RNA–Protein interactions for RNA: ENST00000216297.6

SUPT16H-201, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT16H, Length 4,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-201ENST00000216297 MYH16Q9H6N6 1097 aa11.33□□□□□ -0.6
SUPT16H-201ENST00000216297 CANXP27824 592 aaKnown RBP11.33□□□□□ -0.6
SUPT16H-201ENST00000216297 FHAD1B1AJZ9 1412 aa11.32□□□□□ -0.6
SUPT16H-201ENST00000216297 PHLDB1Q86UU1 1377 aa11.32□□□□□ -0.6
SUPT16H-201ENST00000216297 CUX2O14529 1486 aa11.31□□□□□ -0.6
SUPT16H-201ENST00000216297 AMER1Q5JTC6 1135 aaPredicted RBP11.31□□□□□ -0.6
SUPT16H-201ENST00000216297 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.3□□□□□ -0.6
SUPT16H-201ENST00000216297 KIF7Q2M1P5 1343 aa11.3□□□□□ -0.6
SUPT16H-201ENST00000216297 SMARCA2P51531 1590 aa11.29□□□□□ -0.6
SUPT16H-201ENST00000216297 MTUS2Q5JR59 1369 aa11.28□□□□□ -0.6
SUPT16H-201ENST00000216297 FAM13BQ9NYF5 915 aa11.27□□□□□ -0.61
SUPT16H-201ENST00000216297 CDCA7LQ96GN5 454 aa11.26□□□□□ -0.61
SUPT16H-201ENST00000216297 RBM10P98175 930 aaKnown RBP11.26□□□□□ -0.61
SUPT16H-201ENST00000216297 CENPQQ7L2Z9 268 aaPredicted RBP11.26□□□□□ -0.61
SUPT16H-201ENST00000216297 EIF4G1Q04637 1599 aaKnown RBP11.26□□□□□ -0.61
SUPT16H-201ENST00000216297 CCDC18Q5T9S5 1454 aa11.25□□□□□ -0.61
SUPT16H-201ENST00000216297 ARHGAP35Q9NRY4 1499 aa11.25□□□□□ -0.61
SUPT16H-201ENST00000216297 SLC4A1APQ9BWU0 796 aaKnown RBP11.25□□□□□ -0.61
SUPT16H-201ENST00000216297 SLC24A1O60721 1099 aa11.24□□□□□ -0.61
SUPT16H-201ENST00000216297 MSNP26038 577 aaKnown RBP11.24□□□□□ -0.61
SUPT16H-201ENST00000216297 PNISRQ8TF01 805 aaKnown RBP11.24□□□□□ -0.61
SUPT16H-201ENST00000216297 ARID3CA6NKF2 412 aa11.24□□□□□ -0.61
SUPT16H-201ENST00000216297 TNNT2P45379 298 aaPredicted RBP11.24□□□□□ -0.61
SUPT16H-201ENST00000216297 PANK2Q9BZ23 570 aa11.24□□□□□ -0.61
SUPT16H-201ENST00000216297 CLCN1P35523 988 aa11.24□□□□□ -0.61
SUPT16H-201ENST00000216297 KDM2AQ9Y2K7 1162 aa11.24□□□□□ -0.61
SUPT16H-201ENST00000216297 ESPNB1AK53 854 aa11.23□□□□□ -0.61
SUPT16H-201ENST00000216297 KIF27Q86VH2 1401 aa11.23□□□□□ -0.61
SUPT16H-201ENST00000216297 KTN1Q86UP2 1357 aaKnown RBP11.23□□□□□ -0.61
SUPT16H-201ENST00000216297 PDE3BQ13370 1112 aa11.23□□□□□ -0.61
SUPT16H-201ENST00000216297 XRCC6P12956 609 aaKnown RBP eCLIP11.22□□□□□ -0.61
SUPT16H-201ENST00000216297 MPHOSPH9Q99550 1183 aa11.22□□□□□ -0.61
SUPT16H-201ENST00000216297 RNF123Q5XPI4 1314 aa11.22□□□□□ -0.61
SUPT16H-201ENST00000216297 SYNJ1O43426 1573 aa11.22□□□□□ -0.61
SUPT16H-201ENST00000216297 CC2D1BQ5T0F9 858 aaKnown RBP11.21□□□□□ -0.62
SUPT16H-201ENST00000216297 UACAQ9BZF9 1416 aa11.21□□□□□ -0.62
SUPT16H-201ENST00000216297 TPM2P07951 284 aa11.2□□□□□ -0.62
SUPT16H-201ENST00000216297 PDCL3Q9H2J4 239 aa11.2□□□□□ -0.62
SUPT16H-201ENST00000216297 MRE11P49959 708 aa11.2□□□□□ -0.62
SUPT16H-201ENST00000216297 FMN1Q68DA7 1419 aa11.2□□□□□ -0.62
SUPT16H-201ENST00000216297 ZBTB7CA1YPR0 619 aa11.2□□□□□ -0.62
SUPT16H-201ENST00000216297 CARD11Q9BXL7 1154 aa11.2□□□□□ -0.62
SUPT16H-201ENST00000216297 KIAA1211Q6ZU35 1233 aa11.2□□□□□ -0.62
SUPT16H-201ENST00000216297 WDR43Q15061 677 aaKnown RBP eCLIP11.19□□□□□ -0.62
SUPT16H-201ENST00000216297 LRRC9Q6ZRR7 1453 aa11.19□□□□□ -0.62
SUPT16H-201ENST00000216297 NCLP19338 710 aaKnown RBP11.18□□□□□ -0.62
SUPT16H-201ENST00000216297 TRAK2O60296 914 aa11.18□□□□□ -0.62
SUPT16H-201ENST00000216297 NBPF8Q3BBV2 869 aa11.18□□□□□ -0.62
SUPT16H-201ENST00000216297 C20orf194Q5TEA3 1177 aa11.17□□□□□ -0.62
SUPT16H-201ENST00000216297 RALBP1Q15311 655 aa11.17□□□□□ -0.62
SUPT16H-201ENST00000216297 MYBBP1AQ9BQG0 1328 aaKnown RBP11.17□□□□□ -0.62
SUPT16H-201ENST00000216297 DNTTIP2Q5QJE6 756 aaKnown RBP11.16□□□□□ -0.62
SUPT16H-201ENST00000216297 GRPEL1Q9HAV7 217 aa11.15□□□□□ -0.62
SUPT16H-201ENST00000216297 R3HCC1Q9Y3T6 440 aaKnown RBP11.15□□□□□ -0.62
SUPT16H-201ENST00000216297 NLRP13Q86W25 1043 aa11.15□□□□□ -0.62
SUPT16H-201ENST00000216297 PDE4CQ08493 712 aa11.15□□□□□ -0.63
SUPT16H-201ENST00000216297 C8orf34Q49A92 452 aa11.15□□□□□ -0.63
SUPT16H-201ENST00000216297 PRDM10Q9NQV6 1147 aa11.14□□□□□ -0.63
SUPT16H-201ENST00000216297 ZHX1Q9UKY1 873 aaPredicted RBP11.14□□□□□ -0.63
SUPT16H-201ENST00000216297 NCOA1Q15788 1441 aa11.14□□□□□ -0.63
SUPT16H-201ENST00000216297 MCM4P33991 863 aa11.14□□□□□ -0.63
SUPT16H-201ENST00000216297 HSCBQ8IWL3 235 aa11.14□□□□□ -0.63
SUPT16H-201ENST00000216297 KIF15Q9NS87 1388 aa11.12□□□□□ -0.63
SUPT16H-201ENST00000216297 GOLGA6L22H0YM25 854 aa11.12□□□□□ -0.63
SUPT16H-201ENST00000216297 MFAP1P55081 439 aaKnown RBP11.11□□□□□ -0.63
SUPT16H-201ENST00000216297 PRXQ9BXM0 1461 aa11.11□□□□□ -0.63
SUPT16H-201ENST00000216297 DDX11L8A8MPP1 907 aa11.11□□□□□ -0.63
SUPT16H-201ENST00000216297 CHMP5Q9NZZ3 219 aa11.11□□□□□ -0.63
SUPT16H-201ENST00000216297 HSP90AB1P08238 724 aaKnown RBP11.11□□□□□ -0.63
SUPT16H-201ENST00000216297 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.11□□□□□ -0.63
SUPT16H-201ENST00000216297 USP47Q96K76 1375 aa11.1□□□□□ -0.63
SUPT16H-201ENST00000216297 PTMAP06454 111 aaKnown RBP11.1□□□□□ -0.63
SUPT16H-201ENST00000216297 CDK11BP21127 795 aaKnown RBP11.1□□□□□ -0.63
SUPT16H-201ENST00000216297 SMARCA4P51532 1647 aa11.1□□□□□ -0.63
SUPT16H-201ENST00000216297 FOXD4L1Q9NU39 408 aa11.1□□□□□ -0.63
SUPT16H-201ENST00000216297 CALD1Q05682 793 aaKnown RBP11.09□□□□□ -0.63
SUPT16H-201ENST00000216297 TIAM1Q13009 1591 aa11.09□□□□□ -0.63
SUPT16H-201ENST00000216297 GBP4Q96PP9 640 aa11.09□□□□□ -0.63
SUPT16H-201ENST00000216297 MAP7D2Q96T17 732 aa11.09□□□□□ -0.63
SUPT16H-201ENST00000216297 ERICH3Q5RHP9 1530 aa11.09□□□□□ -0.63
SUPT16H-201ENST00000216297 MAP3K1Q13233 1512 aa11.08□□□□□ -0.64
SUPT16H-201ENST00000216297 FGD6Q6ZV73 1430 aa11.08□□□□□ -0.64
SUPT16H-201ENST00000216297 ST20-MTHFSA0A0A6YYL1 179 aa11.08□□□□□ -0.64
SUPT16H-201ENST00000216297 NCAPD3P42695 1498 aa11.08□□□□□ -0.64
SUPT16H-201ENST00000216297 NCOA2Q15596 1464 aa11.08□□□□□ -0.64
SUPT16H-201ENST00000216297 CARMIL1Q5VZK9 1371 aa11.08□□□□□ -0.64
SUPT16H-201ENST00000216297 FHOD3Q2V2M9 1422 aa11.08□□□□□ -0.64
SUPT16H-201ENST00000216297 BRD4O60885 1362 aaPredicted RBP11.08□□□□□ -0.64
SUPT16H-201ENST00000216297 GOLGA2Q08379 1002 aa11.08□□□□□ -0.64
SUPT16H-201ENST00000216297 AAMPQ13685 434 aa11.08□□□□□ -0.64
SUPT16H-201ENST00000216297 PEG3Q9GZU2 1588 aa11.07□□□□□ -0.64
SUPT16H-201ENST00000216297 MAPK8IP3Q9UPT6 1336 aa11.07□□□□□ -0.64
SUPT16H-201ENST00000216297 ZNF777Q9ULD5 760 aaPredicted RBP11.06□□□□□ -0.64
SUPT16H-201ENST00000216297 HFM1A2PYH4 1435 aa11.06□□□□□ -0.64
SUPT16H-201ENST00000216297 ROCK2O75116 1388 aaKnown RBP11.06□□□□□ -0.64
SUPT16H-201ENST00000216297 NASPP49321 788 aaPredicted RBP11.06□□□□□ -0.64
SUPT16H-201ENST00000216297 BBXQ8WY36 941 aaPredicted RBP11.06□□□□□ -0.64
SUPT16H-201ENST00000216297 TBC1D2Q9BYX2 928 aa11.06□□□□□ -0.64
SUPT16H-201ENST00000216297 COG6Q9Y2V7 657 aa11.05□□□□□ -0.64
SUPT16H-201ENST00000216297 UQCRHLA0A096LP55 91 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms