RNA–Protein interactions for RNA: ENST00000217244.7

CSNK2A1-201, Transcript of casein kinase 2 alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK2A1, Length 4,416 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-201ENST00000217244 KIF3BO15066 747 aa11.64□□□□□ -0.55
CSNK2A1-201ENST00000217244 PLEKHG5O94827 1062 aa11.63□□□□□ -0.55
CSNK2A1-201ENST00000217244 EFCAB2Q5VUJ9 269 aa11.62□□□□□ -0.55
CSNK2A1-201ENST00000217244 ST20-MTHFSA0A0A6YYL1 179 aa11.62□□□□□ -0.55
CSNK2A1-201ENST00000217244 ESF1Q9H501 851 aaKnown RBP11.62□□□□□ -0.55
CSNK2A1-201ENST00000217244 LAMC3Q9Y6N6 1575 aa11.61□□□□□ -0.55
CSNK2A1-201ENST00000217244 PLB1Q6P1J6 1458 aa11.61□□□□□ -0.55
CSNK2A1-201ENST00000217244 NPM2Q86SE8 214 aaKnown RBP11.61□□□□□ -0.55
CSNK2A1-201ENST00000217244 AFAP1Q8N556 730 aa11.61□□□□□ -0.55
CSNK2A1-201ENST00000217244 NBPF8Q3BBV2 869 aa11.6□□□□□ -0.55
CSNK2A1-201ENST00000217244 NEUROD2Q15784 382 aa11.59□□□□□ -0.55
CSNK2A1-201ENST00000217244 CYB5RLQ6IPT4 315 aa11.59□□□□□ -0.55
CSNK2A1-201ENST00000217244 B4GALNT3Q6L9W6 998 aa11.59□□□□□ -0.55
CSNK2A1-201ENST00000217244 UACAQ9BZF9 1416 aa11.59□□□□□ -0.55
CSNK2A1-201ENST00000217244 PTPRKQ15262 1439 aa11.58□□□□□ -0.56
CSNK2A1-201ENST00000217244 WDR97A6NE52 1622 aa11.58□□□□□ -0.56
CSNK2A1-201ENST00000217244 IFT140Q96RY7 1462 aa11.58□□□□□ -0.56
CSNK2A1-201ENST00000217244 SPAG9O60271 1321 aaKnown RBP11.57□□□□□ -0.56
CSNK2A1-201ENST00000217244 CANXP27824 592 aaKnown RBP11.57□□□□□ -0.56
CSNK2A1-201ENST00000217244 CCDC136Q96JN2 1154 aa11.57□□□□□ -0.56
CSNK2A1-201ENST00000217244 ROCK2O75116 1388 aaKnown RBP11.57□□□□□ -0.56
CSNK2A1-201ENST00000217244 EPRSP07814 1512 aaKnown RBP11.57□□□□□ -0.56
CSNK2A1-201ENST00000217244 WDR43Q15061 677 aaKnown RBP eCLIP11.56□□□□□ -0.56
CSNK2A1-201ENST00000217244 WASHC2AQ641Q2 1341 aa11.56□□□□□ -0.56
CSNK2A1-201ENST00000217244 NAIPQ13075 1403 aa11.56□□□□□ -0.56
CSNK2A1-201ENST00000217244 STK26Q9P289 416 aa11.56□□□□□ -0.56
CSNK2A1-201ENST00000217244 EFCAB5A4FU69 1503 aa11.56□□□□□ -0.56
CSNK2A1-201ENST00000217244 SLC24A1O60721 1099 aa11.56□□□□□ -0.56
CSNK2A1-201ENST00000217244 CCDC184Q52MB2 194 aa11.55□□□□□ -0.56
CSNK2A1-201ENST00000217244 ARID4BQ4LE39 1312 aaPredicted RBP11.55□□□□□ -0.56
CSNK2A1-201ENST00000217244 KNSTRNQ9Y448 316 aa11.55□□□□□ -0.56
CSNK2A1-201ENST00000217244 KIF15Q9NS87 1388 aa11.54□□□□□ -0.56
CSNK2A1-201ENST00000217244 CCER2I3L3R5 266 aa11.54□□□□□ -0.56
CSNK2A1-201ENST00000217244 PPM1GO15355 546 aaPredicted RBP11.53□□□□□ -0.56
CSNK2A1-201ENST00000217244 IQGAP2Q13576 1575 aa11.52□□□□□ -0.56
CSNK2A1-201ENST00000217244 C11orf95C9JLR9 678 aaPredicted RBP11.52□□□□□ -0.56
CSNK2A1-201ENST00000217244 HFM1A2PYH4 1435 aa11.52□□□□□ -0.57
CSNK2A1-201ENST00000217244 ANKRD50Q9ULJ7 1429 aa11.52□□□□□ -0.57
CSNK2A1-201ENST00000217244 NBPF1Q3BBV0 1214 aa11.51□□□□□ -0.57
CSNK2A1-201ENST00000217244 PRKRIP1Q9H875 184 aaPredicted RBP11.51□□□□□ -0.57
CSNK2A1-201ENST00000217244 KIAA0586Q9BVV6 1533 aa11.51□□□□□ -0.57
CSNK2A1-201ENST00000217244 KIF7Q2M1P5 1343 aa11.5□□□□□ -0.57
CSNK2A1-201ENST00000217244 USP47Q96K76 1375 aa11.5□□□□□ -0.57
CSNK2A1-201ENST00000217244 GRIN2AQ12879 1464 aa11.5□□□□□ -0.57
CSNK2A1-201ENST00000217244 DAXXQ9UER7 740 aaPredicted RBP11.5□□□□□ -0.57
CSNK2A1-201ENST00000217244 TMF1P82094 1093 aa11.49□□□□□ -0.57
CSNK2A1-201ENST00000217244 ARHGEF11O15085 1522 aa11.49□□□□□ -0.57
CSNK2A1-201ENST00000217244 TROQ12816 1431 aaPredicted RBP11.49□□□□□ -0.57
CSNK2A1-201ENST00000217244 THOC2Q8NI27 1593 aaKnown RBP11.48□□□□□ -0.57
CSNK2A1-201ENST00000217244 KIF21AQ7Z4S6 1674 aa11.48□□□□□ -0.57
CSNK2A1-201ENST00000217244 EHBP1L1Q8N3D4 1523 aa11.48□□□□□ -0.57
CSNK2A1-201ENST00000217244 TRAK1Q9UPV9 953 aa11.48□□□□□ -0.57
CSNK2A1-201ENST00000217244 CUL7Q14999 1698 aa11.47□□□□□ -0.57
CSNK2A1-201ENST00000217244 OSCARQ8IYS5 282 aa11.47□□□□□ -0.57
CSNK2A1-201ENST00000217244 CCDC144AA2RUR9 1427 aa11.47□□□□□ -0.57
CSNK2A1-201ENST00000217244 DAPK1P53355 1430 aa11.47□□□□□ -0.57
CSNK2A1-201ENST00000217244 SOX12O15370 315 aa11.46□□□□□ -0.58
CSNK2A1-201ENST00000217244 PANK3Q9H999 370 aa11.45□□□□□ -0.58
CSNK2A1-201ENST00000217244 WASHC2CQ9Y4E1 1318 aa11.45□□□□□ -0.58
CSNK2A1-201ENST00000217244 ABCC5O15440 1437 aa11.45□□□□□ -0.58
CSNK2A1-201ENST00000217244 MAPKBP1O60336 1514 aa11.45□□□□□ -0.58
CSNK2A1-201ENST00000217244 POGKQ9P215 609 aa11.44□□□□□ -0.58
CSNK2A1-201ENST00000217244 KANK1Q14678 1352 aa11.44□□□□□ -0.58
CSNK2A1-201ENST00000217244 CCDC7Q96M83 1385 aa11.44□□□□□ -0.58
CSNK2A1-201ENST00000217244 CCDC146Q8IYE0 955 aa11.44□□□□□ -0.58
CSNK2A1-201ENST00000217244 SUPT6HQ7KZ85 1726 aaKnown RBP11.43□□□□□ -0.58
CSNK2A1-201ENST00000217244 HECW1Q76N89 1606 aa11.43□□□□□ -0.58
CSNK2A1-201ENST00000217244 C9orf84Q5VXU9 1444 aa11.43□□□□□ -0.58
CSNK2A1-201ENST00000217244 SYNJ2O15056 1496 aa11.43□□□□□ -0.58
CSNK2A1-201ENST00000217244 RSPH4AQ5TD94 716 aa11.42□□□□□ -0.58
CSNK2A1-201ENST00000217244 TRHP20396 242 aaPredicted RBP11.42□□□□□ -0.58
CSNK2A1-201ENST00000217244 SRPK2P78362 688 aaKnown RBP11.42□□□□□ -0.58
CSNK2A1-201ENST00000217244 PTPN23Q9H3S7 1636 aa11.42□□□□□ -0.58
CSNK2A1-201ENST00000217244 ARHGAP5Q13017 1502 aa11.42□□□□□ -0.58
CSNK2A1-201ENST00000217244 NUTM2FA1L443 756 aa11.42□□□□□ -0.58
CSNK2A1-201ENST00000217244 MIA2Q96PC5 1412 aa11.41□□□□□ -0.58
CSNK2A1-201ENST00000217244 RAPGEF3O95398 923 aa11.41□□□□□ -0.58
CSNK2A1-201ENST00000217244 TMEM132EQ6IEE7 984 aa11.41□□□□□ -0.58
CSNK2A1-201ENST00000217244 ZBTB7CA1YPR0 619 aa11.4□□□□□ -0.58
CSNK2A1-201ENST00000217244 U2SURPO15042 1029 aaKnown RBP11.4□□□□□ -0.58
CSNK2A1-201ENST00000217244 NEFMP07197 916 aa11.39□□□□□ -0.59
CSNK2A1-201ENST00000217244 NBR1Q14596 966 aa11.39□□□□□ -0.59
CSNK2A1-201ENST00000217244 TSHZ2Q9NRE2 1034 aa11.39□□□□□ -0.59
CSNK2A1-201ENST00000217244 NUP153P49790 1475 aaKnown RBP11.39□□□□□ -0.59
CSNK2A1-201ENST00000217244 MAP3K1Q13233 1512 aa11.39□□□□□ -0.59
CSNK2A1-201ENST00000217244 KTN1Q86UP2 1357 aaKnown RBP11.38□□□□□ -0.59
CSNK2A1-201ENST00000217244 C14orf37Q86TY3 774 aa11.38□□□□□ -0.59
CSNK2A1-201ENST00000217244 FRAT1Q92837 279 aaPredicted RBP11.38□□□□□ -0.59
CSNK2A1-201ENST00000217244 CDCA8Q53HL2 280 aa11.38□□□□□ -0.59
CSNK2A1-201ENST00000217244 CFAP70Q5T0N1 1121 aa11.38□□□□□ -0.59
CSNK2A1-201ENST00000217244 PLIN1O60240 522 aa11.38□□□□□ -0.59
CSNK2A1-201ENST00000217244 CAMSAP2Q08AD1 1489 aa11.37□□□□□ -0.59
CSNK2A1-201ENST00000217244 SCAPERQ9BY12 1400 aa11.37□□□□□ -0.59
CSNK2A1-201ENST00000217244 PPP4R2Q9NY27 417 aa11.37□□□□□ -0.59
CSNK2A1-201ENST00000217244 LAS1LQ9Y4W2 734 aaKnown RBP11.37□□□□□ -0.59
CSNK2A1-201ENST00000217244 ANKRD30BQ9BXX2 1392 aa11.37□□□□□ -0.59
CSNK2A1-201ENST00000217244 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.36□□□□□ -0.59
CSNK2A1-201ENST00000217244 MAGI1Q96QZ7 1491 aaPredicted RBP11.36□□□□□ -0.59
CSNK2A1-201ENST00000217244 RRP7AQ9Y3A4 280 aaKnown RBP11.36□□□□□ -0.59
CSNK2A1-201ENST00000217244 MORC1Q86VD1 984 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms