RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 PELP1Q8IZL8 1130 aaKnown RBP20.89■□□□□ 0.93
PRKAB1-201ENST00000229328 CAMSAP2Q08AD1 1489 aa20.89■□□□□ 0.93
PRKAB1-201ENST00000229328 ITSN2Q9NZM3 1697 aa20.89■□□□□ 0.93
PRKAB1-201ENST00000229328 ZNF777Q9ULD5 760 aaPredicted RBP20.87■□□□□ 0.93
PRKAB1-201ENST00000229328 ROCK1Q13464 1354 aa20.86■□□□□ 0.93
PRKAB1-201ENST00000229328 MIER1Q8N108 512 aa20.86■□□□□ 0.93
PRKAB1-201ENST00000229328 TIMELESSQ9UNS1 1208 aa20.86■□□□□ 0.93
PRKAB1-201ENST00000229328 ABCC10Q5T3U5 1492 aa20.85■□□□□ 0.93
PRKAB1-201ENST00000229328 DENND4BO75064 1496 aaPredicted RBP20.85■□□□□ 0.93
PRKAB1-201ENST00000229328 TRIM52Q96A61 297 aa20.85■□□□□ 0.93
PRKAB1-201ENST00000229328 CDC42BPAQ5VT25 1732 aa20.82■□□□□ 0.92
PRKAB1-201ENST00000229328 PPP1R15AO75807 674 aaPredicted RBP20.81■□□□□ 0.92
PRKAB1-201ENST00000229328 CLASP1Q7Z460 1538 aa20.8■□□□□ 0.92
PRKAB1-201ENST00000229328 TONSLQ96HA7 1378 aa20.78■□□□□ 0.92
PRKAB1-201ENST00000229328 MPHOSPH9Q99550 1183 aa20.77■□□□□ 0.92
PRKAB1-201ENST00000229328 NCOA1Q15788 1441 aa20.75■□□□□ 0.91
PRKAB1-201ENST00000229328 CROCC2H7BZ55 1655 aa20.75■□□□□ 0.91
PRKAB1-201ENST00000229328 ABCC2Q92887 1545 aa20.73■□□□□ 0.91
PRKAB1-201ENST00000229328 FOXD1Q16676 465 aa20.73■□□□□ 0.91
PRKAB1-201ENST00000229328 ADGBQ8N7X0 1667 aa20.72■□□□□ 0.91
PRKAB1-201ENST00000229328 ADGRL2O95490 1459 aa20.71■□□□□ 0.91
PRKAB1-201ENST00000229328 KDM5BQ9UGL1 1544 aa20.69■□□□□ 0.9
PRKAB1-201ENST00000229328 HNRNPMP52272 730 aaKnown RBP eCLIP20.67■□□□□ 0.9
PRKAB1-201ENST00000229328 CDC42BPBQ9Y5S2 1711 aa20.67■□□□□ 0.9
PRKAB1-201ENST00000229328 ANKRD30AQ9BXX3 1397 aa20.66■□□□□ 0.9
PRKAB1-201ENST00000229328 PREX2Q70Z35 1606 aa20.66■□□□□ 0.9
PRKAB1-201ENST00000229328 C9orf84Q5VXU9 1444 aa20.65■□□□□ 0.9
PRKAB1-201ENST00000229328 TTC37Q6PGP7 1564 aa20.65■□□□□ 0.9
PRKAB1-201ENST00000229328 HIRIP3Q9BW71 556 aaPredicted RBP20.65■□□□□ 0.9
PRKAB1-201ENST00000229328 SAMD9LQ8IVG5 1584 aa20.64■□□□□ 0.9
PRKAB1-201ENST00000229328 SLC4A1APQ9BWU0 796 aaKnown RBP20.64■□□□□ 0.9
PRKAB1-201ENST00000229328 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.64■□□□□ 0.891e-17■■■□□ 18.3
PRKAB1-201ENST00000229328 ACIN1Q9UKV3 1341 aaKnown RBP20.64■□□□□ 0.89
PRKAB1-201ENST00000229328 MBD5Q9P267 1494 aa20.64■□□□□ 0.89
PRKAB1-201ENST00000229328 SHANK2Q9UPX8 1470 aa20.64■□□□□ 0.89
PRKAB1-201ENST00000229328 PZPP20742 1482 aa20.63■□□□□ 0.89
PRKAB1-201ENST00000229328 YTHDC1Q96MU7 727 aaKnown RBP20.63■□□□□ 0.89
PRKAB1-201ENST00000229328 ANKRD30BQ9BXX2 1392 aa20.63■□□□□ 0.89
PRKAB1-201ENST00000229328 ZCCHC11Q5TAX3 1644 aaKnown RBP20.61■□□□□ 0.89
PRKAB1-201ENST00000229328 KCNH8Q96L42 1107 aa20.61■□□□□ 0.89
PRKAB1-201ENST00000229328 ANKRD50Q9ULJ7 1429 aa20.6■□□□□ 0.89
PRKAB1-201ENST00000229328 ARHGEF5Q12774 1597 aa20.6■□□□□ 0.89
PRKAB1-201ENST00000229328 UHRF1BP1LA0JNW5 1464 aa20.6■□□□□ 0.89
PRKAB1-201ENST00000229328 TSPY4P0CV99 314 aa20.6■□□□□ 0.89
PRKAB1-201ENST00000229328 TSPY10P0CW01 314 aa20.6■□□□□ 0.89
PRKAB1-201ENST00000229328 CENPBP07199 599 aaPredicted RBP20.58■□□□□ 0.89
PRKAB1-201ENST00000229328 SCAF1Q9H7N4 1312 aaKnown RBP20.58■□□□□ 0.88
PRKAB1-201ENST00000229328 ARHGAP5Q13017 1502 aa20.57■□□□□ 0.88
PRKAB1-201ENST00000229328 CCDC141Q6ZP82 1450 aa20.56■□□□□ 0.88
PRKAB1-201ENST00000229328 L3MBTL2Q969R5 705 aa20.56■□□□□ 0.88
PRKAB1-201ENST00000229328 RPRD2Q5VT52 1461 aaKnown RBP20.55■□□□□ 0.88
PRKAB1-201ENST00000229328 SYCP2Q9BX26 1530 aa20.54■□□□□ 0.88
PRKAB1-201ENST00000229328 KIF15Q9NS87 1388 aa20.54■□□□□ 0.88
PRKAB1-201ENST00000229328 DDX10Q13206 875 aaKnown RBP20.54■□□□□ 0.88
PRKAB1-201ENST00000229328 MYO5CQ9NQX4 1742 aa20.53■□□□□ 0.88
PRKAB1-201ENST00000229328 PKD2Q13563 968 aa20.51■□□□□ 0.87
PRKAB1-201ENST00000229328 KIAA1107Q9UPP5 1409 aa20.5■□□□□ 0.87
PRKAB1-201ENST00000229328 RSPH4AQ5TD94 716 aa20.5■□□□□ 0.87
PRKAB1-201ENST00000229328 NUP155O75694 1391 aa20.49■□□□□ 0.87
PRKAB1-201ENST00000229328 TEX14Q8IWB6 1497 aa20.49■□□□□ 0.87
PRKAB1-201ENST00000229328 PLCH2O75038 1416 aa20.48■□□□□ 0.87
PRKAB1-201ENST00000229328 ARHGEF12Q9NZN5 1544 aa20.47■□□□□ 0.87
PRKAB1-201ENST00000229328 NBPF8Q3BBV2 869 aa20.44■□□□□ 0.86
PRKAB1-201ENST00000229328 KDM5DQ9BY66 1539 aa20.44■□□□□ 0.86
PRKAB1-201ENST00000229328 MAST1Q9Y2H9 1570 aa20.44■□□□□ 0.86
PRKAB1-201ENST00000229328 PLEKHH2Q8IVE3 1493 aa20.43■□□□□ 0.86
PRKAB1-201ENST00000229328 HSPA5P11021 654 aaKnown RBP20.42■□□□□ 0.86
PRKAB1-201ENST00000229328 EFCAB2Q5VUJ9 269 aa20.42■□□□□ 0.86
PRKAB1-201ENST00000229328 OSCARQ8IYS5 282 aa20.42■□□□□ 0.86
PRKAB1-201ENST00000229328 WDR7Q9Y4E6 1490 aa20.39■□□□□ 0.86
PRKAB1-201ENST00000229328 ABCC1P33527 1531 aa20.38■□□□□ 0.85
PRKAB1-201ENST00000229328 TRAPPC8Q9Y2L5 1435 aa20.36■□□□□ 0.85
PRKAB1-201ENST00000229328 PLXNC1O60486 1568 aa20.36■□□□□ 0.85
PRKAB1-201ENST00000229328 EIF4G2P78344 907 aaKnown RBP eCLIP20.36■□□□□ 0.85
PRKAB1-201ENST00000229328 FAM135AQ9P2D6 1515 aa20.35■□□□□ 0.85
PRKAB1-201ENST00000229328 GTF3C3Q9Y5Q9 886 aa20.34■□□□□ 0.85
PRKAB1-201ENST00000229328 WASHC2AQ641Q2 1341 aa20.32■□□□□ 0.84
PRKAB1-201ENST00000229328 UNC13BO14795 1591 aa20.31■□□□□ 0.84
PRKAB1-201ENST00000229328 ASXL2Q76L83 1435 aa20.31■□□□□ 0.84
PRKAB1-201ENST00000229328 ARAP3Q8WWN8 1544 aa20.31■□□□□ 0.84
PRKAB1-201ENST00000229328 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.31■□□□□ 0.84
PRKAB1-201ENST00000229328 DUOX2Q9NRD8 1548 aa20.3■□□□□ 0.84
PRKAB1-201ENST00000229328 AFAP1Q8N556 730 aa20.3■□□□□ 0.84
PRKAB1-201ENST00000229328 ABCA9Q8IUA7 1624 aa20.29■□□□□ 0.84
PRKAB1-201ENST00000229328 C11orf95C9JLR9 678 aaPredicted RBP20.28■□□□□ 0.84
PRKAB1-201ENST00000229328 ZNF326Q5BKZ1 582 aaKnown RBP20.27■□□□□ 0.84
PRKAB1-201ENST00000229328 FANCAO15360 1455 aa20.27■□□□□ 0.83
PRKAB1-201ENST00000229328 SPATA31E1Q6ZUB1 1445 aa20.26■□□□□ 0.83
PRKAB1-201ENST00000229328 SPAG9O60271 1321 aaKnown RBP20.26■□□□□ 0.83
PRKAB1-201ENST00000229328 ERBINQ96RT1 1412 aa20.26■□□□□ 0.83
PRKAB1-201ENST00000229328 ANP32CO43423 234 aa20.25■□□□□ 0.83
PRKAB1-201ENST00000229328 IQGAP3Q86VI3 1631 aa20.24■□□□□ 0.83
PRKAB1-201ENST00000229328 ZFYVE16Q7Z3T8 1539 aa20.23■□□□□ 0.83
PRKAB1-201ENST00000229328 PLA2R1Q13018 1463 aa20.22■□□□□ 0.83
PRKAB1-201ENST00000229328 MAGI2Q86UL8 1455 aa20.22■□□□□ 0.83
PRKAB1-201ENST00000229328 RTEL1-TNFRSF6BF6WH68 1400 aa20.21■□□□□ 0.83
PRKAB1-201ENST00000229328 UHRF1BP1Q6BDS2 1440 aa20.21■□□□□ 0.83
PRKAB1-201ENST00000229328 NPM1P06748 294 aaKnown RBP eCLIP20.21■□□□□ 0.83
PRKAB1-201ENST00000229328 MYT1Q01538 1121 aa20.2■□□□□ 0.82
PRKAB1-201ENST00000229328 CCDC7Q96M83 1385 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms