RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 TONSLQ96HA7 1378 aa11.49□□□□□ -0.57
HMGXB4-201ENST00000216106 CENPBP07199 599 aaPredicted RBP11.49□□□□□ -0.57
HMGXB4-201ENST00000216106 TRIM52Q96A61 297 aa11.49□□□□□ -0.57
HMGXB4-201ENST00000216106 GPATCH8Q9UKJ3 1502 aaKnown RBP11.49□□□□□ -0.57
HMGXB4-201ENST00000216106 ATP10BO94823 1461 aa11.49□□□□□ -0.57
HMGXB4-201ENST00000216106 CFDP1Q9UEE9 299 aaPredicted RBP11.49□□□□□ -0.57
HMGXB4-201ENST00000216106 DENND4BO75064 1496 aaPredicted RBP11.48□□□□□ -0.57
HMGXB4-201ENST00000216106 PPP1R15AO75807 674 aaPredicted RBP11.47□□□□□ -0.57
HMGXB4-201ENST00000216106 PTPRGP23470 1445 aa11.47□□□□□ -0.57
HMGXB4-201ENST00000216106 ZNF777Q9ULD5 760 aaPredicted RBP11.47□□□□□ -0.57
HMGXB4-201ENST00000216106 ROCK1Q13464 1354 aa11.47□□□□□ -0.57
HMGXB4-201ENST00000216106 PLEKHD1A6NEE1 506 aa11.46□□□□□ -0.57
HMGXB4-201ENST00000216106 CDC42BPAQ5VT25 1732 aa11.46□□□□□ -0.57
HMGXB4-201ENST00000216106 SHROOM2Q13796 1616 aa11.45□□□□□ -0.58
HMGXB4-201ENST00000216106 CROCC2H7BZ55 1655 aa11.44□□□□□ -0.58
HMGXB4-201ENST00000216106 ADGBQ8N7X0 1667 aa11.44□□□□□ -0.58
HMGXB4-201ENST00000216106 ABCC10Q5T3U5 1492 aa11.43□□□□□ -0.58
HMGXB4-201ENST00000216106 MPHOSPH9Q99550 1183 aa11.43□□□□□ -0.58
HMGXB4-201ENST00000216106 ERCC6L2Q5T890 1561 aa11.43□□□□□ -0.58
HMGXB4-201ENST00000216106 HIRIP3Q9BW71 556 aaPredicted RBP11.42□□□□□ -0.58
HMGXB4-201ENST00000216106 FOXD1Q16676 465 aa11.42□□□□□ -0.58
HMGXB4-201ENST00000216106 KDM5BQ9UGL1 1544 aa11.41□□□□□ -0.58
HMGXB4-201ENST00000216106 NCOA1Q15788 1441 aa11.4□□□□□ -0.58
HMGXB4-201ENST00000216106 ADGRL2O95490 1459 aa11.39□□□□□ -0.59
HMGXB4-201ENST00000216106 DDX10Q13206 875 aaKnown RBP11.37□□□□□ -0.59
HMGXB4-201ENST00000216106 SLC4A1APQ9BWU0 796 aaKnown RBP11.37□□□□□ -0.59
HMGXB4-201ENST00000216106 CDC42BPBQ9Y5S2 1711 aa11.37□□□□□ -0.59
HMGXB4-201ENST00000216106 ANKRD30AQ9BXX3 1397 aa11.36□□□□□ -0.59
HMGXB4-201ENST00000216106 CLASP1Q7Z460 1538 aa11.36□□□□□ -0.59
HMGXB4-201ENST00000216106 ABCC2Q92887 1545 aa11.36□□□□□ -0.59
HMGXB4-201ENST00000216106 PREX2Q70Z35 1606 aa11.36□□□□□ -0.59
HMGXB4-201ENST00000216106 GTF3C3Q9Y5Q9 886 aa11.36□□□□□ -0.59
HMGXB4-201ENST00000216106 C9orf84Q5VXU9 1444 aa11.35□□□□□ -0.59
HMGXB4-201ENST00000216106 ANKRD30BQ9BXX2 1392 aa11.35□□□□□ -0.59
HMGXB4-201ENST00000216106 PZPP20742 1482 aa11.35□□□□□ -0.59
HMGXB4-201ENST00000216106 SHANK2Q9UPX8 1470 aa11.35□□□□□ -0.59
HMGXB4-201ENST00000216106 TTC37Q6PGP7 1564 aa11.34□□□□□ -0.59
HMGXB4-201ENST00000216106 SAMD9LQ8IVG5 1584 aa11.34□□□□□ -0.59
HMGXB4-201ENST00000216106 HNRNPMP52272 730 aaKnown RBP eCLIP11.34□□□□□ -0.59
HMGXB4-201ENST00000216106 ANKRD50Q9ULJ7 1429 aa11.34□□□□□ -0.59
HMGXB4-201ENST00000216106 RPRD2Q5VT52 1461 aaKnown RBP11.33□□□□□ -0.6
HMGXB4-201ENST00000216106 L3MBTL2Q969R5 705 aa11.33□□□□□ -0.6
HMGXB4-201ENST00000216106 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.32□□□□□ -0.6
HMGXB4-201ENST00000216106 ARHGEF5Q12774 1597 aa11.32□□□□□ -0.6
HMGXB4-201ENST00000216106 TSPY4P0CV99 314 aa11.32□□□□□ -0.6
HMGXB4-201ENST00000216106 TSPY10P0CW01 314 aa11.32□□□□□ -0.6
HMGXB4-201ENST00000216106 MBD5Q9P267 1494 aa11.32□□□□□ -0.6
HMGXB4-201ENST00000216106 ARHGAP5Q13017 1502 aa11.31□□□□□ -0.6
HMGXB4-201ENST00000216106 ZCCHC11Q5TAX3 1644 aaKnown RBP11.31□□□□□ -0.6
HMGXB4-201ENST00000216106 TEX14Q8IWB6 1497 aa11.3□□□□□ -0.6
HMGXB4-201ENST00000216106 MYO5CQ9NQX4 1742 aa11.3□□□□□ -0.6
HMGXB4-201ENST00000216106 CCDC141Q6ZP82 1450 aa11.3□□□□□ -0.6
HMGXB4-201ENST00000216106 SYCP2Q9BX26 1530 aa11.3□□□□□ -0.6
HMGXB4-201ENST00000216106 KIF15Q9NS87 1388 aa11.3□□□□□ -0.6
HMGXB4-201ENST00000216106 KCNH8Q96L42 1107 aa11.29□□□□□ -0.6
HMGXB4-201ENST00000216106 KIAA1107Q9UPP5 1409 aa11.29□□□□□ -0.6
HMGXB4-201ENST00000216106 PKD2Q13563 968 aa11.28□□□□□ -0.6
HMGXB4-201ENST00000216106 NUP155O75694 1391 aa11.27□□□□□ -0.6
HMGXB4-201ENST00000216106 HSPA5P11021 654 aaKnown RBP11.27□□□□□ -0.61
HMGXB4-201ENST00000216106 UHRF1BP1LA0JNW5 1464 aa11.26□□□□□ -0.61
HMGXB4-201ENST00000216106 NBPF8Q3BBV2 869 aa11.25□□□□□ -0.61
HMGXB4-201ENST00000216106 EIF4G2P78344 907 aaKnown RBP eCLIP11.25□□□□□ -0.61
HMGXB4-201ENST00000216106 KDM5DQ9BY66 1539 aa11.25□□□□□ -0.61
HMGXB4-201ENST00000216106 RSPH4AQ5TD94 716 aa11.24□□□□□ -0.61
HMGXB4-201ENST00000216106 ANP32CO43423 234 aa11.23□□□□□ -0.61
HMGXB4-201ENST00000216106 MAST1Q9Y2H9 1570 aa11.23□□□□□ -0.61
HMGXB4-201ENST00000216106 WASHC2AQ641Q2 1341 aa11.22□□□□□ -0.61
HMGXB4-201ENST00000216106 ARHGEF12Q9NZN5 1544 aa11.22□□□□□ -0.61
HMGXB4-201ENST00000216106 PLEKHH2Q8IVE3 1493 aa11.22□□□□□ -0.61
HMGXB4-201ENST00000216106 PLCH2O75038 1416 aa11.22□□□□□ -0.61
HMGXB4-201ENST00000216106 FAM135AQ9P2D6 1515 aa11.21□□□□□ -0.62
HMGXB4-201ENST00000216106 PLXNC1O60486 1568 aa11.2□□□□□ -0.62
HMGXB4-201ENST00000216106 ZNF326Q5BKZ1 582 aaKnown RBP11.2□□□□□ -0.62
HMGXB4-201ENST00000216106 ABCC1P33527 1531 aa11.19□□□□□ -0.62
HMGXB4-201ENST00000216106 UNC13BO14795 1591 aa11.18□□□□□ -0.62
HMGXB4-201ENST00000216106 EFCAB2Q5VUJ9 269 aa11.18□□□□□ -0.62
HMGXB4-201ENST00000216106 C11orf95C9JLR9 678 aaPredicted RBP11.18□□□□□ -0.62
HMGXB4-201ENST00000216106 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.17□□□□□ -0.621e-6■■□□□ 12.6
HMGXB4-201ENST00000216106 WDR7Q9Y4E6 1490 aa11.17□□□□□ -0.62
HMGXB4-201ENST00000216106 SPATA31E1Q6ZUB1 1445 aa11.17□□□□□ -0.62
HMGXB4-201ENST00000216106 CCER2I3L3R5 266 aa11.17□□□□□ -0.62
HMGXB4-201ENST00000216106 TRAPPC8Q9Y2L5 1435 aa11.16□□□□□ -0.62
HMGXB4-201ENST00000216106 DUOX2Q9NRD8 1548 aa11.16□□□□□ -0.62
HMGXB4-201ENST00000216106 POLR1AO95602 1720 aaPredicted RBP11.15□□□□□ -0.62
HMGXB4-201ENST00000216106 CCDC7Q96M83 1385 aa11.15□□□□□ -0.62
HMGXB4-201ENST00000216106 CNTLNQ9NXG0 1405 aa11.14□□□□□ -0.63
HMGXB4-201ENST00000216106 IQGAP3Q86VI3 1631 aa11.14□□□□□ -0.63
HMGXB4-201ENST00000216106 ARAP3Q8WWN8 1544 aa11.13□□□□□ -0.63
HMGXB4-201ENST00000216106 ERBINQ96RT1 1412 aa11.13□□□□□ -0.63
HMGXB4-201ENST00000216106 USP47Q96K76 1375 aa11.13□□□□□ -0.63
HMGXB4-201ENST00000216106 KDM2AQ9Y2K7 1162 aa11.13□□□□□ -0.63
HMGXB4-201ENST00000216106 UHRF1BP1Q6BDS2 1440 aa11.12□□□□□ -0.63
HMGXB4-201ENST00000216106 KDM5CP41229 1560 aa11.12□□□□□ -0.63
HMGXB4-201ENST00000216106 KIF7Q2M1P5 1343 aa11.12□□□□□ -0.63
HMGXB4-201ENST00000216106 AFAP1Q8N556 730 aa11.12□□□□□ -0.63
HMGXB4-201ENST00000216106 CCDC144AA2RUR9 1427 aa11.12□□□□□ -0.63
HMGXB4-201ENST00000216106 ABCA9Q8IUA7 1624 aa11.12□□□□□ -0.63
HMGXB4-201ENST00000216106 DCAF11Q8TEB1 546 aa11.12□□□□□ -0.63
HMGXB4-201ENST00000216106 FANCAO15360 1455 aa11.11□□□□□ -0.63
HMGXB4-201ENST00000216106 RALGAPBQ86X10 1494 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms