRAT1Q92837 279 aaPredicted RBP17.04■□□□□ 0.32
SYMPK-201ENST00000245934 A0A0G2JS52 829 aa17.03■□□□□ 0.32
SYMPK-201ENST00000245934 URB2Q14146 1524 aaKnown RBP17.03■□□□□ 0.32
SYMPK-201ENST00000245934 U2SURPO15042 1029 aaKnown RBP17.03■□□□□ 0.32
SYMPK-201ENST00000245934 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.03■□□□□ 0.32
SYMPK-201ENST00000245934 RGS3P49796 1198 aa17.01■□□□□ 0.31
SYMPK-201ENST00000245934 LMOD2Q6P5Q4 547 aa17.01■□□□□ 0.31
SYMPK-201ENST00000245934 LAMC3Q9Y6N6 1575 aa17■□□□□ 0.31
SYMPK-201ENST00000245934 TRHP20396 242 aaPredicted RBP16.99■□□□□ 0.31
SYMPK-201ENST00000245934 ABCA10Q8WWZ4 1543 aa16.99■□□□□ 0.31
SYMPK-201ENST00000245934 PHLDB1Q86UU1 1377 aa16.99■□□□□ 0.31
SYMPK-201ENST00000245934 HSP90AA1P07900 732 aaKnown RBP16.99■□□□□ 0.31
SYMPK-201ENST00000245934 TIMELESSQ9UNS1 1208 aa16.98■□□□□ 0.31
SYMPK-201ENST00000245934 MRC2Q9UBG0 1479 aa16.98■□□□□ 0.31
SYMPK-201ENST00000245934 CARMIL2Q6F5E8 1435 aa16.97■□□□□ 0.31
SYMPK-201ENST00000245934 EFCAB2Q5VUJ9 269 aa16.97■□□□□ 0.31
SYMPK-201ENST00000245934 ST20-MTHFSA0A0A6YYL1 179 aa16.97■□□□□ 0.31
SYMPK-201ENST00000245934 TMF1P82094 1093 aa16.97■□□□□ 0.31
SYMPK-201ENST00000245934 SRPK2P78362 688 aaKnown RBP16.96■□□□□ 0.31
SYMPK-201ENST00000245934 NOP58Q9Y2X3 529 aaKnown RBP16.95■□□□□ 0.3
SYMPK-201ENST00000245934 NUTM2FA1L443 756 aa16.92■□□□□ 0.3
SYMPK-201ENST00000245934 CDCA8Q53HL2 280 aa16.92■□□□□ 0.3
SYMPK-201ENST00000245934 LRRC9Q6ZRR7 1453 aa16.92■□□□□ 0.3
SYMPK-201ENST00000245934 GRIN2BQ13224 1484 aa16.92■□□□□ 0.3
SYMPK-201ENST00000245934 ROCK2O75116 1388 aaKnown RBP16.91■□□□□ 0.3
SYMPK-201ENST00000245934 CYB5RLQ6IPT4 315 aa16.9■□□□□ 0.3
SYMPK-201ENST00000245934 ANKRD30AQ9BXX3 1397 aa16.9■□□□□ 0.3
SYMPK-201ENST00000245934 UPF2Q9HAU5 1272 aaKnown RBP16.9■□□□□ 0.3
SYMPK-201ENST00000245934 PPP4R2Q9NY27 417 aa16.9■□□□□ 0.3
SYMPK-201ENST00000245934 CFAP53Q96M91 514 aa16.89■□□□□ 0.3
SYMPK-201ENST00000245934 CCER2I3L3R5 266 aa16.89■□□□□ 0.29
SYMPK-201ENST00000245934 TRAK1Q9UPV9 953 aa16.87■□□□□ 0.29
SYMPK-201ENST00000245934 CCDC146Q8IYE0 955 aa16.87■□□□□ 0.29
SYMPK-201ENST00000245934 SPAG9O60271 1321 aaKnown RBP16.86■□□□□ 0.29
SYMPK-201ENST00000245934 MORC1Q86VD1 984 aa16.86■□□□□ 0.29
SYMPK-201ENST00000245934 ERICH6BQ5W0A0 696 aa16.86■□□□□ 0.29
SYMPK-201ENST00000245934 CASKIN1Q8WXD9 1431 aa16.86■□□□□ 0.29
SYMPK-201ENST00000245934 ZNF608Q9ULD9 1512 aaPredicted RBP16.85■□□□□ 0.29
SYMPK-201ENST00000245934 NAP1L5Q96NT1 182 aaPredicted RBP16.84■□□□□ 0.29
SYMPK-201ENST00000245934 SNAPC4Q5SXM2 1469 aa16.83■□□□□ 0.28
SYMPK-201ENST00000245934 IFT140Q96RY7 1462 aa16.83■□□□□ 0.28
SYMPK-201ENST00000245934 PTPRGP23470 1445 aa16.83■□□□□ 0.28
SYMPK-201ENST00000245934 FTSJ3Q8IY81 847 aaKnown RBP16.82■□□□□ 0.28
SYMPK-201ENST00000245934 MAPK8IP3Q9UPT6 1336 aa16.82■□□□□ 0.28
SYMPK-201ENST00000245934 ANO8Q9HCE9 1232 aaPredicted RBP16.82■□□□□ 0.28
SYMPK-201ENST00000245934 ANP32BQ92688 251 aaKnown RBP16.8■□□□□ 0.28
SYMPK-201ENST00000245934 RRBP1Q9P2E9 1410 aaKnown RBP16.8■□□□□ 0.28
SYMPK-201ENST00000245934 KANK1Q14678 1352 aa16.8■□□□□ 0.28
SYMPK-201ENST00000245934 FGD6Q6ZV73 1430 aa16.8■□□□□ 0.28
SYMPK-201ENST00000245934 WASHC2CQ9Y4E1 1318 aa16.79■□□□□ 0.28
SYMPK-201ENST00000245934 TIAM1Q13009 1591 aa16.79■□□□□ 0.28
SYMPK-201ENST00000245934 U2AF1L5P0DN76 240 aaPredicted RBP16.79■□□□□ 0.28
SYMPK-201ENST00000245934 U2AF1Q01081 240 aaKnown RBP eCLIP16.79■□□□□ 0.28
SYMPK-201ENST00000245934 TPRNQ4KMQ1 711 aa16.79■□□□□ 0.28
SYMPK-201ENST00000245934 FYCO1Q9BQS8 1478 aa16.78■□□□□ 0.28
SYMPK-201ENST00000245934 AFAP1Q8N556 730 aa16.78■□□□□ 0.28
SYMPK-201ENST00000245934 PANK3Q9H999 370 aa16.78■□□□□ 0.28
SYMPK-201ENST00000245934 RRP7AQ9Y3A4 280 aaKnown RBP16.78■□□□□ 0.28
SYMPK-201ENST00000245934 CCDC18Q5T9S5 1454 aa16.78■□□□□ 0.28
SYMPK-201ENST00000245934 PRKRIP1Q9H875 184 aaPredicted RBP16.78■□□□□ 0.28
SYMPK-201ENST00000245934 NUDCQ9Y266 331 aa16.77■□□□□ 0.28
SYMPK-201ENST00000245934 PCF11O94913 1555 aaKnown RBP16.77■□□□□ 0.27
SYMPK-201ENST00000245934 CLUAP1Q96AJ1 413 aa16.77■□□□□ 0.27
SYMPK-201ENST00000245934 PLIN1O60240 522 aa16.76■□□□□ 0.27
SYMPK-201ENST00000245934 NCOA2Q15596 1464 aa16.76■□□□□ 0.27
SYMPK-201ENST00000245934 EFCAB5A4FU69 1503 aa16.76■□□□□ 0.27
SYMPK-201ENST00000245934 PRDM2Q13029 1718 aa16.75■□□□□ 0.27
SYMPK-201ENST00000245934 KTN1Q86UP2 1357 aaKnown RBP16.74■□□□□ 0.27
SYMPK-201ENST00000245934 MYOM3Q5VTT5 1437 aa16.74■□□□□ 0.27
SYMPK-201ENST00000245934 RCAN3Q9UKA8 241 aa16.74■□□□□ 0.27
SYMPK-201ENST00000245934 APBB1O00213 710 aa16.73■□□□□ 0.27
SYMPK-201ENST00000245934 CUL7Q14999 1698 aa16.73■□□□□ 0.27
SYMPK-201ENST00000245934 MYH16Q9H6N6 1097 aa16.72■□□□□ 0.27
SYMPK-201ENST00000245934 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.72■□□□□ 0.27
SYMPK-201ENST00000245934 HAP1P54257 671 aaPredicted RBP16.72■□□□□ 0.27
SYMPK-201ENST00000245934 KIF21AQ7Z4S6 1674 aa16.72■□□□□ 0.27
SYMPK-201ENST00000245934 SPRYD3Q8NCJ5 442 aa16.7■□□□□ 0.26
SYMPK-201ENST00000245934 BCL2L13Q9BXK5 485 aa16.7■□□□□ 0.26
SYMPK-201ENST00000245934 PAK3O75914 559 aaPredicted RBP16.7■□□□□ 0.26
SYMPK-201ENST00000245934 CDK13Q14004 1512 aaKnown RBP16.69■□□□□ 0.26
SYMPK-201ENST00000245934 USP47Q96K76 1375 aa16.67■□□□□ 0.26
SYMPK-201ENST00000245934 NBPF8Q3BBV2 869 aa16.67■□□□□ 0.26
SYMPK-201ENST00000245934 ELL2O00472 640 aaPredicted RBP16.66■□□□□ 0.26
SYMPK-201ENST00000245934 NBPF1Q3BBV0 1214 aa16.66■□□□□ 0.26
SYMPK-201ENST00000245934 NLRP13Q86W25 1043 aa16.66■□□□□ 0.26
SYMPK-201ENST00000245934 IQGAP2Q13576 1575 aa16.66■□□□□ 0.26
SYMPK-201ENST00000245934 WASHC2AQ641Q2 1341 aa16.66■□□□□ 0.26
SYMPK-201ENST00000245934 TMEM132EQ6IEE7 984 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms