RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 ADRA2BP18089 450 aa3.84□□□□□ -1.79
PRKD3-201ENST00000234179 APLP2Q06481 763 aa3.84□□□□□ -1.8
PRKD3-201ENST00000234179 CLIP1P30622 1438 aa3.84□□□□□ -1.8
PRKD3-201ENST00000234179 FMN1Q68DA7 1419 aa3.84□□□□□ -1.8
PRKD3-201ENST00000234179 ESF1Q9H501 851 aaKnown RBP3.83□□□□□ -1.8
PRKD3-201ENST00000234179 UHRF1BP1Q6BDS2 1440 aa3.83□□□□□ -1.8
PRKD3-201ENST00000234179 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP3.83□□□□□ -1.8
PRKD3-201ENST00000234179 HNRNPUL2Q1KMD3 747 aaKnown RBP3.83□□□□□ -1.8
PRKD3-201ENST00000234179 SOCS7O14512 581 aa3.83□□□□□ -1.8
PRKD3-201ENST00000234179 CSRNP3Q8WYN3 585 aa3.83□□□□□ -1.8
PRKD3-201ENST00000234179 MADDQ8WXG6 1647 aa3.83□□□□□ -1.8
PRKD3-201ENST00000234179 AGLP35573 1532 aa3.83□□□□□ -1.8
PRKD3-201ENST00000234179 PLCH2O75038 1416 aa3.83□□□□□ -1.8
PRKD3-201ENST00000234179 ARHGEF12Q9NZN5 1544 aa3.82□□□□□ -1.8
PRKD3-201ENST00000234179 ZNF518AQ6AHZ1 1483 aa3.82□□□□□ -1.8
PRKD3-201ENST00000234179 NPATQ14207 1427 aa3.82□□□□□ -1.8
PRKD3-201ENST00000234179 FAM135AQ9P2D6 1515 aa3.82□□□□□ -1.8
PRKD3-201ENST00000234179 NUP153P49790 1475 aaKnown RBP3.82□□□□□ -1.8
PRKD3-201ENST00000234179 SETD1BQ9UPS6 1966 aaKnown RBP3.81□□□□□ -1.8
PRKD3-201ENST00000234179 PREX1Q8TCU6 1659 aa3.81□□□□□ -1.8
PRKD3-201ENST00000234179 FRMPD1Q5SYB0 1578 aa3.81□□□□□ -1.8
PRKD3-201ENST00000234179 RIMS1Q86UR5 1692 aaKnown RBP3.81□□□□□ -1.8
PRKD3-201ENST00000234179 PLEKHH2Q8IVE3 1493 aa3.81□□□□□ -1.8
PRKD3-201ENST00000234179 RAPGEF3O95398 923 aa3.81□□□□□ -1.8
PRKD3-201ENST00000234179 SCAPERQ9BY12 1400 aa3.81□□□□□ -1.8
PRKD3-201ENST00000234179 MLH3Q9UHC1 1453 aa3.81□□□□□ -1.8
PRKD3-201ENST00000234179 RICTORQ6R327 1708 aa3.8□□□□□ -1.8
PRKD3-201ENST00000234179 HECW1Q76N89 1606 aa3.8□□□□□ -1.8
PRKD3-201ENST00000234179 PKD2Q13563 968 aa3.8□□□□□ -1.8
PRKD3-201ENST00000234179 TRAPPC8Q9Y2L5 1435 aa3.8□□□□□ -1.8
PRKD3-201ENST00000234179 DISP3Q9P2K9 1392 aa3.8□□□□□ -1.8
PRKD3-201ENST00000234179 TROQ12816 1431 aaPredicted RBP3.79□□□□□ -1.8
PRKD3-201ENST00000234179 PLA2R1Q13018 1463 aa3.79□□□□□ -1.8
PRKD3-201ENST00000234179 CCDC18Q5T9S5 1454 aa3.79□□□□□ -1.8
PRKD3-201ENST00000234179 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.79□□□□□ -1.8
PRKD3-201ENST00000234179 FER1L4A9Z1Z3 1794 aa3.79□□□□□ -1.8
PRKD3-201ENST00000234179 KDM5CP41229 1560 aa3.79□□□□□ -1.8
PRKD3-201ENST00000234179 SPATA31D1Q6ZQQ2 1576 aa3.79□□□□□ -1.8
PRKD3-201ENST00000234179 KIF14Q15058 1648 aa3.79□□□□□ -1.8
PRKD3-201ENST00000234179 NCOA1Q15788 1441 aa3.78□□□□□ -1.81
PRKD3-201ENST00000234179 MYO5CQ9NQX4 1742 aa3.77□□□□□ -1.81
PRKD3-201ENST00000234179 MROH2AA6NES4 1674 aa3.77□□□□□ -1.81
PRKD3-201ENST00000234179 KIAA1107Q9UPP5 1409 aa3.77□□□□□ -1.81
PRKD3-201ENST00000234179 CPS1P31327 1500 aa3.76□□□□□ -1.81
PRKD3-201ENST00000234179 ARHGAP5Q13017 1502 aa3.76□□□□□ -1.81
PRKD3-201ENST00000234179 MYT1LQ9UL68 1186 aa3.76□□□□□ -1.81
PRKD3-201ENST00000234179 RSPH4AQ5TD94 716 aa3.76□□□□□ -1.81
PRKD3-201ENST00000234179 HSPA2P54652 639 aa3.76□□□□□ -1.81
PRKD3-201ENST00000234179 DIP2CQ9Y2E4 1556 aa3.75□□□□□ -1.81
PRKD3-201ENST00000234179 TOM1O60784 492 aa3.75□□□□□ -1.81
PRKD3-201ENST00000234179 P3H3Q8IVL6 736 aa3.75□□□□□ -1.81
PRKD3-201ENST00000234179 PTPRKQ15262 1439 aa3.75□□□□□ -1.81
PRKD3-201ENST00000234179 ABCC1P33527 1531 aa3.75□□□□□ -1.81
PRKD3-201ENST00000234179 CASKIN1Q8WXD9 1431 aa3.74□□□□□ -1.81
PRKD3-201ENST00000234179 MLECQ14165 292 aa3.74□□□□□ -1.81
PRKD3-201ENST00000234179 LTBP4Q8N2S1 1624 aa3.74□□□□□ -1.81
PRKD3-201ENST00000234179 RTEL1-TNFRSF6BF6WH68 1400 aa3.74□□□□□ -1.81
PRKD3-201ENST00000234179 A2ML1A8K2U0 1454 aa3.74□□□□□ -1.81
PRKD3-201ENST00000234179 SPAG9O60271 1321 aaKnown RBP3.74□□□□□ -1.81
PRKD3-201ENST00000234179 TCOF1Q13428 1488 aaKnown RBP3.74□□□□□ -1.81
PRKD3-201ENST00000234179 ARID3CA6NKF2 412 aa3.73□□□□□ -1.81
PRKD3-201ENST00000234179 NCBP3Q53F19 620 aaKnown RBP3.73□□□□□ -1.81
PRKD3-201ENST00000234179 ZNF142P52746 1687 aaPredicted RBP3.73□□□□□ -1.81
PRKD3-201ENST00000234179 PREX2Q70Z35 1606 aa3.73□□□□□ -1.81
PRKD3-201ENST00000234179 FYCO1Q9BQS8 1478 aa3.73□□□□□ -1.81
PRKD3-201ENST00000234179 UBAP1LF5GYI3 381 aa3.73□□□□□ -1.81
PRKD3-201ENST00000234179 HOXD11P31277 338 aaPredicted RBP3.73□□□□□ -1.81
PRKD3-201ENST00000234179 NLRP1Q9C000 1473 aa3.73□□□□□ -1.81
PRKD3-201ENST00000234179 A2MP01023 1474 aa3.72□□□□□ -1.81
PRKD3-201ENST00000234179 ZMYM3Q14202 1370 aa3.72□□□□□ -1.81
PRKD3-201ENST00000234179 THEMISQ8N1K5 641 aaPredicted RBP3.72□□□□□ -1.81
PRKD3-201ENST00000234179 CDK13Q14004 1512 aaKnown RBP3.72□□□□□ -1.81
PRKD3-201ENST00000234179 UBTFP17480 764 aaKnown RBP3.72□□□□□ -1.81
PRKD3-201ENST00000234179 ITSN2Q9NZM3 1697 aa3.72□□□□□ -1.81
PRKD3-201ENST00000234179 CAMSAP1Q5T5Y3 1602 aa3.71□□□□□ -1.81
PRKD3-201ENST00000234179 CCNB3Q8WWL7 1395 aa3.71□□□□□ -1.81
PRKD3-201ENST00000234179 STRCQ7RTU9 1775 aa3.71□□□□□ -1.82
PRKD3-201ENST00000234179 CEP170BQ9Y4F5 1589 aaPredicted RBP3.71□□□□□ -1.82
PRKD3-201ENST00000234179 C3P01024 1663 aa3.71□□□□□ -1.82
PRKD3-201ENST00000234179 ABCA6Q8N139 1617 aa3.71□□□□□ -1.82
PRKD3-201ENST00000234179 ANKLE2Q86XL3 938 aa3.71□□□□□ -1.82
PRKD3-201ENST00000234179 AFAP1Q8N556 730 aa3.71□□□□□ -1.82
PRKD3-201ENST00000234179 ATP7AQ04656 1500 aa3.71□□□□□ -1.82
PRKD3-201ENST00000234179 ARHGAP35Q9NRY4 1499 aa3.71□□□□□ -1.82
PRKD3-201ENST00000234179 TNRQ92752 1358 aa3.71□□□□□ -1.82
PRKD3-201ENST00000234179 ADGBQ8N7X0 1667 aa3.7□□□□□ -1.82
PRKD3-201ENST00000234179 PLXNC1O60486 1568 aa3.7□□□□□ -1.82
PRKD3-201ENST00000234179 SAMD9LQ8IVG5 1584 aa3.7□□□□□ -1.82
PRKD3-201ENST00000234179 CFDP1Q9UEE9 299 aaPredicted RBP3.7□□□□□ -1.82
PRKD3-201ENST00000234179 SYNMO15061 1565 aa3.7□□□□□ -1.82
PRKD3-201ENST00000234179 DHX29Q7Z478 1369 aaKnown RBP3.7□□□□□ -1.82
PRKD3-201ENST00000234179 ATP1B4Q9UN42 357 aaPredicted RBP3.7□□□□□ -1.82
PRKD3-201ENST00000234179 MED14O60244 1454 aa3.7□□□□□ -1.82
PRKD3-201ENST00000234179 PZPP20742 1482 aa3.7□□□□□ -1.82
PRKD3-201ENST00000234179 LRRC9Q6ZRR7 1453 aa3.7□□□□□ -1.82
PRKD3-201ENST00000234179 INO80Q9ULG1 1556 aaPredicted RBP3.7□□□□□ -1.82
PRKD3-201ENST00000234179 SHANK2Q9UPX8 1470 aa3.7□□□□□ -1.82
PRKD3-201ENST00000234179 CEBPAP49715 358 aaPredicted RBP3.69□□□□□ -1.82
PRKD3-201ENST00000234179 DEPDC5O75140 1603 aa3.69□□□□□ -1.82
PRKD3-201ENST00000234179 MYO3AQ8NEV4 1616 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms