RNA–Protein interactions for RNA: ENST00000243562.13

LTBP4-202, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 3,140 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-202ENST00000243562 HECW1Q76N89 1606 aa19.48■□□□□ 0.71
LTBP4-202ENST00000243562 CCDC7Q96M83 1385 aa19.48■□□□□ 0.71
LTBP4-202ENST00000243562 MIA2Q96PC5 1412 aa19.48■□□□□ 0.71
LTBP4-202ENST00000243562 ZNF644Q9H582 1327 aaPredicted RBP19.48■□□□□ 0.71
LTBP4-202ENST00000243562 AKNAQ7Z591 1439 aa19.45■□□□□ 0.7
LTBP4-202ENST00000243562 ZNF326Q5BKZ1 582 aaKnown RBP19.44■□□□□ 0.7
LTBP4-202ENST00000243562 PPP4R2Q9NY27 417 aa19.44■□□□□ 0.7
LTBP4-202ENST00000243562 IQGAP2Q13576 1575 aa19.43■□□□□ 0.7
LTBP4-202ENST00000243562 GCC2Q8IWJ2 1684 aa19.43■□□□□ 0.7
LTBP4-202ENST00000243562 ANKRD30BQ9BXX2 1392 aa19.42■□□□□ 0.7
LTBP4-202ENST00000243562 NCOA1Q15788 1441 aa19.41■□□□□ 0.7
LTBP4-202ENST00000243562 ZNF777Q9ULD5 760 aaPredicted RBP19.4■□□□□ 0.7
LTBP4-202ENST00000243562 KIF7Q2M1P5 1343 aa19.4■□□□□ 0.7
LTBP4-202ENST00000243562 MSH5O43196 834 aa19.4■□□□□ 0.7
LTBP4-202ENST00000243562 DAPK1P53355 1430 aa19.4■□□□□ 0.7
LTBP4-202ENST00000243562 KIF21AQ7Z4S6 1674 aa19.39■□□□□ 0.7
LTBP4-202ENST00000243562 ERICH6BQ5W0A0 696 aa19.39■□□□□ 0.69
LTBP4-202ENST00000243562 B4GALNT3Q6L9W6 998 aa19.39■□□□□ 0.69
LTBP4-202ENST00000243562 TARBP1Q13395 1621 aaKnown RBP19.39■□□□□ 0.69
LTBP4-202ENST00000243562 ABCC5O15440 1437 aa19.37■□□□□ 0.69
LTBP4-202ENST00000243562 RPRD2Q5VT52 1461 aaKnown RBP19.37■□□□□ 0.69
LTBP4-202ENST00000243562 ZBED9Q6R2W3 1325 aa19.36■□□□□ 0.69
LTBP4-202ENST00000243562 CFDP1Q9UEE9 299 aaPredicted RBP19.36■□□□□ 0.69
LTBP4-202ENST00000243562 ROCK1Q13464 1354 aa19.36■□□□□ 0.69
LTBP4-202ENST00000243562 WDR62O43379 1518 aa19.35■□□□□ 0.69
LTBP4-202ENST00000243562 FANCIQ9NVI1 1328 aa19.33■□□□□ 0.68
LTBP4-202ENST00000243562 SENP3-EIF4A1A0A087X0R7 540 aa19.32■□□□□ 0.68
LTBP4-202ENST00000243562 PBRM1Q86U86 1689 aa19.31■□□□□ 0.68
LTBP4-202ENST00000243562 ADAMTS12P58397 1594 aa19.3■□□□□ 0.68
LTBP4-202ENST00000243562 TEX14Q8IWB6 1497 aa19.29■□□□□ 0.68
LTBP4-202ENST00000243562 PKD2Q13563 968 aa19.29■□□□□ 0.68
LTBP4-202ENST00000243562 SPATA31E1Q6ZUB1 1445 aa19.27■□□□□ 0.67
LTBP4-202ENST00000243562 FBLN2P98095 1184 aa19.27■□□□□ 0.67
LTBP4-202ENST00000243562 PRG4Q92954 1404 aaPredicted RBP19.26■□□□□ 0.67
LTBP4-202ENST00000243562 NUP153P49790 1475 aaKnown RBP19.25■□□□□ 0.67
LTBP4-202ENST00000243562 ZNF608Q9ULD9 1512 aaPredicted RBP19.25■□□□□ 0.67
LTBP4-202ENST00000243562 DNMT1P26358 1616 aaKnown RBP19.24■□□□□ 0.67
LTBP4-202ENST00000243562 USP47Q96K76 1375 aa19.23■□□□□ 0.67
LTBP4-202ENST00000243562 KIAA0586Q9BVV6 1533 aa19.23■□□□□ 0.67
LTBP4-202ENST00000243562 MRC2Q9UBG0 1479 aa19.22■□□□□ 0.67
LTBP4-202ENST00000243562 KDM2AQ9Y2K7 1162 aa19.22■□□□□ 0.67
LTBP4-202ENST00000243562 DISP1Q96F81 1524 aa19.22■□□□□ 0.67
LTBP4-202ENST00000243562 TMC1Q8TDI8 760 aa19.21■□□□□ 0.67
LTBP4-202ENST00000243562 CHMP7Q8WUX9 453 aaPredicted RBP19.21■□□□□ 0.67
LTBP4-202ENST00000243562 PZPP20742 1482 aa19.2■□□□□ 0.66
LTBP4-202ENST00000243562 CARD11Q9BXL7 1154 aa19.19■□□□□ 0.66
LTBP4-202ENST00000243562 KIAA1107Q9UPP5 1409 aa19.19■□□□□ 0.66
LTBP4-202ENST00000243562 KIAA0556O60303 1618 aa19.19■□□□□ 0.66
LTBP4-202ENST00000243562 TROQ12816 1431 aaPredicted RBP19.18■□□□□ 0.66
LTBP4-202ENST00000243562 NUDCQ9Y266 331 aa19.18■□□□□ 0.66
LTBP4-202ENST00000243562 CAMSAP2Q08AD1 1489 aa19.18■□□□□ 0.66
LTBP4-202ENST00000243562 ANKRD30AQ9BXX3 1397 aa19.18■□□□□ 0.66
LTBP4-202ENST00000243562 CCDC136Q96JN2 1154 aa19.18■□□□□ 0.66
LTBP4-202ENST00000243562 RAPGEF6Q8TEU7 1601 aa19.17■□□□□ 0.66
LTBP4-202ENST00000243562 DHX29Q7Z478 1369 aaKnown RBP19.16■□□□□ 0.66
LTBP4-202ENST00000243562 IFT140Q96RY7 1462 aa19.15■□□□□ 0.66
LTBP4-202ENST00000243562 NUP155O75694 1391 aa19.15■□□□□ 0.66
LTBP4-202ENST00000243562 PLEKHD1A6NEE1 506 aa19.14■□□□□ 0.65
LTBP4-202ENST00000243562 PLB1Q6P1J6 1458 aa19.14■□□□□ 0.65
LTBP4-202ENST00000243562 SMG6Q86US8 1419 aaKnown RBP19.14■□□□□ 0.65
LTBP4-202ENST00000243562 GPATCH8Q9UKJ3 1502 aaKnown RBP19.13■□□□□ 0.65
LTBP4-202ENST00000243562 TSPY4P0CV99 314 aa19.13■□□□□ 0.65
LTBP4-202ENST00000243562 TSPY10P0CW01 314 aa19.13■□□□□ 0.65
LTBP4-202ENST00000243562 ANKRD50Q9ULJ7 1429 aa19.12■□□□□ 0.65
LTBP4-202ENST00000243562 GRIN2AQ12879 1464 aa19.12■□□□□ 0.65
LTBP4-202ENST00000243562 DCAF11Q8TEB1 546 aa19.11■□□□□ 0.65
LTBP4-202ENST00000243562 PNISRQ8TF01 805 aaKnown RBP19.11■□□□□ 0.65
LTBP4-202ENST00000243562 ST20-MTHFSA0A0A6YYL1 179 aa19.11■□□□□ 0.65
LTBP4-202ENST00000243562 ARID4BQ4LE39 1312 aaPredicted RBP19.1■□□□□ 0.65
LTBP4-202ENST00000243562 JPH4Q96JJ6 628 aa19.09■□□□□ 0.65
LTBP4-202ENST00000243562 SALL2Q9Y467 1007 aaPredicted RBP19.09■□□□□ 0.65
LTBP4-202ENST00000243562 ROCK2O75116 1388 aaKnown RBP19.06■□□□□ 0.64
LTBP4-202ENST00000243562 MBD5Q9P267 1494 aa19.06■□□□□ 0.64
LTBP4-202ENST00000243562 BCORL1Q5H9F3 1711 aa19.06■□□□□ 0.64
LTBP4-202ENST00000243562 HNRNPMP52272 730 aaKnown RBP eCLIP19.06■□□□□ 0.64
LTBP4-202ENST00000243562 CARMIL2Q6F5E8 1435 aa19.05■□□□□ 0.64
LTBP4-202ENST00000243562 KIF15Q9NS87 1388 aa19.04■□□□□ 0.64
LTBP4-202ENST00000243562 KIF14Q15058 1648 aa19.04■□□□□ 0.64
LTBP4-202ENST00000243562 POLR1AO95602 1720 aaPredicted RBP19.04■□□□□ 0.64
LTBP4-202ENST00000243562 ANO8Q9HCE9 1232 aaPredicted RBP19.03■□□□□ 0.64
LTBP4-202ENST00000243562 NOP58Q9Y2X3 529 aaKnown RBP19.03■□□□□ 0.64
LTBP4-202ENST00000243562 ADGRL2O95490 1459 aa19.03■□□□□ 0.64
LTBP4-202ENST00000243562 ITSN2Q9NZM3 1697 aa19.02■□□□□ 0.64
LTBP4-202ENST00000243562 RGL3Q3MIN7 710 aa19.02■□□□□ 0.63
LTBP4-202ENST00000243562 NBR1Q14596 966 aa19.01■□□□□ 0.63
LTBP4-202ENST00000243562 C9orf84Q5VXU9 1444 aa19.01■□□□□ 0.63
LTBP4-202ENST00000243562 RNF123Q5XPI4 1314 aa19■□□□□ 0.63
LTBP4-202ENST00000243562 MYBBP1AQ9BQG0 1328 aaKnown RBP19■□□□□ 0.63
LTBP4-202ENST00000243562 ANP32AP39687 249 aaKnown RBP19■□□□□ 0.63
LTBP4-202ENST00000243562 RALBP1Q15311 655 aa19■□□□□ 0.63
LTBP4-202ENST00000243562 ADGBQ8N7X0 1667 aa19■□□□□ 0.63
LTBP4-202ENST00000243562 KDM5CP41229 1560 aa18.99■□□□□ 0.63
LTBP4-202ENST00000243562 RALGAPBQ86X10 1494 aa18.98■□□□□ 0.63
LTBP4-202ENST00000243562 PAK3O75914 559 aaPredicted RBP18.98■□□□□ 0.63
LTBP4-202ENST00000243562 UHRF1BP1Q6BDS2 1440 aa18.98■□□□□ 0.63
LTBP4-202ENST00000243562 EIF4G3O43432 1585 aaKnown RBP18.97■□□□□ 0.63
LTBP4-202ENST00000243562 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.97■□□□□ 0.63
LTBP4-202ENST00000243562 BRD4O60885 1362 aaPredicted RBP18.95■□□□□ 0.62
LTBP4-202ENST00000243562 ERCC6Q03468 1493 aa18.95■□□□□ 0.62
LTBP4-202ENST00000243562 MYT1LQ9UL68 1186 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms