RNA–Protein interactions for RNA: ENST00000242067.10

BBS9-201, Transcript of Bardet-Biedl syndrome 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene BBS9, Length 4,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS9-201ENST00000242067 PTPRKQ15262 1439 aa13.68□□□□□ -0.22
BBS9-201ENST00000242067 FRAT2O75474 233 aaPredicted RBP13.67□□□□□ -0.22
BBS9-201ENST00000242067 CARD11Q9BXL7 1154 aa13.67□□□□□ -0.22
BBS9-201ENST00000242067 CUX1P39880 1505 aa13.67□□□□□ -0.22
BBS9-201ENST00000242067 PNISRQ8TF01 805 aaKnown RBP13.66□□□□□ -0.22
BBS9-201ENST00000242067 NAIPQ13075 1403 aa13.66□□□□□ -0.22
BBS9-201ENST00000242067 NAP1L5Q96NT1 182 aaPredicted RBP13.65□□□□□ -0.22
BBS9-201ENST00000242067 HFM1A2PYH4 1435 aa13.65□□□□□ -0.22
BBS9-201ENST00000242067 CC2D1BQ5T0F9 858 aaKnown RBP13.65□□□□□ -0.22
BBS9-201ENST00000242067 SLKQ9H2G2 1235 aaPredicted RBP13.64□□□□□ -0.23
BBS9-201ENST00000242067 MS4A1P11836 297 aa13.63□□□□□ -0.23
BBS9-201ENST00000242067 ARID4BQ4LE39 1312 aaPredicted RBP13.62□□□□□ -0.23
BBS9-201ENST00000242067 NCOA1Q15788 1441 aa13.62□□□□□ -0.23
BBS9-201ENST00000242067 GLIPR1L2Q4G1C9 344 aa13.61□□□□□ -0.23
BBS9-201ENST00000242067 WASHC2CQ9Y4E1 1318 aa13.61□□□□□ -0.23
BBS9-201ENST00000242067 PCF11O94913 1555 aaKnown RBP13.6□□□□□ -0.23
BBS9-201ENST00000242067 SPRYD3Q8NCJ5 442 aa13.6□□□□□ -0.23
BBS9-201ENST00000242067 RSPH6AQ9H0K4 717 aa13.59□□□□□ -0.23
BBS9-201ENST00000242067 USP47Q96K76 1375 aa13.59□□□□□ -0.23
BBS9-201ENST00000242067 GZF1Q9H116 711 aaPredicted RBP13.59□□□□□ -0.23
BBS9-201ENST00000242067 VSIG10Q8N0Z9 540 aa13.58□□□□□ -0.24
BBS9-201ENST00000242067 ST20-MTHFSA0A0A6YYL1 179 aa13.57□□□□□ -0.24
BBS9-201ENST00000242067 CANXP27824 592 aaKnown RBP13.57□□□□□ -0.24
BBS9-201ENST00000242067 MAP3K1Q13233 1512 aa13.56□□□□□ -0.24
BBS9-201ENST00000242067 MYOM3Q5VTT5 1437 aa13.56□□□□□ -0.24
BBS9-201ENST00000242067 NCOA2Q15596 1464 aa13.56□□□□□ -0.24
BBS9-201ENST00000242067 RNF123Q5XPI4 1314 aa13.56□□□□□ -0.24
BBS9-201ENST00000242067 PKD2Q13563 968 aa13.55□□□□□ -0.24
BBS9-201ENST00000242067 RGL3Q3MIN7 710 aa13.55□□□□□ -0.24
BBS9-201ENST00000242067 C20orf194Q5TEA3 1177 aa13.55□□□□□ -0.24
BBS9-201ENST00000242067 CFTRP13569 1480 aa13.55□□□□□ -0.24
BBS9-201ENST00000242067 CASKIN1Q8WXD9 1431 aa13.55□□□□□ -0.24
BBS9-201ENST00000242067 MYBBP1AQ9BQG0 1328 aaKnown RBP13.55□□□□□ -0.24
BBS9-201ENST00000242067 FAM161AQ3B820 660 aa13.54□□□□□ -0.24
BBS9-201ENST00000242067 PTPN23Q9H3S7 1636 aa13.54□□□□□ -0.24
BBS9-201ENST00000242067 DCAF11Q8TEB1 546 aa13.54□□□□□ -0.24
BBS9-201ENST00000242067 PKNOX2Q96KN3 472 aa13.53□□□□□ -0.24
BBS9-201ENST00000242067 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.53□□□□□ -0.24
BBS9-201ENST00000242067 POGKQ9P215 609 aa13.53□□□□□ -0.24
BBS9-201ENST00000242067 RALBP1Q15311 655 aa13.52□□□□□ -0.24
BBS9-201ENST00000242067 ZNF644Q9H582 1327 aaPredicted RBP13.52□□□□□ -0.24
BBS9-201ENST00000242067 NLRP13Q86W25 1043 aa13.52□□□□□ -0.25
BBS9-201ENST00000242067 BIVM-ERCC5R4GMW8 1640 aa13.52□□□□□ -0.25
BBS9-201ENST00000242067 WDR43Q15061 677 aaKnown RBP eCLIP13.52□□□□□ -0.25
BBS9-201ENST00000242067 KIF15Q9NS87 1388 aa13.51□□□□□ -0.25
BBS9-201ENST00000242067 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.51□□□□□ -0.25
BBS9-201ENST00000242067 PNNQ9H307 717 aaKnown RBP13.51□□□□□ -0.25
BBS9-201ENST00000242067 BECN1Q14457 450 aa13.5□□□□□ -0.25
BBS9-201ENST00000242067 FAM43AQ8N2R8 423 aa13.5□□□□□ -0.25
BBS9-201ENST00000242067 FGD5Q6ZNL6 1462 aa13.5□□□□□ -0.25
BBS9-201ENST00000242067 FYCO1Q9BQS8 1478 aa13.5□□□□□ -0.25
BBS9-201ENST00000242067 PDE3BQ13370 1112 aa13.5□□□□□ -0.25
BBS9-201ENST00000242067 KTN1Q86UP2 1357 aaKnown RBP13.48□□□□□ -0.25
BBS9-201ENST00000242067 DHX29Q7Z478 1369 aaKnown RBP13.47□□□□□ -0.25
BBS9-201ENST00000242067 CENPQQ7L2Z9 268 aaPredicted RBP13.47□□□□□ -0.25
BBS9-201ENST00000242067 UPF2Q9HAU5 1272 aaKnown RBP13.47□□□□□ -0.25
BBS9-201ENST00000242067 PEG3Q9GZU2 1588 aa13.47□□□□□ -0.25
BBS9-201ENST00000242067 UNC13AQ9UPW8 1703 aa13.47□□□□□ -0.25
BBS9-201ENST00000242067 RAD54L2Q9Y4B4 1467 aa13.46□□□□□ -0.25
BBS9-201ENST00000242067 BICRAQ9NZM4 1560 aa13.46□□□□□ -0.25
BBS9-201ENST00000242067 HSP90AA1P07900 732 aaKnown RBP13.46□□□□□ -0.26
BBS9-201ENST00000242067 L1TD1Q5T7N2 865 aaKnown RBP13.46□□□□□ -0.26
BBS9-201ENST00000242067 TDRD9Q8NDG6 1382 aaKnown RBP13.45□□□□□ -0.26
BBS9-201ENST00000242067 HSP90AA2PQ14568 343 aaPredicted RBP13.45□□□□□ -0.26
BBS9-201ENST00000242067 ANKRD30BQ9BXX2 1392 aa13.45□□□□□ -0.26
BBS9-201ENST00000242067 BRD4O60885 1362 aaPredicted RBP13.44□□□□□ -0.26
BBS9-201ENST00000242067 CFDP1Q9UEE9 299 aaPredicted RBP13.44□□□□□ -0.26
BBS9-201ENST00000242067 CCDC146Q8IYE0 955 aa13.43□□□□□ -0.26
BBS9-201ENST00000242067 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.43□□□□□ -0.26
BBS9-201ENST00000242067 RRAGDQ9NQL2 400 aaPredicted RBP13.42□□□□□ -0.26
BBS9-201ENST00000242067 ROCK2O75116 1388 aaKnown RBP13.42□□□□□ -0.26
BBS9-201ENST00000242067 GOLGA6L3A6NEY3 463 aa13.42□□□□□ -0.26
BBS9-201ENST00000242067 KDM5BQ9UGL1 1544 aa13.41□□□□□ -0.26
BBS9-201ENST00000242067 NEUROD2Q15784 382 aa13.41□□□□□ -0.26
BBS9-201ENST00000242067 PANK3Q9H999 370 aa13.4□□□□□ -0.26
BBS9-201ENST00000242067 C8orf34Q49A92 452 aa13.39□□□□□ -0.27
BBS9-201ENST00000242067 TRIM44Q96DX7 344 aaPredicted RBP13.39□□□□□ -0.27
BBS9-201ENST00000242067 ADAMTS8Q9UP79 889 aa13.39□□□□□ -0.27
BBS9-201ENST00000242067 GOLGA2Q08379 1002 aa13.38□□□□□ -0.27
BBS9-201ENST00000242067 NCAPD3P42695 1498 aa13.38□□□□□ -0.27
BBS9-201ENST00000242067 RPRD2Q5VT52 1461 aaKnown RBP13.38□□□□□ -0.27
BBS9-201ENST00000242067 ZMYND15Q9H091 742 aa13.37□□□□□ -0.27
BBS9-201ENST00000242067 CFAP43Q8NDM7 1665 aa13.37□□□□□ -0.27
BBS9-201ENST00000242067 CADPSQ9ULU8 1353 aa13.37□□□□□ -0.27
BBS9-201ENST00000242067 KNSTRNQ9Y448 316 aa13.37□□□□□ -0.27
BBS9-201ENST00000242067 NUP155O75694 1391 aa13.36□□□□□ -0.27
BBS9-201ENST00000242067 ARID3AQ99856 593 aa13.36□□□□□ -0.27
BBS9-201ENST00000242067 COG6Q9Y2V7 657 aa13.36□□□□□ -0.27
BBS9-201ENST00000242067 PANK2Q9BZ23 570 aa13.35□□□□□ -0.27
BBS9-201ENST00000242067 SPATA31E1Q6ZUB1 1445 aa13.35□□□□□ -0.27
BBS9-201ENST00000242067 MIA2Q96PC5 1412 aa13.35□□□□□ -0.27
BBS9-201ENST00000242067 BCAR3O75815 825 aa13.35□□□□□ -0.27
BBS9-201ENST00000242067 NBPF1Q3BBV0 1214 aa13.33□□□□□ -0.28
BBS9-201ENST00000242067 SEC24BO95487 1268 aa13.33□□□□□ -0.28
BBS9-201ENST00000242067 TSPY4P0CV99 314 aa13.33□□□□□ -0.28
BBS9-201ENST00000242067 TSPY10P0CW01 314 aa13.33□□□□□ -0.28
BBS9-201ENST00000242067 CLUAP1Q96AJ1 413 aa13.33□□□□□ -0.28
BBS9-201ENST00000242067 PANK1Q8TE04 598 aa13.32□□□□□ -0.28
BBS9-201ENST00000242067 MYH16Q9H6N6 1097 aa13.32□□□□□ -0.28
BBS9-201ENST00000242067 DENND4BO75064 1496 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms