RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 DNAJC5Q9H3Z4 198 aa29.73■■■□□ 2.35
CCDC130-201ENST00000221554 MPHOSPH9Q99550 1183 aa29.71■■■□□ 2.35
CCDC130-201ENST00000221554 ITSN2Q9NZM3 1697 aa29.71■■■□□ 2.35
CCDC130-201ENST00000221554 ABCC5O15440 1437 aa29.71■■■□□ 2.35
CCDC130-201ENST00000221554 ERCC6L2Q5T890 1561 aa29.7■■■□□ 2.35
CCDC130-201ENST00000221554 KDM5BQ9UGL1 1544 aa29.7■■■□□ 2.34
CCDC130-201ENST00000221554 ADCY10Q96PN6 1610 aa29.69■■■□□ 2.34
CCDC130-201ENST00000221554 JPH4Q96JJ6 628 aa29.69■■■□□ 2.34
CCDC130-201ENST00000221554 ANP32CO43423 234 aa29.67■■■□□ 2.34
CCDC130-201ENST00000221554 DENND4BO75064 1496 aaPredicted RBP29.67■■■□□ 2.34
CCDC130-201ENST00000221554 ARID3CA6NKF2 412 aa29.66■■■□□ 2.34
CCDC130-201ENST00000221554 KDM6BO15054 1643 aa29.66■■■□□ 2.34
CCDC130-201ENST00000221554 RIMBP3CA6NJZ7 1639 aa29.65■■■□□ 2.34
CCDC130-201ENST00000221554 RIMBP3BA6NNM3 1639 aa29.65■■■□□ 2.34
CCDC130-201ENST00000221554 RIMBP3Q9UFD9 1639 aa29.65■■■□□ 2.34
CCDC130-201ENST00000221554 PRG4Q92954 1404 aaPredicted RBP29.61■■■□□ 2.33
CCDC130-201ENST00000221554 CFDP1Q9UEE9 299 aaPredicted RBP29.59■■■□□ 2.33
CCDC130-201ENST00000221554 PLB1Q6P1J6 1458 aa29.59■■■□□ 2.33
CCDC130-201ENST00000221554 CAMSAP2Q08AD1 1489 aa29.57■■■□□ 2.32
CCDC130-201ENST00000221554 GPATCH8Q9UKJ3 1502 aaKnown RBP29.57■■■□□ 2.32
CCDC130-201ENST00000221554 ADGBQ8N7X0 1667 aa29.55■■■□□ 2.32
CCDC130-201ENST00000221554 ANKRD30BQ9BXX2 1392 aa29.55■■■□□ 2.32
CCDC130-201ENST00000221554 ADGRL2O95490 1459 aa29.54■■■□□ 2.32
CCDC130-201ENST00000221554 HIRIP3Q9BW71 556 aaPredicted RBP29.54■■■□□ 2.32
CCDC130-201ENST00000221554 ABCA8O94911 1581 aa29.53■■■□□ 2.32
CCDC130-201ENST00000221554 RPRD2Q5VT52 1461 aaKnown RBP29.52■■■□□ 2.32
CCDC130-201ENST00000221554 ZNF644Q9H582 1327 aaPredicted RBP29.51■■■□□ 2.32
CCDC130-201ENST00000221554 EIF4G2P78344 907 aaKnown RBP eCLIP29.5■■■□□ 2.31
CCDC130-201ENST00000221554 PLEKHD1A6NEE1 506 aa29.49■■■□□ 2.31
CCDC130-201ENST00000221554 NCOA1Q15788 1441 aa29.49■■■□□ 2.31
CCDC130-201ENST00000221554 KCNH8Q96L42 1107 aa29.49■■■□□ 2.31
CCDC130-201ENST00000221554 CROCC2H7BZ55 1655 aa29.47■■■□□ 2.31
CCDC130-201ENST00000221554 KIF14Q15058 1648 aa29.45■■■□□ 2.31
CCDC130-201ENST00000221554 ANKRD30AQ9BXX3 1397 aa29.45■■■□□ 2.31
CCDC130-201ENST00000221554 L3MBTL2Q969R5 705 aa29.45■■■□□ 2.31
CCDC130-201ENST00000221554 SLC4A1APQ9BWU0 796 aaKnown RBP29.45■■■□□ 2.31
CCDC130-201ENST00000221554 SUPT16HQ9Y5B9 1047 aaKnown RBP29.45■■■□□ 2.31
CCDC130-201ENST00000221554 HSPA5P11021 654 aaKnown RBP29.43■■■□□ 2.3
CCDC130-201ENST00000221554 SHANK2Q9UPX8 1470 aa29.41■■■□□ 2.3
CCDC130-201ENST00000221554 ATP10BO94823 1461 aa29.4■■■□□ 2.3
CCDC130-201ENST00000221554 ABCC10Q5T3U5 1492 aa29.38■■■□□ 2.29
CCDC130-201ENST00000221554 TEX14Q8IWB6 1497 aa29.38■■■□□ 2.29
CCDC130-201ENST00000221554 PZPP20742 1482 aa29.37■■■□□ 2.29
CCDC130-201ENST00000221554 CDC42BPAQ5VT25 1732 aa29.34■■■□□ 2.29
CCDC130-201ENST00000221554 KIAA1107Q9UPP5 1409 aa29.33■■■□□ 2.29
CCDC130-201ENST00000221554 CYB5RLQ6IPT4 315 aa29.33■■■□□ 2.29
CCDC130-201ENST00000221554 ZNF777Q9ULD5 760 aaPredicted RBP29.33■■■□□ 2.29
CCDC130-201ENST00000221554 FOXD1Q16676 465 aa29.32■■■□□ 2.28
CCDC130-201ENST00000221554 WASHC2AQ641Q2 1341 aa29.32■■■□□ 2.28
CCDC130-201ENST00000221554 PTPRGP23470 1445 aa29.31■■■□□ 2.28
CCDC130-201ENST00000221554 ANKRD50Q9ULJ7 1429 aa29.29■■■□□ 2.28
CCDC130-201ENST00000221554 ARHGEF5Q12774 1597 aa29.27■■■□□ 2.28
CCDC130-201ENST00000221554 CNTLNQ9NXG0 1405 aa29.27■■■□□ 2.28
CCDC130-201ENST00000221554 RSPH4AQ5TD94 716 aa29.26■■■□□ 2.28
CCDC130-201ENST00000221554 TSPY4P0CV99 314 aa29.26■■■□□ 2.27
CCDC130-201ENST00000221554 TSPY10P0CW01 314 aa29.26■■■□□ 2.27
CCDC130-201ENST00000221554 C9orf84Q5VXU9 1444 aa29.25■■■□□ 2.27
CCDC130-201ENST00000221554 CCDC7Q96M83 1385 aa29.23■■■□□ 2.27
CCDC130-201ENST00000221554 KDM5DQ9BY66 1539 aa29.22■■■□□ 2.27
CCDC130-201ENST00000221554 NBPF8Q3BBV2 869 aa29.21■■■□□ 2.27
CCDC130-201ENST00000221554 SPATA31E1Q6ZUB1 1445 aa29.21■■■□□ 2.27
CCDC130-201ENST00000221554 POLR1AO95602 1720 aaPredicted RBP29.2■■■□□ 2.26
CCDC130-201ENST00000221554 MBD5Q9P267 1494 aa29.18■■■□□ 2.26
CCDC130-201ENST00000221554 PKD2Q13563 968 aa29.17■■■□□ 2.26
CCDC130-201ENST00000221554 NEFLP07196 543 aa29.16■■■□□ 2.26
CCDC130-201ENST00000221554 PREX2Q70Z35 1606 aa29.12■■■□□ 2.25
CCDC130-201ENST00000221554 NUP155O75694 1391 aa29.12■■■□□ 2.25
CCDC130-201ENST00000221554 CCDC141Q6ZP82 1450 aa29.11■■■□□ 2.25
CCDC130-201ENST00000221554 ARID4BQ4LE39 1312 aaPredicted RBP29.11■■■□□ 2.25
CCDC130-201ENST00000221554 ARHGEF12Q9NZN5 1544 aa29.1■■■□□ 2.25
CCDC130-201ENST00000221554 UHRF1BP1Q6BDS2 1440 aa29.1■■■□□ 2.25
CCDC130-201ENST00000221554 KIF15Q9NS87 1388 aa29.09■■■□□ 2.25
CCDC130-201ENST00000221554 ABCC2Q92887 1545 aa29.08■■■□□ 2.25
CCDC130-201ENST00000221554 C11orf95C9JLR9 678 aaPredicted RBP29.05■■■□□ 2.24
CCDC130-201ENST00000221554 CDC42BPBQ9Y5S2 1711 aa29.05■■■□□ 2.24
CCDC130-201ENST00000221554 SAMD9LQ8IVG5 1584 aa29.05■■■□□ 2.24
CCDC130-201ENST00000221554 FKBP8Q14318 412 aa29.04■■■□□ 2.24
CCDC130-201ENST00000221554 PRKRIP1Q9H875 184 aaPredicted RBP29.04■■■□□ 2.24
CCDC130-201ENST00000221554 KIF7Q2M1P5 1343 aa29.04■■■□□ 2.24
CCDC130-201ENST00000221554 HNRNPMP52272 730 aaKnown RBP eCLIP29.03■■■□□ 2.24
CCDC130-201ENST00000221554 UHRF1BP1LA0JNW5 1464 aa29.03■■■□□ 2.24
CCDC130-201ENST00000221554 PLEKHH2Q8IVE3 1493 aa29.03■■■□□ 2.24
CCDC130-201ENST00000221554 MAST1Q9Y2H9 1570 aa29.03■■■□□ 2.24
CCDC130-201ENST00000221554 RALGAPBQ86X10 1494 aa28.99■■■□□ 2.23
CCDC130-201ENST00000221554 HNRNPUQ00839 825 aaKnown RBP eCLIP28.98■■■□□ 2.23
CCDC130-201ENST00000221554 USP47Q96K76 1375 aa28.98■■■□□ 2.23
CCDC130-201ENST00000221554 ZCCHC11Q5TAX3 1644 aaKnown RBP28.98■■■□□ 2.23
CCDC130-201ENST00000221554 ROCK2O75116 1388 aaKnown RBP28.95■■■□□ 2.22
CCDC130-201ENST00000221554 KDM5CP41229 1560 aa28.94■■■□□ 2.22
CCDC130-201ENST00000221554 ARHGAP5Q13017 1502 aa28.93■■■□□ 2.22
CCDC130-201ENST00000221554 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.92■■■□□ 2.22
CCDC130-201ENST00000221554 FAM135AQ9P2D6 1515 aa28.9■■■□□ 2.22
CCDC130-201ENST00000221554 MYO5CQ9NQX4 1742 aa28.9■■■□□ 2.22
CCDC130-201ENST00000221554 PLXNC1O60486 1568 aa28.89■■■□□ 2.22
CCDC130-201ENST00000221554 UNC13BO14795 1591 aa28.88■■■□□ 2.21
CCDC130-201ENST00000221554 TTC37Q6PGP7 1564 aa28.88■■■□□ 2.21
CCDC130-201ENST00000221554 SYCP2Q9BX26 1530 aa28.87■■■□□ 2.21
CCDC130-201ENST00000221554 MYT1Q01538 1121 aa28.86■■■□□ 2.21
CCDC130-201ENST00000221554 MRS2Q9HD23 443 aa28.86■■■□□ 2.21
CCDC130-201ENST00000221554 ERICH6BQ5W0A0 696 aa28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms