RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 UHRF1BP1LA0JNW5 1464 aa22.05■■□□□ 1.12
CTSD-201ENST00000236671 ATP10BO94823 1461 aa22.04■■□□□ 1.12
CTSD-201ENST00000236671 NAIPQ13075 1403 aa22.04■■□□□ 1.12
CTSD-201ENST00000236671 TONSLQ96HA7 1378 aa22.03■■□□□ 1.12
CTSD-201ENST00000236671 KDM5BQ9UGL1 1544 aa22.02■■□□□ 1.12
CTSD-201ENST00000236671 HECW1Q76N89 1606 aa22.01■■□□□ 1.11
CTSD-201ENST00000236671 HIRIP3Q9BW71 556 aaPredicted RBP22.01■■□□□ 1.11
CTSD-201ENST00000236671 EPRSP07814 1512 aaKnown RBP22■■□□□ 1.11
CTSD-201ENST00000236671 NPM1P06748 294 aaKnown RBP eCLIP21.98■■□□□ 1.11
CTSD-201ENST00000236671 MAGI3Q5TCQ9 1506 aa21.98■■□□□ 1.11
CTSD-201ENST00000236671 CCER2I3L3R5 266 aa21.98■■□□□ 1.11
CTSD-201ENST00000236671 ASXL2Q76L83 1435 aa21.95■■□□□ 1.1
CTSD-201ENST00000236671 TCOF1Q13428 1488 aaKnown RBP21.93■■□□□ 1.1
CTSD-201ENST00000236671 ANP32CO43423 234 aa21.92■■□□□ 1.1
CTSD-201ENST00000236671 TSHZ2Q9NRE2 1034 aa21.92■■□□□ 1.1
CTSD-201ENST00000236671 GCC2Q8IWJ2 1684 aa21.9■■□□□ 1.1
CTSD-201ENST00000236671 TRHP20396 242 aaPredicted RBP21.88■■□□□ 1.09
CTSD-201ENST00000236671 KIF13AQ9H1H9 1805 aa21.87■■□□□ 1.09
CTSD-201ENST00000236671 AKNAQ7Z591 1439 aa21.86■■□□□ 1.09
CTSD-201ENST00000236671 WDR7Q9Y4E6 1490 aa21.86■■□□□ 1.09
CTSD-201ENST00000236671 DENND4BO75064 1496 aaPredicted RBP21.85■■□□□ 1.09
CTSD-201ENST00000236671 KIF14Q15058 1648 aa21.84■■□□□ 1.09
CTSD-201ENST00000236671 FKBP8Q14318 412 aa21.83■■□□□ 1.08
CTSD-201ENST00000236671 TSPOAP1O95153 1857 aa21.82■■□□□ 1.08
CTSD-201ENST00000236671 DIP2BQ9P265 1576 aa21.82■■□□□ 1.08
CTSD-201ENST00000236671 PLEKHD1A6NEE1 506 aa21.82■■□□□ 1.08
CTSD-201ENST00000236671 FAM69CQ0P6D2 419 aa21.82■■□□□ 1.08
CTSD-201ENST00000236671 KDM6BO15054 1643 aa21.81■■□□□ 1.08
CTSD-201ENST00000236671 RRP7BPQ9NSQ0 103 aa21.8■■□□□ 1.08
CTSD-201ENST00000236671 TRIM52Q96A61 297 aa21.8■■□□□ 1.08
CTSD-201ENST00000236671 BCANQ96GW7 911 aa21.79■■□□□ 1.08
CTSD-201ENST00000236671 MIA2Q96PC5 1412 aa21.79■■□□□ 1.08
CTSD-201ENST00000236671 ABCC10Q5T3U5 1492 aa21.78■■□□□ 1.08
CTSD-201ENST00000236671 CHIC2Q9UKJ5 165 aa21.77■■□□□ 1.08
CTSD-201ENST00000236671 TTC37Q6PGP7 1564 aa21.76■■□□□ 1.07
CTSD-201ENST00000236671 TROQ12816 1431 aaPredicted RBP21.74■■□□□ 1.07
CTSD-201ENST00000236671 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.73■■□□□ 1.075e-7■■■■□ 21.6
CTSD-201ENST00000236671 CDK11AQ9UQ88 783 aaPredicted RBP21.73■■□□□ 1.07
CTSD-201ENST00000236671 NEFLP07196 543 aa21.72■■□□□ 1.07
CTSD-201ENST00000236671 WASHC2AQ641Q2 1341 aa21.7■■□□□ 1.06
CTSD-201ENST00000236671 HSPA5P11021 654 aaKnown RBP21.7■■□□□ 1.06
CTSD-201ENST00000236671 MPHOSPH9Q99550 1183 aa21.68■■□□□ 1.06
CTSD-201ENST00000236671 MAP3K4Q9Y6R4 1608 aa21.67■■□□□ 1.06
CTSD-201ENST00000236671 PPRC1Q5VV67 1664 aaKnown RBP21.67■■□□□ 1.06
CTSD-201ENST00000236671 ABCA9Q8IUA7 1624 aa21.66■■□□□ 1.06
CTSD-201ENST00000236671 ROCK1Q13464 1354 aa21.64■■□□□ 1.06
CTSD-201ENST00000236671 DAPK1P53355 1430 aa21.64■■□□□ 1.05
CTSD-201ENST00000236671 DNMT1P26358 1616 aaKnown RBP21.64■■□□□ 1.05
CTSD-201ENST00000236671 GLI2P10070 1586 aa21.63■■□□□ 1.05
CTSD-201ENST00000236671 CD109Q6YHK3 1445 aa21.63■■□□□ 1.05
CTSD-201ENST00000236671 CDC42BPAQ5VT25 1732 aa21.63■■□□□ 1.05
CTSD-201ENST00000236671 EIF4G2P78344 907 aaKnown RBP eCLIP21.62■■□□□ 1.05
CTSD-201ENST00000236671 L3MBTL2Q969R5 705 aa21.61■■□□□ 1.05
CTSD-201ENST00000236671 CDC42BPBQ9Y5S2 1711 aa21.61■■□□□ 1.05
CTSD-201ENST00000236671 CNTLNQ9NXG0 1405 aa21.61■■□□□ 1.05
CTSD-201ENST00000236671 MYO5CQ9NQX4 1742 aa21.6■■□□□ 1.05
CTSD-201ENST00000236671 ABCC5O15440 1437 aa21.6■■□□□ 1.05
CTSD-201ENST00000236671 RPRD2Q5VT52 1461 aaKnown RBP21.6■■□□□ 1.05
CTSD-201ENST00000236671 ANKRD30BQ9BXX2 1392 aa21.59■■□□□ 1.05
CTSD-201ENST00000236671 TEX14Q8IWB6 1497 aa21.59■■□□□ 1.05
CTSD-201ENST00000236671 FOXD1Q16676 465 aa21.58■■□□□ 1.05
CTSD-201ENST00000236671 NCOA1Q15788 1441 aa21.58■■□□□ 1.05
CTSD-201ENST00000236671 HNRNPUQ00839 825 aaKnown RBP eCLIP21.58■■□□□ 1.04
CTSD-201ENST00000236671 GPATCH8Q9UKJ3 1502 aaKnown RBP21.55■■□□□ 1.04
CTSD-201ENST00000236671 ZNF777Q9ULD5 760 aaPredicted RBP21.55■■□□□ 1.04
CTSD-201ENST00000236671 ZNF644Q9H582 1327 aaPredicted RBP21.54■■□□□ 1.04
CTSD-201ENST00000236671 PREX2Q70Z35 1606 aa21.54■■□□□ 1.04
CTSD-201ENST00000236671 CCDC7Q96M83 1385 aa21.54■■□□□ 1.04
CTSD-201ENST00000236671 ARHGAP5Q13017 1502 aa21.53■■□□□ 1.04
CTSD-201ENST00000236671 C11orf95C9JLR9 678 aaPredicted RBP21.52■■□□□ 1.04
CTSD-201ENST00000236671 PLCH2O75038 1416 aa21.51■■□□□ 1.03
CTSD-201ENST00000236671 ANP32EQ9BTT0 268 aa21.51■■□□□ 1.03
CTSD-201ENST00000236671 FANCAO15360 1455 aa21.51■■□□□ 1.03
CTSD-201ENST00000236671 NBPF8Q3BBV2 869 aa21.5■■□□□ 1.03
CTSD-201ENST00000236671 SPATA31E1Q6ZUB1 1445 aa21.48■■□□□ 1.03
CTSD-201ENST00000236671 COL17A1Q9UMD9 1497 aaPredicted RBP21.48■■□□□ 1.03
CTSD-201ENST00000236671 CFDP1Q9UEE9 299 aaPredicted RBP21.47■■□□□ 1.03
CTSD-201ENST00000236671 RBM19Q9Y4C8 960 aaKnown RBP21.47■■□□□ 1.03
CTSD-201ENST00000236671 POLR1AO95602 1720 aaPredicted RBP21.47■■□□□ 1.03
CTSD-201ENST00000236671 CCDC184Q52MB2 194 aa21.47■■□□□ 1.03
CTSD-201ENST00000236671 PZPP20742 1482 aa21.46■■□□□ 1.03
CTSD-201ENST00000236671 SAMD9LQ8IVG5 1584 aa21.46■■□□□ 1.03
CTSD-201ENST00000236671 ITSN2Q9NZM3 1697 aa21.46■■□□□ 1.03
CTSD-201ENST00000236671 PRKRIP1Q9H875 184 aaPredicted RBP21.46■■□□□ 1.03
CTSD-201ENST00000236671 CAMSAP2Q08AD1 1489 aa21.45■■□□□ 1.02
CTSD-201ENST00000236671 SLC4A1APQ9BWU0 796 aaKnown RBP21.45■■□□□ 1.02
CTSD-201ENST00000236671 ADGBQ8N7X0 1667 aa21.44■■□□□ 1.02
CTSD-201ENST00000236671 RAPGEF3O95398 923 aa21.43■■□□□ 1.02
CTSD-201ENST00000236671 ARHGEF12Q9NZN5 1544 aa21.43■■□□□ 1.02
CTSD-201ENST00000236671 MBD5Q9P267 1494 aa21.41■■□□□ 1.02
CTSD-201ENST00000236671 KIF7Q2M1P5 1343 aa21.41■■□□□ 1.02
CTSD-201ENST00000236671 HNRNPMP52272 730 aaKnown RBP eCLIP21.41■■□□□ 1.02
CTSD-201ENST00000236671 EFCAB2Q5VUJ9 269 aa21.41■■□□□ 1.02
CTSD-201ENST00000236671 SYCP2Q9BX26 1530 aa21.4■■□□□ 1.02
CTSD-201ENST00000236671 ADGRL1O94910 1474 aa21.4■■□□□ 1.02
CTSD-201ENST00000236671 CROCC2H7BZ55 1655 aa21.4■■□□□ 1.02
CTSD-201ENST00000236671 ADGRL2O95490 1459 aa21.39■■□□□ 1.02
CTSD-201ENST00000236671 IRX6P78412 446 aaPredicted RBP21.37■■□□□ 1.01
CTSD-201ENST00000236671 SCAPERQ9BY12 1400 aa21.37■■□□□ 1.01
CTSD-201ENST00000236671 ARAP3Q8WWN8 1544 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms