RNA–Protein interactions for RNA: ENST00000216083.6

CBX6-201, Transcript of chromobox 6, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CBX6, Length 3,191 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-201ENST00000216083 NAIPQ13075 1403 aa21.45■■□□□ 1.02
CBX6-201ENST00000216083 ZCCHC11Q5TAX3 1644 aaKnown RBP21.44■■□□□ 1.02
CBX6-201ENST00000216083 HFM1A2PYH4 1435 aa21.44■■□□□ 1.02
CBX6-201ENST00000216083 CDC42BPAQ5VT25 1732 aa21.44■■□□□ 1.02
CBX6-201ENST00000216083 ABCC5O15440 1437 aa21.44■■□□□ 1.02
CBX6-201ENST00000216083 CENPBP07199 599 aaPredicted RBP21.44■■□□□ 1.02
CBX6-201ENST00000216083 DAPK1P53355 1430 aa21.44■■□□□ 1.02
CBX6-201ENST00000216083 DIEXFQ68CQ4 756 aaKnown RBP21.42■■□□□ 1.02
CBX6-201ENST00000216083 ITSN2Q9NZM3 1697 aa21.42■■□□□ 1.02
CBX6-201ENST00000216083 UHRF1BP1LA0JNW5 1464 aa21.41■■□□□ 1.02
CBX6-201ENST00000216083 KDM5BQ9UGL1 1544 aa21.41■■□□□ 1.02
CBX6-201ENST00000216083 HNRNPMP52272 730 aaKnown RBP eCLIP21.39■■□□□ 1.02
CBX6-201ENST00000216083 TTC37Q6PGP7 1564 aa21.39■■□□□ 1.01
CBX6-201ENST00000216083 MAPKBP1O60336 1514 aa21.37■■□□□ 1.01
CBX6-201ENST00000216083 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.37■■□□□ 1.01
CBX6-201ENST00000216083 DNMT1P26358 1616 aaKnown RBP21.37■■□□□ 1.01
CBX6-201ENST00000216083 KDM6BO15054 1643 aa21.37■■□□□ 1.01
CBX6-201ENST00000216083 SIN3AQ96ST3 1273 aa21.36■■□□□ 1.01
CBX6-201ENST00000216083 TRIM52Q96A61 297 aa21.34■■□□□ 1.01
CBX6-201ENST00000216083 CLSPNQ9HAW4 1339 aa21.33■■□□□ 1.01
CBX6-201ENST00000216083 CDC42BPBQ9Y5S2 1711 aa21.33■■□□□ 1.01
CBX6-201ENST00000216083 ARHGAP5Q13017 1502 aa21.3■■□□□ 1
CBX6-201ENST00000216083 AKNAQ7Z591 1439 aa21.3■■□□□ 1
CBX6-201ENST00000216083 PREX2Q70Z35 1606 aa21.29■■□□□ 1
CBX6-201ENST00000216083 CYB5RLQ6IPT4 315 aa21.28■■□□□ 1
CBX6-201ENST00000216083 SAMD9LQ8IVG5 1584 aa21.28■■□□□ 1
CBX6-201ENST00000216083 GCC2Q8IWJ2 1684 aa21.27■■□□□ 1
CBX6-201ENST00000216083 NPM1P06748 294 aaKnown RBP eCLIP21.26■□□□□ 0.99
CBX6-201ENST00000216083 ROCK1Q13464 1354 aa21.25■□□□□ 0.99
CBX6-201ENST00000216083 NCOA1Q15788 1441 aa21.25■□□□□ 0.99
CBX6-201ENST00000216083 WDR7Q9Y4E6 1490 aa21.25■□□□□ 0.99
CBX6-201ENST00000216083 ASXL2Q76L83 1435 aa21.25■□□□□ 0.99
CBX6-201ENST00000216083 TSPY4P0CV99 314 aa21.24■□□□□ 0.99
CBX6-201ENST00000216083 TSPY10P0CW01 314 aa21.24■□□□□ 0.99
CBX6-201ENST00000216083 MBD5Q9P267 1494 aa21.24■□□□□ 0.99
CBX6-201ENST00000216083 FOXD1Q16676 465 aa21.24■□□□□ 0.99
CBX6-201ENST00000216083 MYO5CQ9NQX4 1742 aa21.23■□□□□ 0.99
CBX6-201ENST00000216083 SYCP2Q9BX26 1530 aa21.23■□□□□ 0.99
CBX6-201ENST00000216083 C9orf84Q5VXU9 1444 aa21.22■□□□□ 0.99
CBX6-201ENST00000216083 CROCC2H7BZ55 1655 aa21.21■□□□□ 0.99
CBX6-201ENST00000216083 PLCH2O75038 1416 aa21.21■□□□□ 0.99
CBX6-201ENST00000216083 ANKRD30AQ9BXX3 1397 aa21.2■□□□□ 0.98
CBX6-201ENST00000216083 EFCAB2Q5VUJ9 269 aa21.18■□□□□ 0.98
CBX6-201ENST00000216083 ARHGEF12Q9NZN5 1544 aa21.18■□□□□ 0.98
CBX6-201ENST00000216083 MPHOSPH9Q99550 1183 aa21.18■□□□□ 0.98
CBX6-201ENST00000216083 DENND4BO75064 1496 aaPredicted RBP21.17■□□□□ 0.98
CBX6-201ENST00000216083 ADGBQ8N7X0 1667 aa21.16■□□□□ 0.98
CBX6-201ENST00000216083 CCDC141Q6ZP82 1450 aa21.16■□□□□ 0.98
CBX6-201ENST00000216083 ADGRL2O95490 1459 aa21.15■□□□□ 0.98
CBX6-201ENST00000216083 ARHGEF5Q12774 1597 aa21.13■□□□□ 0.97
CBX6-201ENST00000216083 ANKRD50Q9ULJ7 1429 aa21.13■□□□□ 0.97
CBX6-201ENST00000216083 RIMBP3CA6NJZ7 1639 aa21.13■□□□□ 0.97
CBX6-201ENST00000216083 RIMBP3BA6NNM3 1639 aa21.13■□□□□ 0.97
CBX6-201ENST00000216083 RIMBP3Q9UFD9 1639 aa21.13■□□□□ 0.97
CBX6-201ENST00000216083 KIF15Q9NS87 1388 aa21.13■□□□□ 0.97
CBX6-201ENST00000216083 AFAP1Q8N556 730 aa21.12■□□□□ 0.97
CBX6-201ENST00000216083 SLC4A1APQ9BWU0 796 aaKnown RBP21.12■□□□□ 0.97
CBX6-201ENST00000216083 SHANK2Q9UPX8 1470 aa21.12■□□□□ 0.97
CBX6-201ENST00000216083 TRAPPC8Q9Y2L5 1435 aa21.11■□□□□ 0.97
CBX6-201ENST00000216083 ZNF316A6NFI3 1004 aaPredicted RBP21.09■□□□□ 0.97
CBX6-201ENST00000216083 RSPH4AQ5TD94 716 aa21.08■□□□□ 0.97
CBX6-201ENST00000216083 KIAA1107Q9UPP5 1409 aa21.08■□□□□ 0.96
CBX6-201ENST00000216083 FANCAO15360 1455 aa21.07■□□□□ 0.96
CBX6-201ENST00000216083 ABCA9Q8IUA7 1624 aa21.07■□□□□ 0.96
CBX6-201ENST00000216083 ABCC1P33527 1531 aa21.06■□□□□ 0.96
CBX6-201ENST00000216083 PLEKHH2Q8IVE3 1493 aa21.05■□□□□ 0.96
CBX6-201ENST00000216083 PZPP20742 1482 aa21.03■□□□□ 0.96
CBX6-201ENST00000216083 NUP155O75694 1391 aa21.03■□□□□ 0.96
CBX6-201ENST00000216083 MYT1LQ9UL68 1186 aa21.02■□□□□ 0.96
CBX6-201ENST00000216083 TONSLQ96HA7 1378 aa21.02■□□□□ 0.96
CBX6-201ENST00000216083 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.01■□□□□ 0.95
CBX6-201ENST00000216083 CD109Q6YHK3 1445 aa21■□□□□ 0.95
CBX6-201ENST00000216083 PKD2Q13563 968 aa21■□□□□ 0.95
CBX6-201ENST00000216083 SPAG9O60271 1321 aaKnown RBP21■□□□□ 0.95
CBX6-201ENST00000216083 SCAPERQ9BY12 1400 aa21■□□□□ 0.95
CBX6-201ENST00000216083 ADGRL1O94910 1474 aa20.99■□□□□ 0.95
CBX6-201ENST00000216083 ARAP3Q8WWN8 1544 aa20.97■□□□□ 0.95
CBX6-201ENST00000216083 PPP1R15AO75807 674 aaPredicted RBP20.97■□□□□ 0.95
CBX6-201ENST00000216083 ANKRD30BQ9BXX2 1392 aa20.96■□□□□ 0.95
CBX6-201ENST00000216083 MAST1Q9Y2H9 1570 aa20.96■□□□□ 0.95
CBX6-201ENST00000216083 MIER1Q8N108 512 aa20.94■□□□□ 0.94
CBX6-201ENST00000216083 HIRIP3Q9BW71 556 aaPredicted RBP20.92■□□□□ 0.94
CBX6-201ENST00000216083 TIMELESSQ9UNS1 1208 aa20.91■□□□□ 0.94
CBX6-201ENST00000216083 FAM69CQ0P6D2 419 aa20.9■□□□□ 0.94
CBX6-201ENST00000216083 PLXNC1O60486 1568 aa20.9■□□□□ 0.94
CBX6-201ENST00000216083 L3MBTL2Q969R5 705 aa20.89■□□□□ 0.94
CBX6-201ENST00000216083 ZFYVE16Q7Z3T8 1539 aa20.89■□□□□ 0.93
CBX6-201ENST00000216083 RAPGEF3O95398 923 aa20.88■□□□□ 0.93
CBX6-201ENST00000216083 DUOX2Q9NRD8 1548 aa20.87■□□□□ 0.93
CBX6-201ENST00000216083 ATP7AQ04656 1500 aa20.85■□□□□ 0.93
CBX6-201ENST00000216083 FAM135AQ9P2D6 1515 aa20.85■□□□□ 0.93
CBX6-201ENST00000216083 RPRD2Q5VT52 1461 aaKnown RBP20.83■□□□□ 0.93
CBX6-201ENST00000216083 RTEL1-TNFRSF6BF6WH68 1400 aa20.83■□□□□ 0.92
CBX6-201ENST00000216083 KDM5DQ9BY66 1539 aa20.82■□□□□ 0.92
CBX6-201ENST00000216083 ERBINQ96RT1 1412 aa20.81■□□□□ 0.92
CBX6-201ENST00000216083 KIF3BO15066 747 aa20.81■□□□□ 0.92
CBX6-201ENST00000216083 INO80Q9ULG1 1556 aaPredicted RBP20.81■□□□□ 0.92
CBX6-201ENST00000216083 ZNF518AQ6AHZ1 1483 aa20.79■□□□□ 0.92
CBX6-201ENST00000216083 UNC13BO14795 1591 aa20.78■□□□□ 0.92
CBX6-201ENST00000216083 POGZQ7Z3K3 1410 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms