RNA–Protein interactions for RNA: ENST00000222690.10

H2AFV-201, Transcript of H2A histone family member V, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene H2AFV, Length 3,804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-201ENST00000222690 UGGT2Q9NYU1 1516 aa23.37■■□□□ 1.33
H2AFV-201ENST00000222690 ERICH6BQ5W0A0 696 aa23.36■■□□□ 1.33
H2AFV-201ENST00000222690 KDM6BO15054 1643 aa23.36■■□□□ 1.33
H2AFV-201ENST00000222690 SALL2Q9Y467 1007 aaPredicted RBP23.35■■□□□ 1.33
H2AFV-201ENST00000222690 DENND4BO75064 1496 aaPredicted RBP23.34■■□□□ 1.33
H2AFV-201ENST00000222690 LRRIQ1Q96JM4 1722 aa23.32■■□□□ 1.32
H2AFV-201ENST00000222690 NCOA1Q15788 1441 aa23.32■■□□□ 1.32
H2AFV-201ENST00000222690 KDM2AQ9Y2K7 1162 aa23.31■■□□□ 1.32
H2AFV-201ENST00000222690 TMC1Q8TDI8 760 aa23.31■■□□□ 1.32
H2AFV-201ENST00000222690 SAMD9Q5K651 1589 aa23.3■■□□□ 1.32
H2AFV-201ENST00000222690 EPRSP07814 1512 aaKnown RBP23.3■■□□□ 1.32
H2AFV-201ENST00000222690 AKNAQ7Z591 1439 aa23.29■■□□□ 1.32
H2AFV-201ENST00000222690 CFDP1Q9UEE9 299 aaPredicted RBP23.28■■□□□ 1.32
H2AFV-201ENST00000222690 ANKRD30BQ9BXX2 1392 aa23.28■■□□□ 1.32
H2AFV-201ENST00000222690 PDS5BQ9NTI5 1447 aa23.27■■□□□ 1.32
H2AFV-201ENST00000222690 PKD2Q13563 968 aa23.25■■□□□ 1.31
H2AFV-201ENST00000222690 FBLN2P98095 1184 aa23.24■■□□□ 1.31
H2AFV-201ENST00000222690 NOP58Q9Y2X3 529 aaKnown RBP23.23■■□□□ 1.31
H2AFV-201ENST00000222690 MIA2Q96PC5 1412 aa23.22■■□□□ 1.31
H2AFV-201ENST00000222690 NUDCQ9Y266 331 aa23.22■■□□□ 1.31
H2AFV-201ENST00000222690 TCOF1Q13428 1488 aaKnown RBP23.22■■□□□ 1.31
H2AFV-201ENST00000222690 THOC2Q8NI27 1593 aaKnown RBP23.21■■□□□ 1.31
H2AFV-201ENST00000222690 DAPK1P53355 1430 aa23.21■■□□□ 1.31
H2AFV-201ENST00000222690 NPM2Q86SE8 214 aaKnown RBP23.21■■□□□ 1.31
H2AFV-201ENST00000222690 HECW1Q76N89 1606 aa23.21■■□□□ 1.31
H2AFV-201ENST00000222690 RPRD2Q5VT52 1461 aaKnown RBP23.2■■□□□ 1.3
H2AFV-201ENST00000222690 ANP32AP39687 249 aaKnown RBP23.2■■□□□ 1.3
H2AFV-201ENST00000222690 USP47Q96K76 1375 aa23.2■■□□□ 1.3
H2AFV-201ENST00000222690 CARD11Q9BXL7 1154 aa23.2■■□□□ 1.3
H2AFV-201ENST00000222690 LAMC3Q9Y6N6 1575 aa23.19■■□□□ 1.3
H2AFV-201ENST00000222690 PAK3O75914 559 aaPredicted RBP23.19■■□□□ 1.3
H2AFV-201ENST00000222690 DEKP35659 375 aaKnown RBP23.19■■□□□ 1.3
H2AFV-201ENST00000222690 ABCA5Q8WWZ7 1642 aa23.18■■□□□ 1.3
H2AFV-201ENST00000222690 ABCC5O15440 1437 aa23.17■■□□□ 1.3
H2AFV-201ENST00000222690 ARHGEF11O15085 1522 aa23.16■■□□□ 1.3
H2AFV-201ENST00000222690 GCC2Q8IWJ2 1684 aa23.15■■□□□ 1.3
H2AFV-201ENST00000222690 IQGAP2Q13576 1575 aa23.13■■□□□ 1.29
H2AFV-201ENST00000222690 TEX14Q8IWB6 1497 aa23.11■■□□□ 1.29
H2AFV-201ENST00000222690 RTL5Q5HYW3 569 aaPredicted RBP23.09■■□□□ 1.29
H2AFV-201ENST00000222690 DCAF11Q8TEB1 546 aa23.09■■□□□ 1.29
H2AFV-201ENST00000222690 ZBTB47Q9UFB7 747 aaPredicted RBP23.09■■□□□ 1.29
H2AFV-201ENST00000222690 ST20-MTHFSA0A0A6YYL1 179 aa23.09■■□□□ 1.29
H2AFV-201ENST00000222690 SPATA31E1Q6ZUB1 1445 aa23.08■■□□□ 1.29
H2AFV-201ENST00000222690 ROCK1Q13464 1354 aa23.08■■□□□ 1.29
H2AFV-201ENST00000222690 PRG4Q92954 1404 aaPredicted RBP23.07■■□□□ 1.28
H2AFV-201ENST00000222690 SMG6Q86US8 1419 aaKnown RBP23.07■■□□□ 1.28
H2AFV-201ENST00000222690 PNISRQ8TF01 805 aaKnown RBP23.06■■□□□ 1.28
H2AFV-201ENST00000222690 NUP155O75694 1391 aa23.05■■□□□ 1.28
H2AFV-201ENST00000222690 RGL3Q3MIN7 710 aa23.05■■□□□ 1.28
H2AFV-201ENST00000222690 DHX29Q7Z478 1369 aaKnown RBP23.05■■□□□ 1.28
H2AFV-201ENST00000222690 WDR62O43379 1518 aa23.03■■□□□ 1.28
H2AFV-201ENST00000222690 CHMP7Q8WUX9 453 aaPredicted RBP23.02■■□□□ 1.28
H2AFV-201ENST00000222690 MYT1LQ9UL68 1186 aa23.02■■□□□ 1.28
H2AFV-201ENST00000222690 TSPY4P0CV99 314 aa23.01■■□□□ 1.27
H2AFV-201ENST00000222690 TSPY10P0CW01 314 aa23.01■■□□□ 1.27
H2AFV-201ENST00000222690 IPO9Q96P70 1041 aaKnown RBP23.01■■□□□ 1.27
H2AFV-201ENST00000222690 EXOC6Q8TAG9 804 aa23■■□□□ 1.27
H2AFV-201ENST00000222690 KIAA1107Q9UPP5 1409 aa22.99■■□□□ 1.27
H2AFV-201ENST00000222690 ANKRD30AQ9BXX3 1397 aa22.98■■□□□ 1.27
H2AFV-201ENST00000222690 PZPP20742 1482 aa22.96■■□□□ 1.27
H2AFV-201ENST00000222690 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.96■■□□□ 1.273e-6■□□□□ 11.3
H2AFV-201ENST00000222690 NUP153P49790 1475 aaKnown RBP22.96■■□□□ 1.27
H2AFV-201ENST00000222690 PLEKHD1A6NEE1 506 aa22.96■■□□□ 1.27
H2AFV-201ENST00000222690 KIF21AQ7Z4S6 1674 aa22.95■■□□□ 1.26
H2AFV-201ENST00000222690 CC2D1BQ5T0F9 858 aaKnown RBP22.95■■□□□ 1.26
H2AFV-201ENST00000222690 RCAN3Q9UKA8 241 aa22.95■■□□□ 1.26
H2AFV-201ENST00000222690 ANKRD50Q9ULJ7 1429 aa22.94■■□□□ 1.26
H2AFV-201ENST00000222690 KIF15Q9NS87 1388 aa22.94■■□□□ 1.26
H2AFV-201ENST00000222690 ZNF608Q9ULD9 1512 aaPredicted RBP22.94■■□□□ 1.26
H2AFV-201ENST00000222690 CAMSAP2Q08AD1 1489 aa22.94■■□□□ 1.26
H2AFV-201ENST00000222690 LAS1LQ9Y4W2 734 aaKnown RBP22.93■■□□□ 1.26
H2AFV-201ENST00000222690 HNRNPMP52272 730 aaKnown RBP eCLIP22.93■■□□□ 1.263e-6■□□□□ 11
H2AFV-201ENST00000222690 DNMT1P26358 1616 aaKnown RBP22.93■■□□□ 1.26
H2AFV-201ENST00000222690 TARBP1Q13395 1621 aaKnown RBP22.92■■□□□ 1.26
H2AFV-201ENST00000222690 RRP1P56182 461 aaKnown RBP22.92■■□□□ 1.26
H2AFV-201ENST00000222690 MYBBP1AQ9BQG0 1328 aaKnown RBP22.92■■□□□ 1.26
H2AFV-201ENST00000222690 PLIN1O60240 522 aa22.91■■□□□ 1.26
H2AFV-201ENST00000222690 ROCK2O75116 1388 aaKnown RBP22.91■■□□□ 1.26
H2AFV-201ENST00000222690 PLB1Q6P1J6 1458 aa22.9■■□□□ 1.26
H2AFV-201ENST00000222690 TROQ12816 1431 aaPredicted RBP22.89■■□□□ 1.26
H2AFV-201ENST00000222690 CDCA7LQ96GN5 454 aa22.89■■□□□ 1.26
H2AFV-201ENST00000222690 RALBP1Q15311 655 aa22.88■■□□□ 1.25
H2AFV-201ENST00000222690 ADAMTS12P58397 1594 aa22.88■■□□□ 1.25
H2AFV-201ENST00000222690 BCORL1Q5H9F3 1711 aa22.86■■□□□ 1.25
H2AFV-201ENST00000222690 PBRM1Q86U86 1689 aa22.86■■□□□ 1.25
H2AFV-201ENST00000222690 RNF123Q5XPI4 1314 aa22.86■■□□□ 1.25
H2AFV-201ENST00000222690 SKAP1Q86WV1 359 aa22.86■■□□□ 1.25
H2AFV-201ENST00000222690 ARID4BQ4LE39 1312 aaPredicted RBP22.85■■□□□ 1.25
H2AFV-201ENST00000222690 DISP1Q96F81 1524 aa22.85■■□□□ 1.25
H2AFV-201ENST00000222690 KIAA0586Q9BVV6 1533 aa22.85■■□□□ 1.25
H2AFV-201ENST00000222690 GPATCH8Q9UKJ3 1502 aaKnown RBP22.84■■□□□ 1.25
H2AFV-201ENST00000222690 NLRP13Q86W25 1043 aa22.84■■□□□ 1.25
H2AFV-201ENST00000222690 NBPF1Q3BBV0 1214 aa22.83■■□□□ 1.24
H2AFV-201ENST00000222690 KTN1Q86UP2 1357 aaKnown RBP22.82■■□□□ 1.24
H2AFV-201ENST00000222690 JPH4Q96JJ6 628 aa22.82■■□□□ 1.24
H2AFV-201ENST00000222690 PDE4AP27815 886 aa22.81■■□□□ 1.24
H2AFV-201ENST00000222690 BRD4O60885 1362 aaPredicted RBP22.81■■□□□ 1.24
H2AFV-201ENST00000222690 KIAA0556O60303 1618 aa22.8■■□□□ 1.24
H2AFV-201ENST00000222690 RAPGEF6Q8TEU7 1601 aa22.8■■□□□ 1.24
H2AFV-201ENST00000222690 NEFMP07197 916 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms