RNA–Protein interactions for RNA: ENST00000244227.7

SNRNP27-201, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP27, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-201ENST00000244227 CDC42BPAQ5VT25 1732 aa20.28■□□□□ 0.84
SNRNP27-201ENST00000244227 KDM5BQ9UGL1 1544 aa20.27■□□□□ 0.84
SNRNP27-201ENST00000244227 RRP7BPQ9NSQ0 103 aa20.27■□□□□ 0.84
SNRNP27-201ENST00000244227 GCC2Q8IWJ2 1684 aa20.25■□□□□ 0.83
SNRNP27-201ENST00000244227 ROCK1Q13464 1354 aa20.24■□□□□ 0.83
SNRNP27-201ENST00000244227 ZCCHC11Q5TAX3 1644 aaKnown RBP20.24■□□□□ 0.83
SNRNP27-201ENST00000244227 ZNF777Q9ULD5 760 aaPredicted RBP20.23■□□□□ 0.83
SNRNP27-201ENST00000244227 KDM6BO15054 1643 aa20.2■□□□□ 0.82
SNRNP27-201ENST00000244227 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.2■□□□□ 0.82
SNRNP27-201ENST00000244227 TTC37Q6PGP7 1564 aa20.17■□□□□ 0.82
SNRNP27-201ENST00000244227 PREX2Q70Z35 1606 aa20.17■□□□□ 0.82
SNRNP27-201ENST00000244227 CDC42BPBQ9Y5S2 1711 aa20.16■□□□□ 0.82
SNRNP27-201ENST00000244227 CROCC2H7BZ55 1655 aa20.15■□□□□ 0.82
SNRNP27-201ENST00000244227 NCOA1Q15788 1441 aa20.14■□□□□ 0.81
SNRNP27-201ENST00000244227 ADGRL2O95490 1459 aa20.14■□□□□ 0.81
SNRNP27-201ENST00000244227 KCNH8Q96L42 1107 aa20.13■□□□□ 0.81
SNRNP27-201ENST00000244227 SAMD9LQ8IVG5 1584 aa20.13■□□□□ 0.81
SNRNP27-201ENST00000244227 MBD5Q9P267 1494 aa20.13■□□□□ 0.81
SNRNP27-201ENST00000244227 SIN3AQ96ST3 1273 aa20.13■□□□□ 0.81
SNRNP27-201ENST00000244227 SHANK2Q9UPX8 1470 aa20.1■□□□□ 0.81
SNRNP27-201ENST00000244227 ADGBQ8N7X0 1667 aa20.1■□□□□ 0.81
SNRNP27-201ENST00000244227 ARHGEF5Q12774 1597 aa20.1■□□□□ 0.81
SNRNP27-201ENST00000244227 DENND4BO75064 1496 aaPredicted RBP20.1■□□□□ 0.81
SNRNP27-201ENST00000244227 HNRNPMP52272 730 aaKnown RBP eCLIP20.09■□□□□ 0.81
SNRNP27-201ENST00000244227 ZNF316A6NFI3 1004 aaPredicted RBP20.07■□□□□ 0.8
SNRNP27-201ENST00000244227 PLCH2O75038 1416 aa20.07■□□□□ 0.8
SNRNP27-201ENST00000244227 MYO5CQ9NQX4 1742 aa20.07■□□□□ 0.8
SNRNP27-201ENST00000244227 ARHGAP5Q13017 1502 aa20.07■□□□□ 0.8
SNRNP27-201ENST00000244227 ANKRD30AQ9BXX3 1397 aa20.06■□□□□ 0.8
SNRNP27-201ENST00000244227 C9orf84Q5VXU9 1444 aa20.06■□□□□ 0.8
SNRNP27-201ENST00000244227 TRIM52Q96A61 297 aa20.06■□□□□ 0.8
SNRNP27-201ENST00000244227 WDR7Q9Y4E6 1490 aa20.06■□□□□ 0.8
SNRNP27-201ENST00000244227 NEUROD1Q13562 356 aa20.05■□□□□ 0.8
SNRNP27-201ENST00000244227 ACIN1Q9UKV3 1341 aaKnown RBP20.05■□□□□ 0.8
SNRNP27-201ENST00000244227 RSPH4AQ5TD94 716 aa20.04■□□□□ 0.8
SNRNP27-201ENST00000244227 CCDC141Q6ZP82 1450 aa20.03■□□□□ 0.8
SNRNP27-201ENST00000244227 TSPY4P0CV99 314 aa20.03■□□□□ 0.8
SNRNP27-201ENST00000244227 TSPY10P0CW01 314 aa20.03■□□□□ 0.8
SNRNP27-201ENST00000244227 MPHOSPH9Q99550 1183 aa20.03■□□□□ 0.8
SNRNP27-201ENST00000244227 TIMELESSQ9UNS1 1208 aa20.03■□□□□ 0.8
SNRNP27-201ENST00000244227 KIAA1107Q9UPP5 1409 aa20.03■□□□□ 0.8
SNRNP27-201ENST00000244227 SYCP2Q9BX26 1530 aa20.02■□□□□ 0.79
SNRNP27-201ENST00000244227 ASXL2Q76L83 1435 aa20■□□□□ 0.79
SNRNP27-201ENST00000244227 PLEKHH2Q8IVE3 1493 aa20■□□□□ 0.79
SNRNP27-201ENST00000244227 ARHGEF12Q9NZN5 1544 aa19.99■□□□□ 0.79
SNRNP27-201ENST00000244227 EFCAB2Q5VUJ9 269 aa19.99■□□□□ 0.79
SNRNP27-201ENST00000244227 ANKRD50Q9ULJ7 1429 aa19.98■□□□□ 0.79
SNRNP27-201ENST00000244227 ARAP3Q8WWN8 1544 aa19.98■□□□□ 0.79
SNRNP27-201ENST00000244227 MAST1Q9Y2H9 1570 aa19.96■□□□□ 0.79
SNRNP27-201ENST00000244227 PZPP20742 1482 aa19.95■□□□□ 0.78
SNRNP27-201ENST00000244227 ABCA9Q8IUA7 1624 aa19.95■□□□□ 0.78
SNRNP27-201ENST00000244227 KIF15Q9NS87 1388 aa19.95■□□□□ 0.78
SNRNP27-201ENST00000244227 ABCC1P33527 1531 aa19.94■□□□□ 0.78
SNRNP27-201ENST00000244227 NPM1P06748 294 aaKnown RBP eCLIP19.93■□□□□ 0.789e-7■■■■■ 49.4
SNRNP27-201ENST00000244227 PPP1R15AO75807 674 aaPredicted RBP19.92■□□□□ 0.78
SNRNP27-201ENST00000244227 DIEXFQ68CQ4 756 aaKnown RBP19.92■□□□□ 0.78
SNRNP27-201ENST00000244227 FOXD1Q16676 465 aa19.91■□□□□ 0.78
SNRNP27-201ENST00000244227 SLC4A1APQ9BWU0 796 aaKnown RBP19.91■□□□□ 0.78
SNRNP27-201ENST00000244227 ANKRD30BQ9BXX2 1392 aa19.9■□□□□ 0.78
SNRNP27-201ENST00000244227 TRAPPC8Q9Y2L5 1435 aa19.89■□□□□ 0.77
SNRNP27-201ENST00000244227 TONSLQ96HA7 1378 aa19.89■□□□□ 0.77
SNRNP27-201ENST00000244227 PLXNC1O60486 1568 aa19.87■□□□□ 0.77
SNRNP27-201ENST00000244227 KDM5DQ9BY66 1539 aa19.86■□□□□ 0.77
SNRNP27-201ENST00000244227 FANCAO15360 1455 aa19.86■□□□□ 0.77
SNRNP27-201ENST00000244227 NUP155O75694 1391 aa19.84■□□□□ 0.77
SNRNP27-201ENST00000244227 RIMBP3CA6NJZ7 1639 aa19.83■□□□□ 0.76
SNRNP27-201ENST00000244227 RIMBP3BA6NNM3 1639 aa19.83■□□□□ 0.76
SNRNP27-201ENST00000244227 RIMBP3Q9UFD9 1639 aa19.83■□□□□ 0.76
SNRNP27-201ENST00000244227 AFAP1Q8N556 730 aa19.81■□□□□ 0.76
SNRNP27-201ENST00000244227 RPRD2Q5VT52 1461 aaKnown RBP19.81■□□□□ 0.76
SNRNP27-201ENST00000244227 PKD2Q13563 968 aa19.81■□□□□ 0.76
SNRNP27-201ENST00000244227 CYB5RLQ6IPT4 315 aa19.81■□□□□ 0.76
SNRNP27-201ENST00000244227 RTEL1-TNFRSF6BF6WH68 1400 aa19.8■□□□□ 0.76
SNRNP27-201ENST00000244227 DUOX2Q9NRD8 1548 aa19.8■□□□□ 0.76
SNRNP27-201ENST00000244227 ADGRL1O94910 1474 aa19.78■□□□□ 0.76
SNRNP27-201ENST00000244227 CD109Q6YHK3 1445 aa19.77■□□□□ 0.76
SNRNP27-201ENST00000244227 SCAPERQ9BY12 1400 aa19.77■□□□□ 0.76
SNRNP27-201ENST00000244227 SPAG9O60271 1321 aaKnown RBP19.77■□□□□ 0.76
SNRNP27-201ENST00000244227 UNC13BO14795 1591 aa19.76■□□□□ 0.75
SNRNP27-201ENST00000244227 ZFYVE16Q7Z3T8 1539 aa19.76■□□□□ 0.75
SNRNP27-201ENST00000244227 ERBINQ96RT1 1412 aa19.76■□□□□ 0.75
SNRNP27-201ENST00000244227 L3MBTL2Q969R5 705 aa19.75■□□□□ 0.75
SNRNP27-201ENST00000244227 FAM135AQ9P2D6 1515 aa19.74■□□□□ 0.75
SNRNP27-201ENST00000244227 TEX14Q8IWB6 1497 aa19.72■□□□□ 0.75
SNRNP27-201ENST00000244227 INO80Q9ULG1 1556 aaPredicted RBP19.72■□□□□ 0.75
SNRNP27-201ENST00000244227 MAGI2Q86UL8 1455 aa19.71■□□□□ 0.75
SNRNP27-201ENST00000244227 ATP7AQ04656 1500 aa19.7■□□□□ 0.74
SNRNP27-201ENST00000244227 IQGAP3Q86VI3 1631 aa19.68■□□□□ 0.74
SNRNP27-201ENST00000244227 CFAP74Q9C0B2 1584 aa19.68■□□□□ 0.74
SNRNP27-201ENST00000244227 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.67■□□□□ 0.74
SNRNP27-201ENST00000244227 ZNF518AQ6AHZ1 1483 aa19.65■□□□□ 0.74
SNRNP27-201ENST00000244227 GLI2P10070 1586 aa19.64■□□□□ 0.73
SNRNP27-201ENST00000244227 POGZQ7Z3K3 1410 aa19.63■□□□□ 0.73
SNRNP27-201ENST00000244227 NEO1Q92859 1461 aa19.63■□□□□ 0.73
SNRNP27-201ENST00000244227 NBPF8Q3BBV2 869 aa19.63■□□□□ 0.73
SNRNP27-201ENST00000244227 MAP3K4Q9Y6R4 1608 aa19.63■□□□□ 0.73
SNRNP27-201ENST00000244227 KIDINS220Q9ULH0 1771 aa19.63■□□□□ 0.73
SNRNP27-201ENST00000244227 DHX29Q7Z478 1369 aaKnown RBP19.62■□□□□ 0.73
SNRNP27-201ENST00000244227 KDM5CP41229 1560 aa19.62■□□□□ 0.73
SNRNP27-201ENST00000244227 PLA2R1Q13018 1463 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms