RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 MAGI3Q5TCQ9 1506 aa15.62■□□□□ 0.09
APOBEC3D-201ENST00000216099 MYOM3Q5VTT5 1437 aa15.6■□□□□ 0.09
APOBEC3D-201ENST00000216099 FOXD1Q16676 465 aa15.59■□□□□ 0.09
APOBEC3D-201ENST00000216099 FBXO3Q9UK99 471 aa15.59■□□□□ 0.09
APOBEC3D-201ENST00000216099 SETD5Q9C0A6 1442 aa15.58■□□□□ 0.09
APOBEC3D-201ENST00000216099 PTPN23Q9H3S7 1636 aa15.57■□□□□ 0.08
APOBEC3D-201ENST00000216099 CHMP7Q8WUX9 453 aaPredicted RBP15.56■□□□□ 0.08
APOBEC3D-201ENST00000216099 CDK13Q14004 1512 aaKnown RBP15.56■□□□□ 0.08
APOBEC3D-201ENST00000216099 RAB3GAP2Q9H2M9 1393 aa15.55■□□□□ 0.08
APOBEC3D-201ENST00000216099 TCOF1Q13428 1488 aaKnown RBP15.55■□□□□ 0.08
APOBEC3D-201ENST00000216099 CHD1O14646 1710 aa15.54■□□□□ 0.08
APOBEC3D-201ENST00000216099 NUP153P49790 1475 aaKnown RBP15.53■□□□□ 0.08
APOBEC3D-201ENST00000216099 FAM50AQ14320 339 aaKnown RBP15.53■□□□□ 0.08
APOBEC3D-201ENST00000216099 CARMIL2Q6F5E8 1435 aa15.52■□□□□ 0.07
APOBEC3D-201ENST00000216099 ADCY10Q96PN6 1610 aa15.51■□□□□ 0.07
APOBEC3D-201ENST00000216099 IFNLR1Q8IU57 520 aaPredicted RBP15.5■□□□□ 0.07
APOBEC3D-201ENST00000216099 MAPKBP1O60336 1514 aa15.5■□□□□ 0.07
APOBEC3D-201ENST00000216099 GCC2Q8IWJ2 1684 aa15.5■□□□□ 0.07
APOBEC3D-201ENST00000216099 ITGAEP38570 1179 aa15.5■□□□□ 0.07
APOBEC3D-201ENST00000216099 MIA2Q96PC5 1412 aa15.5■□□□□ 0.07
APOBEC3D-201ENST00000216099 SCAF1Q9H7N4 1312 aaKnown RBP15.5■□□□□ 0.07
APOBEC3D-201ENST00000216099 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.49■□□□□ 0.07
APOBEC3D-201ENST00000216099 ABCA8O94911 1581 aa15.48■□□□□ 0.07
APOBEC3D-201ENST00000216099 ITSN2Q9NZM3 1697 aa15.47■□□□□ 0.07
APOBEC3D-201ENST00000216099 SHROOM2Q13796 1616 aa15.47■□□□□ 0.07
APOBEC3D-201ENST00000216099 HFM1A2PYH4 1435 aa15.47■□□□□ 0.07
APOBEC3D-201ENST00000216099 ZNF316A6NFI3 1004 aaPredicted RBP15.45■□□□□ 0.06
APOBEC3D-201ENST00000216099 AKNAQ7Z591 1439 aa15.44■□□□□ 0.06
APOBEC3D-201ENST00000216099 BBXQ8WY36 941 aaPredicted RBP15.44■□□□□ 0.06
APOBEC3D-201ENST00000216099 JPH4Q96JJ6 628 aa15.44■□□□□ 0.06
APOBEC3D-201ENST00000216099 BCL11AQ9H165 835 aa15.44■□□□□ 0.06
APOBEC3D-201ENST00000216099 ARID3AQ99856 593 aa15.43■□□□□ 0.06
APOBEC3D-201ENST00000216099 PTPRKQ15262 1439 aa15.43■□□□□ 0.06
APOBEC3D-201ENST00000216099 PLB1Q6P1J6 1458 aa15.41■□□□□ 0.06
APOBEC3D-201ENST00000216099 TROQ12816 1431 aaPredicted RBP15.41■□□□□ 0.06
APOBEC3D-201ENST00000216099 DNMT1P26358 1616 aaKnown RBP15.41■□□□□ 0.06
APOBEC3D-201ENST00000216099 CDK11AQ9UQ88 783 aaPredicted RBP15.4■□□□□ 0.06
APOBEC3D-201ENST00000216099 NAIPQ13075 1403 aa15.39■□□□□ 0.05
APOBEC3D-201ENST00000216099 DIEXFQ68CQ4 756 aaKnown RBP15.37■□□□□ 0.05
APOBEC3D-201ENST00000216099 CNKSR2Q8WXI2 1034 aa15.37■□□□□ 0.05
APOBEC3D-201ENST00000216099 UACAQ9BZF9 1416 aa15.37■□□□□ 0.05
APOBEC3D-201ENST00000216099 KIF14Q15058 1648 aa15.36■□□□□ 0.05
APOBEC3D-201ENST00000216099 CROCC2H7BZ55 1655 aa15.36■□□□□ 0.05
APOBEC3D-201ENST00000216099 ADGBQ8N7X0 1667 aa15.36■□□□□ 0.05
APOBEC3D-201ENST00000216099 SLC4A2P04920 1241 aa15.36■□□□□ 0.05
APOBEC3D-201ENST00000216099 PRG4Q92954 1404 aaPredicted RBP15.35■□□□□ 0.05
APOBEC3D-201ENST00000216099 CDC42BPAQ5VT25 1732 aa15.35■□□□□ 0.05
APOBEC3D-201ENST00000216099 IGSF3O75054 1194 aa15.33■□□□□ 0.04
APOBEC3D-201ENST00000216099 CLASP1Q7Z460 1538 aa15.32■□□□□ 0.04
APOBEC3D-201ENST00000216099 ROCK1Q13464 1354 aa15.32■□□□□ 0.04
APOBEC3D-201ENST00000216099 ATP10BO94823 1461 aa15.31■□□□□ 0.04
APOBEC3D-201ENST00000216099 DAPK1P53355 1430 aa15.31■□□□□ 0.04
APOBEC3D-201ENST00000216099 ACIN1Q9UKV3 1341 aaKnown RBP15.31■□□□□ 0.04
APOBEC3D-201ENST00000216099 GPATCH8Q9UKJ3 1502 aaKnown RBP15.3■□□□□ 0.04
APOBEC3D-201ENST00000216099 CAMSAP2Q08AD1 1489 aa15.29■□□□□ 0.04
APOBEC3D-201ENST00000216099 ABCC10Q5T3U5 1492 aa15.29■□□□□ 0.04
APOBEC3D-201ENST00000216099 ARID3CA6NKF2 412 aa15.28■□□□□ 0.04
APOBEC3D-201ENST00000216099 PTPRGP23470 1445 aa15.28■□□□□ 0.04
APOBEC3D-201ENST00000216099 KDM6BO15054 1643 aa15.28■□□□□ 0.04
APOBEC3D-201ENST00000216099 ABCC5O15440 1437 aa15.28■□□□□ 0.04
APOBEC3D-201ENST00000216099 SPRYD3Q8NCJ5 442 aa15.27■□□□□ 0.03
APOBEC3D-201ENST00000216099 VASPP50552 380 aaPredicted RBP15.26■□□□□ 0.03
APOBEC3D-201ENST00000216099 BRPF1P55201 1214 aaPredicted RBP15.25■□□□□ 0.03
APOBEC3D-201ENST00000216099 ADGRL2O95490 1459 aa15.24■□□□□ 0.03
APOBEC3D-201ENST00000216099 PREX2Q70Z35 1606 aa15.24■□□□□ 0.03
APOBEC3D-201ENST00000216099 ABCC2Q92887 1545 aa15.24■□□□□ 0.03
APOBEC3D-201ENST00000216099 ERCC6L2Q5T890 1561 aa15.22■□□□□ 0.03
APOBEC3D-201ENST00000216099 CDC42BPBQ9Y5S2 1711 aa15.22■□□□□ 0.03
APOBEC3D-201ENST00000216099 SHANK2Q9UPX8 1470 aa15.22■□□□□ 0.03
APOBEC3D-201ENST00000216099 PLEKHD1A6NEE1 506 aa15.21■□□□□ 0.03
APOBEC3D-201ENST00000216099 ARHGEF5Q12774 1597 aa15.21■□□□□ 0.03
APOBEC3D-201ENST00000216099 NECTIN2Q92692 538 aa15.2■□□□□ 0.02
APOBEC3D-201ENST00000216099 C1orf115Q9H7X2 142 aa15.2■□□□□ 0.02
APOBEC3D-201ENST00000216099 UHRF1BP1LA0JNW5 1464 aa15.19■□□□□ 0.02
APOBEC3D-201ENST00000216099 DENND4BO75064 1496 aaPredicted RBP15.19■□□□□ 0.02
APOBEC3D-201ENST00000216099 RRP7BPQ9NSQ0 103 aa15.19■□□□□ 0.02
APOBEC3D-201ENST00000216099 CFDP1Q9UEE9 299 aaPredicted RBP15.19■□□□□ 0.02
APOBEC3D-201ENST00000216099 ATF5Q9Y2D1 282 aaPredicted RBP15.19■□□□□ 0.02
APOBEC3D-201ENST00000216099 SIN3AQ96ST3 1273 aa15.18■□□□□ 0.02
APOBEC3D-201ENST00000216099 MYO5CQ9NQX4 1742 aa15.18■□□□□ 0.02
APOBEC3D-201ENST00000216099 DNAJC5Q9H3Z4 198 aa15.17■□□□□ 0.02
APOBEC3D-201ENST00000216099 CHIC2Q9UKJ5 165 aa15.17■□□□□ 0.02
APOBEC3D-201ENST00000216099 ZNF644Q9H582 1327 aaPredicted RBP15.17■□□□□ 0.02
APOBEC3D-201ENST00000216099 ZCCHC11Q5TAX3 1644 aaKnown RBP15.16■□□□□ 0.02
APOBEC3D-201ENST00000216099 NCOA1Q15788 1441 aa15.15■□□□□ 0.02
APOBEC3D-201ENST00000216099 RGL2O15211 777 aa15.14■□□□□ 0.01
APOBEC3D-201ENST00000216099 SAMD9LQ8IVG5 1584 aa15.14■□□□□ 0.01
APOBEC3D-201ENST00000216099 KDM5BQ9UGL1 1544 aa15.14■□□□□ 0.01
APOBEC3D-201ENST00000216099 NEUROD1Q13562 356 aa15.14■□□□□ 0.01
APOBEC3D-201ENST00000216099 TTC37Q6PGP7 1564 aa15.13■□□□□ 0.01
APOBEC3D-201ENST00000216099 TONSLQ96HA7 1378 aa15.13■□□□□ 0.01
APOBEC3D-201ENST00000216099 PPP1R15AO75807 674 aaPredicted RBP15.13■□□□□ 0.01
APOBEC3D-201ENST00000216099 MAST1Q9Y2H9 1570 aa15.12■□□□□ 0.01
APOBEC3D-201ENST00000216099 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.11■□□□□ 0.01
APOBEC3D-201ENST00000216099 PIAS4Q8N2W9 510 aaPredicted RBP15.11■□□□□ 0.01
APOBEC3D-201ENST00000216099 ANKRD30AQ9BXX3 1397 aa15.11■□□□□ 0.01
APOBEC3D-201ENST00000216099 KDM5DQ9BY66 1539 aa15.09■□□□□ 0.01
APOBEC3D-201ENST00000216099 MPHOSPH9Q99550 1183 aa15.09■□□□□ 0.01
APOBEC3D-201ENST00000216099 C9orf84Q5VXU9 1444 aa15.09■□□□□ 0.01
APOBEC3D-201ENST00000216099 MBD5Q9P267 1494 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms