RNA–Protein interactions for RNA: ENST00000244458.6

PACSIN1-201, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACSIN1, Length 4,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-201ENST00000244458 PTPRGP23470 1445 aa15.91■□□□□ 0.14
PACSIN1-201ENST00000244458 ST20-MTHFSA0A0A6YYL1 179 aa15.91■□□□□ 0.14
PACSIN1-201ENST00000244458 BCL11AQ9H165 835 aa15.91■□□□□ 0.14
PACSIN1-201ENST00000244458 SNAPC4Q5SXM2 1469 aa15.91■□□□□ 0.14
PACSIN1-201ENST00000244458 MRC2Q9UBG0 1479 aa15.91■□□□□ 0.14
PACSIN1-201ENST00000244458 NAIPQ13075 1403 aa15.91■□□□□ 0.14
PACSIN1-201ENST00000244458 EFCAB5A4FU69 1503 aa15.9■□□□□ 0.14
PACSIN1-201ENST00000244458 CCDC184Q52MB2 194 aa15.89■□□□□ 0.14
PACSIN1-201ENST00000244458 HFM1A2PYH4 1435 aa15.87■□□□□ 0.13
PACSIN1-201ENST00000244458 TNNT2P45379 298 aaPredicted RBP15.87■□□□□ 0.13
PACSIN1-201ENST00000244458 PRKRIP1Q9H875 184 aaPredicted RBP15.86■□□□□ 0.13
PACSIN1-201ENST00000244458 LAMC3Q9Y6N6 1575 aa15.86■□□□□ 0.13
PACSIN1-201ENST00000244458 TSHZ2Q9NRE2 1034 aa15.85■□□□□ 0.13
PACSIN1-201ENST00000244458 EPRSP07814 1512 aaKnown RBP15.85■□□□□ 0.13
PACSIN1-201ENST00000244458 C11orf95C9JLR9 678 aaPredicted RBP15.85■□□□□ 0.13
PACSIN1-201ENST00000244458 GGT6Q6P531 493 aa15.85■□□□□ 0.13
PACSIN1-201ENST00000244458 STAG3Q9UJ98 1225 aa15.84■□□□□ 0.13
PACSIN1-201ENST00000244458 ROCK2O75116 1388 aaKnown RBP15.84■□□□□ 0.13
PACSIN1-201ENST00000244458 PLB1Q6P1J6 1458 aa15.83■□□□□ 0.13
PACSIN1-201ENST00000244458 WDR43Q15061 677 aaKnown RBP eCLIP15.83■□□□□ 0.12
PACSIN1-201ENST00000244458 EFCAB2Q5VUJ9 269 aa15.83■□□□□ 0.12
PACSIN1-201ENST00000244458 MAPKBP1O60336 1514 aa15.82■□□□□ 0.12
PACSIN1-201ENST00000244458 KIF7Q2M1P5 1343 aa15.82■□□□□ 0.12
PACSIN1-201ENST00000244458 KIF3BO15066 747 aa15.82■□□□□ 0.12
PACSIN1-201ENST00000244458 CANXP27824 592 aaKnown RBP15.81■□□□□ 0.12
PACSIN1-201ENST00000244458 NUTM2DQ5VT03 806 aaPredicted RBP15.81■□□□□ 0.12
PACSIN1-201ENST00000244458 SAFB2Q14151 953 aaKnown RBP eCLIP15.81■□□□□ 0.12
PACSIN1-201ENST00000244458 DAXXQ9UER7 740 aaPredicted RBP15.8■□□□□ 0.12
PACSIN1-201ENST00000244458 KNSTRNQ9Y448 316 aa15.8■□□□□ 0.12
PACSIN1-201ENST00000244458 NEUROD2Q15784 382 aa15.8■□□□□ 0.12
PACSIN1-201ENST00000244458 IFT140Q96RY7 1462 aa15.8■□□□□ 0.12
PACSIN1-201ENST00000244458 USP47Q96K76 1375 aa15.79■□□□□ 0.12
PACSIN1-201ENST00000244458 KIF15Q9NS87 1388 aa15.78■□□□□ 0.12
PACSIN1-201ENST00000244458 AFAP1Q8N556 730 aa15.77■□□□□ 0.12
PACSIN1-201ENST00000244458 EHBP1L1Q8N3D4 1523 aa15.77■□□□□ 0.12
PACSIN1-201ENST00000244458 ANKRD50Q9ULJ7 1429 aa15.77■□□□□ 0.12
PACSIN1-201ENST00000244458 IQGAP2Q13576 1575 aa15.76■□□□□ 0.11
PACSIN1-201ENST00000244458 CCDC7Q96M83 1385 aa15.76■□□□□ 0.11
PACSIN1-201ENST00000244458 MAP3K1Q13233 1512 aa15.76■□□□□ 0.11
PACSIN1-201ENST00000244458 RBM19Q9Y4C8 960 aaKnown RBP15.76■□□□□ 0.11
PACSIN1-201ENST00000244458 SPAG9O60271 1321 aaKnown RBP15.75■□□□□ 0.11
PACSIN1-201ENST00000244458 CUL7Q14999 1698 aa15.75■□□□□ 0.11
PACSIN1-201ENST00000244458 NBPF1Q3BBV0 1214 aa15.74■□□□□ 0.11
PACSIN1-201ENST00000244458 DAPK1P53355 1430 aa15.74■□□□□ 0.11
PACSIN1-201ENST00000244458 KIAA0586Q9BVV6 1533 aa15.74■□□□□ 0.11
PACSIN1-201ENST00000244458 PPP4R2Q9NY27 417 aa15.74■□□□□ 0.11
PACSIN1-201ENST00000244458 TMF1P82094 1093 aa15.74■□□□□ 0.11
PACSIN1-201ENST00000244458 TROQ12816 1431 aaPredicted RBP15.72■□□□□ 0.11
PACSIN1-201ENST00000244458 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.72■□□□□ 0.11
PACSIN1-201ENST00000244458 NBR1Q14596 966 aa15.72■□□□□ 0.11
PACSIN1-201ENST00000244458 THOC2Q8NI27 1593 aaKnown RBP15.72■□□□□ 0.11
PACSIN1-201ENST00000244458 MLECQ14165 292 aa15.72■□□□□ 0.11
PACSIN1-201ENST00000244458 ABCC5O15440 1437 aa15.71■□□□□ 0.11
PACSIN1-201ENST00000244458 SUPT6HQ7KZ85 1726 aaKnown RBP15.71■□□□□ 0.11
PACSIN1-201ENST00000244458 PTPN23Q9H3S7 1636 aa15.7■□□□□ 0.1
PACSIN1-201ENST00000244458 MIA2Q96PC5 1412 aa15.7■□□□□ 0.1
PACSIN1-201ENST00000244458 GRIN2AQ12879 1464 aa15.69■□□□□ 0.1
PACSIN1-201ENST00000244458 PANK3Q9H999 370 aa15.69■□□□□ 0.1
PACSIN1-201ENST00000244458 CCDC144AA2RUR9 1427 aa15.69■□□□□ 0.1
PACSIN1-201ENST00000244458 STK26Q9P289 416 aa15.69■□□□□ 0.1
PACSIN1-201ENST00000244458 HECW1Q76N89 1606 aa15.68■□□□□ 0.1
PACSIN1-201ENST00000244458 ANP32AP39687 249 aaKnown RBP15.68■□□□□ 0.1
PACSIN1-201ENST00000244458 ESF1Q9H501 851 aaKnown RBP15.68■□□□□ 0.1
PACSIN1-201ENST00000244458 ARHGEF11O15085 1522 aa15.68■□□□□ 0.1
PACSIN1-201ENST00000244458 PPM1GO15355 546 aaPredicted RBP15.66■□□□□ 0.1
PACSIN1-201ENST00000244458 RTL5Q5HYW3 569 aaPredicted RBP15.66■□□□□ 0.1
PACSIN1-201ENST00000244458 RSPH4AQ5TD94 716 aa15.65■□□□□ 0.1
PACSIN1-201ENST00000244458 ANKRD30BQ9BXX2 1392 aa15.65■□□□□ 0.1
PACSIN1-201ENST00000244458 C9orf84Q5VXU9 1444 aa15.64■□□□□ 0.09
PACSIN1-201ENST00000244458 KIF21AQ7Z4S6 1674 aa15.64■□□□□ 0.09
PACSIN1-201ENST00000244458 KTN1Q86UP2 1357 aaKnown RBP15.64■□□□□ 0.09
PACSIN1-201ENST00000244458 PLEKHG5O94827 1062 aa15.64■□□□□ 0.09
PACSIN1-201ENST00000244458 CCDC146Q8IYE0 955 aa15.64■□□□□ 0.09
PACSIN1-201ENST00000244458 CNTLNQ9NXG0 1405 aa15.63■□□□□ 0.09
PACSIN1-201ENST00000244458 SLC24A1O60721 1099 aa15.63■□□□□ 0.09
PACSIN1-201ENST00000244458 TRAK1Q9UPV9 953 aa15.63■□□□□ 0.09
PACSIN1-201ENST00000244458 PLIN1O60240 522 aa15.62■□□□□ 0.09
PACSIN1-201ENST00000244458 KANK1Q14678 1352 aa15.6■□□□□ 0.09
PACSIN1-201ENST00000244458 NUP153P49790 1475 aaKnown RBP15.6■□□□□ 0.09
PACSIN1-201ENST00000244458 KIAA1107Q9UPP5 1409 aa15.6■□□□□ 0.09
PACSIN1-201ENST00000244458 CDCA8Q53HL2 280 aa15.6■□□□□ 0.09
PACSIN1-201ENST00000244458 NUDCQ9Y266 331 aa15.6■□□□□ 0.09
PACSIN1-201ENST00000244458 NCOA1Q15788 1441 aa15.59■□□□□ 0.09
PACSIN1-201ENST00000244458 SYNJ2O15056 1496 aa15.59■□□□□ 0.09
PACSIN1-201ENST00000244458 CAMSAP2Q08AD1 1489 aa15.59■□□□□ 0.09
PACSIN1-201ENST00000244458 RALBP1Q15311 655 aa15.58■□□□□ 0.09
PACSIN1-201ENST00000244458 CYB5RLQ6IPT4 315 aa15.58■□□□□ 0.09
PACSIN1-201ENST00000244458 NLRP13Q86W25 1043 aa15.58■□□□□ 0.09
PACSIN1-201ENST00000244458 UGGT2Q9NYU1 1516 aa15.58■□□□□ 0.08
PACSIN1-201ENST00000244458 MAGI3Q5TCQ9 1506 aa15.57■□□□□ 0.08
PACSIN1-201ENST00000244458 RCAN3Q9UKA8 241 aa15.57■□□□□ 0.08
PACSIN1-201ENST00000244458 ARHGAP5Q13017 1502 aa15.57■□□□□ 0.08
PACSIN1-201ENST00000244458 FRAT1Q92837 279 aaPredicted RBP15.57■□□□□ 0.08
PACSIN1-201ENST00000244458 ANP32EQ9BTT0 268 aa15.57■□□□□ 0.08
PACSIN1-201ENST00000244458 ZBED9Q6R2W3 1325 aa15.56■□□□□ 0.08
PACSIN1-201ENST00000244458 RGS3P49796 1198 aa15.56■□□□□ 0.08
PACSIN1-201ENST00000244458 ARID4BQ4LE39 1312 aaPredicted RBP15.56■□□□□ 0.08
PACSIN1-201ENST00000244458 WASHC2CQ9Y4E1 1318 aa15.56■□□□□ 0.08
PACSIN1-201ENST00000244458 CTTNBP2Q8WZ74 1663 aa15.56■□□□□ 0.08
PACSIN1-201ENST00000244458 POGKQ9P215 609 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms