RNA–Protein interactions for RNA: ENST00000219252.9

POLR2C-201, Transcript of RNA polymerase II subunit C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2C, Length 2,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2C-201ENST00000219252 ATP10BO94823 1461 aa26.56■■□□□ 1.84
POLR2C-201ENST00000219252 ROCK1Q13464 1354 aa26.53■■□□□ 1.84
POLR2C-201ENST00000219252 CAMSAP2Q08AD1 1489 aa26.53■■□□□ 1.84
POLR2C-201ENST00000219252 CENPBP07199 599 aaPredicted RBP26.53■■□□□ 1.84
POLR2C-201ENST00000219252 ITSN2Q9NZM3 1697 aa26.52■■□□□ 1.84
POLR2C-201ENST00000219252 CFDP1Q9UEE9 299 aaPredicted RBP26.51■■□□□ 1.83
POLR2C-201ENST00000219252 TONSLQ96HA7 1378 aa26.51■■□□□ 1.83
POLR2C-201ENST00000219252 TRIM52Q96A61 297 aa26.5■■□□□ 1.83
POLR2C-201ENST00000219252 YTHDC1Q96MU7 727 aaKnown RBP26.5■■□□□ 1.83
POLR2C-201ENST00000219252 PTPRGP23470 1445 aa26.49■■□□□ 1.83
POLR2C-201ENST00000219252 PLEKHD1A6NEE1 506 aa26.46■■□□□ 1.83
POLR2C-201ENST00000219252 ABCC10Q5T3U5 1492 aa26.45■■□□□ 1.82
POLR2C-201ENST00000219252 KDM5BQ9UGL1 1544 aa26.45■■□□□ 1.82
POLR2C-201ENST00000219252 SHROOM2Q13796 1616 aa26.44■■□□□ 1.82
POLR2C-201ENST00000219252 MPHOSPH9Q99550 1183 aa26.44■■□□□ 1.82
POLR2C-201ENST00000219252 ZNF777Q9ULD5 760 aaPredicted RBP26.43■■□□□ 1.82
POLR2C-201ENST00000219252 CDC42BPAQ5VT25 1732 aa26.41■■□□□ 1.82
POLR2C-201ENST00000219252 ERCC6L2Q5T890 1561 aa26.38■■□□□ 1.81
POLR2C-201ENST00000219252 NCOA1Q15788 1441 aa26.37■■□□□ 1.81
POLR2C-201ENST00000219252 FOXD1Q16676 465 aa26.37■■□□□ 1.81
POLR2C-201ENST00000219252 HIRIP3Q9BW71 556 aaPredicted RBP26.37■■□□□ 1.81
POLR2C-201ENST00000219252 CROCC2H7BZ55 1655 aa26.37■■□□□ 1.81
POLR2C-201ENST00000219252 ADGBQ8N7X0 1667 aa26.34■■□□□ 1.81
POLR2C-201ENST00000219252 ADGRL2O95490 1459 aa26.34■■□□□ 1.81
POLR2C-201ENST00000219252 ANKRD30BQ9BXX2 1392 aa26.28■■□□□ 1.8
POLR2C-201ENST00000219252 DDX10Q13206 875 aaKnown RBP26.27■■□□□ 1.8
POLR2C-201ENST00000219252 GTF3C3Q9Y5Q9 886 aa26.26■■□□□ 1.79
POLR2C-201ENST00000219252 PZPP20742 1482 aa26.26■■□□□ 1.79
POLR2C-201ENST00000219252 CLASP1Q7Z460 1538 aa26.25■■□□□ 1.79
POLR2C-201ENST00000219252 ANKRD30AQ9BXX3 1397 aa26.24■■□□□ 1.79
POLR2C-201ENST00000219252 SLC4A1APQ9BWU0 796 aaKnown RBP26.24■■□□□ 1.79
POLR2C-201ENST00000219252 SHANK2Q9UPX8 1470 aa26.22■■□□□ 1.79
POLR2C-201ENST00000219252 ABCC2Q92887 1545 aa26.22■■□□□ 1.79
POLR2C-201ENST00000219252 C9orf84Q5VXU9 1444 aa26.22■■□□□ 1.79
POLR2C-201ENST00000219252 RPRD2Q5VT52 1461 aaKnown RBP26.2■■□□□ 1.78
POLR2C-201ENST00000219252 L3MBTL2Q969R5 705 aa26.2■■□□□ 1.78
POLR2C-201ENST00000219252 CDC42BPBQ9Y5S2 1711 aa26.2■■□□□ 1.78
POLR2C-201ENST00000219252 MBD5Q9P267 1494 aa26.19■■□□□ 1.78
POLR2C-201ENST00000219252 PREX2Q70Z35 1606 aa26.19■■□□□ 1.78
POLR2C-201ENST00000219252 HNRNPMP52272 730 aaKnown RBP eCLIP26.19■■□□□ 1.78
POLR2C-201ENST00000219252 ANKRD50Q9ULJ7 1429 aa26.19■■□□□ 1.78
POLR2C-201ENST00000219252 SAMD9LQ8IVG5 1584 aa26.18■■□□□ 1.78
POLR2C-201ENST00000219252 ARHGEF5Q12774 1597 aa26.16■■□□□ 1.78
POLR2C-201ENST00000219252 TTC37Q6PGP7 1564 aa26.16■■□□□ 1.78
POLR2C-201ENST00000219252 TEX14Q8IWB6 1497 aa26.15■■□□□ 1.78
POLR2C-201ENST00000219252 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.14■■□□□ 1.78
POLR2C-201ENST00000219252 KCNH8Q96L42 1107 aa26.13■■□□□ 1.77
POLR2C-201ENST00000219252 TSPY4P0CV99 314 aa26.11■■□□□ 1.77
POLR2C-201ENST00000219252 TSPY10P0CW01 314 aa26.11■■□□□ 1.77
POLR2C-201ENST00000219252 KIAA1107Q9UPP5 1409 aa26.09■■□□□ 1.77
POLR2C-201ENST00000219252 CCDC141Q6ZP82 1450 aa26.08■■□□□ 1.77
POLR2C-201ENST00000219252 KIF15Q9NS87 1388 aa26.08■■□□□ 1.77
POLR2C-201ENST00000219252 HSPA5P11021 654 aaKnown RBP26.07■■□□□ 1.76
POLR2C-201ENST00000219252 PKD2Q13563 968 aa26.07■■□□□ 1.76
POLR2C-201ENST00000219252 NBPF8Q3BBV2 869 aa26.06■■□□□ 1.76
POLR2C-201ENST00000219252 ARHGAP5Q13017 1502 aa26.06■■□□□ 1.76
POLR2C-201ENST00000219252 ZCCHC11Q5TAX3 1644 aaKnown RBP26.05■■□□□ 1.76
POLR2C-201ENST00000219252 SYCP2Q9BX26 1530 aa26.05■■□□□ 1.76
POLR2C-201ENST00000219252 UHRF1BP1LA0JNW5 1464 aa26.05■■□□□ 1.76
POLR2C-201ENST00000219252 NUP155O75694 1391 aa26.03■■□□□ 1.76
POLR2C-201ENST00000219252 KDM5DQ9BY66 1539 aa26.01■■□□□ 1.75
POLR2C-201ENST00000219252 MYO5CQ9NQX4 1742 aa26.01■■□□□ 1.75
POLR2C-201ENST00000219252 RSPH4AQ5TD94 716 aa25.99■■□□□ 1.75
POLR2C-201ENST00000219252 EIF4G2P78344 907 aaKnown RBP eCLIP25.99■■□□□ 1.75
POLR2C-201ENST00000219252 WASHC2AQ641Q2 1341 aa25.97■■□□□ 1.75
POLR2C-201ENST00000219252 ARHGEF12Q9NZN5 1544 aa25.95■■□□□ 1.74
POLR2C-201ENST00000219252 MAST1Q9Y2H9 1570 aa25.95■■□□□ 1.74
POLR2C-201ENST00000219252 PLCH2O75038 1416 aa25.93■■□□□ 1.74
POLR2C-201ENST00000219252 ANP32CO43423 234 aa25.92■■□□□ 1.74
POLR2C-201ENST00000219252 PLEKHH2Q8IVE3 1493 aa25.9■■□□□ 1.74
POLR2C-201ENST00000219252 C11orf95C9JLR9 678 aaPredicted RBP25.89■■□□□ 1.73
POLR2C-201ENST00000219252 SPATA31E1Q6ZUB1 1445 aa25.88■■□□□ 1.73
POLR2C-201ENST00000219252 CCER2I3L3R5 266 aa25.87■■□□□ 1.73
POLR2C-201ENST00000219252 FAM135AQ9P2D6 1515 aa25.87■■□□□ 1.73
POLR2C-201ENST00000219252 PLXNC1O60486 1568 aa25.85■■□□□ 1.73
POLR2C-201ENST00000219252 EFCAB2Q5VUJ9 269 aa25.83■■□□□ 1.72
POLR2C-201ENST00000219252 ABCC1P33527 1531 aa25.83■■□□□ 1.72
POLR2C-201ENST00000219252 UNC13BO14795 1591 aa25.82■■□□□ 1.72
POLR2C-201ENST00000219252 CCDC7Q96M83 1385 aa25.8■■□□□ 1.72
POLR2C-201ENST00000219252 TRAPPC8Q9Y2L5 1435 aa25.8■■□□□ 1.72
POLR2C-201ENST00000219252 ZNF326Q5BKZ1 582 aaKnown RBP25.79■■□□□ 1.72
POLR2C-201ENST00000219252 WDR7Q9Y4E6 1490 aa25.77■■□□□ 1.72
POLR2C-201ENST00000219252 UHRF1BP1Q6BDS2 1440 aa25.76■■□□□ 1.71
POLR2C-201ENST00000219252 DUOX2Q9NRD8 1548 aa25.76■■□□□ 1.71
POLR2C-201ENST00000219252 CNTLNQ9NXG0 1405 aa25.76■■□□□ 1.71
POLR2C-201ENST00000219252 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.74■■□□□ 1.718e-8■■□□□ 12.4
POLR2C-201ENST00000219252 ARAP3Q8WWN8 1544 aa25.73■■□□□ 1.71
POLR2C-201ENST00000219252 KIF7Q2M1P5 1343 aa25.73■■□□□ 1.71
POLR2C-201ENST00000219252 PLA2R1Q13018 1463 aa25.72■■□□□ 1.71
POLR2C-201ENST00000219252 IQGAP3Q86VI3 1631 aa25.72■■□□□ 1.71
POLR2C-201ENST00000219252 ERBINQ96RT1 1412 aa25.71■■□□□ 1.71
POLR2C-201ENST00000219252 USP47Q96K76 1375 aa25.71■■□□□ 1.71
POLR2C-201ENST00000219252 MAGI2Q86UL8 1455 aa25.7■■□□□ 1.7
POLR2C-201ENST00000219252 RALGAPBQ86X10 1494 aa25.7■■□□□ 1.7
POLR2C-201ENST00000219252 POLR1AO95602 1720 aaPredicted RBP25.69■■□□□ 1.7
POLR2C-201ENST00000219252 KDM5CP41229 1560 aa25.69■■□□□ 1.7
POLR2C-201ENST00000219252 AFAP1Q8N556 730 aa25.68■■□□□ 1.7
POLR2C-201ENST00000219252 KDM2AQ9Y2K7 1162 aa25.67■■□□□ 1.7
POLR2C-201ENST00000219252 DCAF11Q8TEB1 546 aa25.67■■□□□ 1.7
POLR2C-201ENST00000219252 BCORL1Q5H9F3 1711 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms