RNA–Protein interactions for RNA: ENST00000233612.8

GCA-201, Transcript of grancalcin, humanhuman

TSL 2 BASIC

Gene GCA, Length 1,694 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-201ENST00000233612 ZNF644Q9H582 1327 aaPredicted RBP32.52■■■□□ 2.8
GCA-201ENST00000233612 ACIN1Q9UKV3 1341 aaKnown RBP32.52■■■□□ 2.8
GCA-201ENST00000233612 KDM5BQ9UGL1 1544 aa32.51■■■□□ 2.8
GCA-201ENST00000233612 OSCARQ8IYS5 282 aa32.5■■■□□ 2.79
GCA-201ENST00000233612 CHIC2Q9UKJ5 165 aa32.45■■■□□ 2.79
GCA-201ENST00000233612 ZCCHC11Q5TAX3 1644 aaKnown RBP32.43■■■□□ 2.78
GCA-201ENST00000233612 RRP7BPQ9NSQ0 103 aa32.43■■■□□ 2.78
GCA-201ENST00000233612 CROCC2H7BZ55 1655 aa32.39■■■□□ 2.78
GCA-201ENST00000233612 PREX2Q70Z35 1606 aa32.39■■■□□ 2.78
GCA-201ENST00000233612 ADGRL2O95490 1459 aa32.39■■■□□ 2.77
GCA-201ENST00000233612 TIMELESSQ9UNS1 1208 aa32.38■■■□□ 2.77
GCA-201ENST00000233612 CDC42BPBQ9Y5S2 1711 aa32.37■■■□□ 2.77
GCA-201ENST00000233612 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.36■■■□□ 2.77
GCA-201ENST00000233612 ADGBQ8N7X0 1667 aa32.35■■■□□ 2.77
GCA-201ENST00000233612 SHANK2Q9UPX8 1470 aa32.34■■■□□ 2.77
GCA-201ENST00000233612 ARHGEF5Q12774 1597 aa32.33■■■□□ 2.77
GCA-201ENST00000233612 NCOA1Q15788 1441 aa32.33■■■□□ 2.77
GCA-201ENST00000233612 ZNF777Q9ULD5 760 aaPredicted RBP32.33■■■□□ 2.77
GCA-201ENST00000233612 ZNF316A6NFI3 1004 aaPredicted RBP32.32■■■□□ 2.76
GCA-201ENST00000233612 KDM6BO15054 1643 aa32.32■■■□□ 2.76
GCA-201ENST00000233612 TTC37Q6PGP7 1564 aa32.3■■■□□ 2.76
GCA-201ENST00000233612 RSPH4AQ5TD94 716 aa32.29■■■□□ 2.76
GCA-201ENST00000233612 MBD5Q9P267 1494 aa32.27■■■□□ 2.76
GCA-201ENST00000233612 SAMD9LQ8IVG5 1584 aa32.26■■■□□ 2.75
GCA-201ENST00000233612 MYO5CQ9NQX4 1742 aa32.26■■■□□ 2.75
GCA-201ENST00000233612 ANKRD30AQ9BXX3 1397 aa32.24■■■□□ 2.75
GCA-201ENST00000233612 SIN3AQ96ST3 1273 aa32.21■■■□□ 2.75
GCA-201ENST00000233612 PLCH2O75038 1416 aa32.2■■■□□ 2.75
GCA-201ENST00000233612 KIAA1107Q9UPP5 1409 aa32.19■■■□□ 2.74
GCA-201ENST00000233612 DENND4BO75064 1496 aaPredicted RBP32.19■■■□□ 2.74
GCA-201ENST00000233612 PLEKHH2Q8IVE3 1493 aa32.19■■■□□ 2.74
GCA-201ENST00000233612 C9orf84Q5VXU9 1444 aa32.18■■■□□ 2.74
GCA-201ENST00000233612 ARHGAP5Q13017 1502 aa32.17■■■□□ 2.74
GCA-201ENST00000233612 TSPY4P0CV99 314 aa32.17■■■□□ 2.74
GCA-201ENST00000233612 TSPY10P0CW01 314 aa32.17■■■□□ 2.74
GCA-201ENST00000233612 CCDC141Q6ZP82 1450 aa32.16■■■□□ 2.74
GCA-201ENST00000233612 ARAP3Q8WWN8 1544 aa32.16■■■□□ 2.74
GCA-201ENST00000233612 KCNH8Q96L42 1107 aa32.15■■■□□ 2.74
GCA-201ENST00000233612 TRIM52Q96A61 297 aa32.15■■■□□ 2.74
GCA-201ENST00000233612 MPHOSPH9Q99550 1183 aa32.15■■■□□ 2.74
GCA-201ENST00000233612 WDR7Q9Y4E6 1490 aa32.14■■■□□ 2.74
GCA-201ENST00000233612 HNRNPMP52272 730 aaKnown RBP eCLIP32.14■■■□□ 2.749e-6■■■■□ 22.2
GCA-201ENST00000233612 MAST1Q9Y2H9 1570 aa32.11■■■□□ 2.73
GCA-201ENST00000233612 NEUROD1Q13562 356 aa32.1■■■□□ 2.73
GCA-201ENST00000233612 ANKRD50Q9ULJ7 1429 aa32.08■■■□□ 2.73
GCA-201ENST00000233612 EFCAB2Q5VUJ9 269 aa32.08■■■□□ 2.73
GCA-201ENST00000233612 SYCP2Q9BX26 1530 aa32.06■■■□□ 2.72
GCA-201ENST00000233612 DIEXFQ68CQ4 756 aaKnown RBP32.05■■■□□ 2.72
GCA-201ENST00000233612 PPP1R15AO75807 674 aaPredicted RBP32.03■■■□□ 2.72
GCA-201ENST00000233612 ABCA9Q8IUA7 1624 aa32.03■■■□□ 2.72
GCA-201ENST00000233612 ASXL2Q76L83 1435 aa32■■■□□ 2.71
GCA-201ENST00000233612 PZPP20742 1482 aa32■■■□□ 2.71
GCA-201ENST00000233612 KIF15Q9NS87 1388 aa31.98■■■□□ 2.71
GCA-201ENST00000233612 ARHGEF12Q9NZN5 1544 aa31.98■■■□□ 2.71
GCA-201ENST00000233612 TONSLQ96HA7 1378 aa31.97■■■□□ 2.71
GCA-201ENST00000233612 ABCC1P33527 1531 aa31.97■■■□□ 2.71
GCA-201ENST00000233612 ANKRD30BQ9BXX2 1392 aa31.97■■■□□ 2.71
GCA-201ENST00000233612 NPM1P06748 294 aaKnown RBP eCLIP31.96■■■□□ 2.71
GCA-201ENST00000233612 KDM5DQ9BY66 1539 aa31.95■■■□□ 2.7
GCA-201ENST00000233612 PLXNC1O60486 1568 aa31.94■■■□□ 2.7
GCA-201ENST00000233612 SLC4A1APQ9BWU0 796 aaKnown RBP31.94■■■□□ 2.7
GCA-201ENST00000233612 RPRD2Q5VT52 1461 aaKnown RBP31.85■■■□□ 2.69
GCA-201ENST00000233612 RTEL1-TNFRSF6BF6WH68 1400 aa31.84■■■□□ 2.69
GCA-201ENST00000233612 FANCAO15360 1455 aa31.82■■■□□ 2.68
GCA-201ENST00000233612 TRAPPC8Q9Y2L5 1435 aa31.82■■■□□ 2.68
GCA-201ENST00000233612 NUP155O75694 1391 aa31.81■■■□□ 2.68
GCA-201ENST00000233612 DUOX2Q9NRD8 1548 aa31.81■■■□□ 2.68
GCA-201ENST00000233612 FOXD1Q16676 465 aa31.8■■■□□ 2.68
GCA-201ENST00000233612 UNC13BO14795 1591 aa31.77■■■□□ 2.68
GCA-201ENST00000233612 ERBINQ96RT1 1412 aa31.76■■■□□ 2.67
GCA-201ENST00000233612 PKD2Q13563 968 aa31.74■■■□□ 2.67
GCA-201ENST00000233612 SPAG9O60271 1321 aaKnown RBP31.7■■■□□ 2.67
GCA-201ENST00000233612 ADGRL1O94910 1474 aa31.69■■■□□ 2.66
GCA-201ENST00000233612 ZFYVE16Q7Z3T8 1539 aa31.69■■■□□ 2.66
GCA-201ENST00000233612 RIMBP3CA6NJZ7 1639 aa31.68■■■□□ 2.66
GCA-201ENST00000233612 RIMBP3BA6NNM3 1639 aa31.68■■■□□ 2.66
GCA-201ENST00000233612 RIMBP3Q9UFD9 1639 aa31.68■■■□□ 2.66
GCA-201ENST00000233612 MAGI2Q86UL8 1455 aa31.68■■■□□ 2.66
GCA-201ENST00000233612 FAM135AQ9P2D6 1515 aa31.67■■■□□ 2.66
GCA-201ENST00000233612 CFAP74Q9C0B2 1584 aa31.67■■■□□ 2.66
GCA-201ENST00000233612 AFAP1Q8N556 730 aa31.67■■■□□ 2.66
GCA-201ENST00000233612 L3MBTL2Q969R5 705 aa31.67■■■□□ 2.66
GCA-201ENST00000233612 CD109Q6YHK3 1445 aa31.66■■■□□ 2.66
GCA-201ENST00000233612 SCAPERQ9BY12 1400 aa31.66■■■□□ 2.66
GCA-201ENST00000233612 TEX14Q8IWB6 1497 aa31.66■■■□□ 2.66
GCA-201ENST00000233612 INO80Q9ULG1 1556 aaPredicted RBP31.65■■■□□ 2.66
GCA-201ENST00000233612 IQGAP3Q86VI3 1631 aa31.64■■■□□ 2.65
GCA-201ENST00000233612 ATP7AQ04656 1500 aa31.6■■■□□ 2.65
GCA-201ENST00000233612 CYB5RLQ6IPT4 315 aa31.57■■■□□ 2.65
GCA-201ENST00000233612 ZNF518AQ6AHZ1 1483 aa31.54■■■□□ 2.64
GCA-201ENST00000233612 GLI2P10070 1586 aa31.54■■■□□ 2.64
GCA-201ENST00000233612 NEO1Q92859 1461 aa31.54■■■□□ 2.64
GCA-201ENST00000233612 DEPDC5O75140 1603 aa31.5■■■□□ 2.63
GCA-201ENST00000233612 ATP10AO60312 1499 aa31.49■■■□□ 2.63
GCA-201ENST00000233612 KDM5CP41229 1560 aa31.49■■■□□ 2.63
GCA-201ENST00000233612 EIF2AK4Q9P2K8 1649 aaKnown RBP31.48■■■□□ 2.63
GCA-201ENST00000233612 DHX29Q7Z478 1369 aaKnown RBP31.48■■■□□ 2.63
GCA-201ENST00000233612 MIER1Q8N108 512 aa31.48■■■□□ 2.63
GCA-201ENST00000233612 KIDINS220Q9ULH0 1771 aa31.47■■■□□ 2.63
GCA-201ENST00000233612 MAP3K4Q9Y6R4 1608 aa31.47■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms