RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 HECW1Q76N89 1606 aa20.31■□□□□ 0.84
TMEM38A-201ENST00000187762 CDK13Q14004 1512 aaKnown RBP20.3■□□□□ 0.84
TMEM38A-201ENST00000187762 B4GALNT3Q6L9W6 998 aa20.3■□□□□ 0.84
TMEM38A-201ENST00000187762 EPRSP07814 1512 aaKnown RBP20.28■□□□□ 0.84
TMEM38A-201ENST00000187762 IPO9Q96P70 1041 aaKnown RBP20.28■□□□□ 0.84
TMEM38A-201ENST00000187762 WASHC2AQ641Q2 1341 aa20.26■□□□□ 0.83
TMEM38A-201ENST00000187762 KDM6BO15054 1643 aa20.26■□□□□ 0.83
TMEM38A-201ENST00000187762 TCOF1Q13428 1488 aaKnown RBP20.25■□□□□ 0.83
TMEM38A-201ENST00000187762 ANP32AP39687 249 aaKnown RBP20.25■□□□□ 0.83
TMEM38A-201ENST00000187762 GCC2Q8IWJ2 1684 aa20.25■□□□□ 0.83
TMEM38A-201ENST00000187762 KDM5BQ9UGL1 1544 aa20.24■□□□□ 0.83
TMEM38A-201ENST00000187762 MRC2Q9UBG0 1479 aa20.24■□□□□ 0.83
TMEM38A-201ENST00000187762 ZBTB47Q9UFB7 747 aaPredicted RBP20.23■□□□□ 0.83
TMEM38A-201ENST00000187762 WDR62O43379 1518 aa20.23■□□□□ 0.83
TMEM38A-201ENST00000187762 ZNF608Q9ULD9 1512 aaPredicted RBP20.22■□□□□ 0.83
TMEM38A-201ENST00000187762 DENND4BO75064 1496 aaPredicted RBP20.22■□□□□ 0.83
TMEM38A-201ENST00000187762 C11orf95C9JLR9 678 aaPredicted RBP20.21■□□□□ 0.83
TMEM38A-201ENST00000187762 WASHC2CQ9Y4E1 1318 aa20.14■□□□□ 0.82
TMEM38A-201ENST00000187762 EIF5BO60841 1220 aaKnown RBP20.14■□□□□ 0.82
TMEM38A-201ENST00000187762 MIA2Q96PC5 1412 aa20.14■□□□□ 0.81
TMEM38A-201ENST00000187762 FOXD1Q16676 465 aa20.13■□□□□ 0.81
TMEM38A-201ENST00000187762 AKNAQ7Z591 1439 aa20.12■□□□□ 0.81
TMEM38A-201ENST00000187762 KIAA0556O60303 1618 aa20.12■□□□□ 0.81
TMEM38A-201ENST00000187762 DISP1Q96F81 1524 aa20.11■□□□□ 0.81
TMEM38A-201ENST00000187762 PKNOX2Q96KN3 472 aa20.11■□□□□ 0.81
TMEM38A-201ENST00000187762 IFT140Q96RY7 1462 aa20.11■□□□□ 0.81
TMEM38A-201ENST00000187762 MPHOSPH9Q99550 1183 aa20.1■□□□□ 0.81
TMEM38A-201ENST00000187762 USP35Q9P2H5 1018 aa20.09■□□□□ 0.81
TMEM38A-201ENST00000187762 ZNF644Q9H582 1327 aaPredicted RBP20.08■□□□□ 0.81
TMEM38A-201ENST00000187762 HSPA5P11021 654 aaKnown RBP20.08■□□□□ 0.8
TMEM38A-201ENST00000187762 NUP153P49790 1475 aaKnown RBP20.08■□□□□ 0.8
TMEM38A-201ENST00000187762 KIAA0586Q9BVV6 1533 aa20.07■□□□□ 0.8
TMEM38A-201ENST00000187762 NEFMP07197 916 aa20.06■□□□□ 0.8
TMEM38A-201ENST00000187762 DAPK1P53355 1430 aa20.06■□□□□ 0.8
TMEM38A-201ENST00000187762 EIF4G3O43432 1585 aaKnown RBP20.06■□□□□ 0.8
TMEM38A-201ENST00000187762 BRPF3Q9ULD4 1205 aa20.05■□□□□ 0.8
TMEM38A-201ENST00000187762 RAPGEF6Q8TEU7 1601 aa20.05■□□□□ 0.8
TMEM38A-201ENST00000187762 L3MBTL2Q969R5 705 aa20.04■□□□□ 0.8
TMEM38A-201ENST00000187762 GRIN2AQ12879 1464 aa20.04■□□□□ 0.8
TMEM38A-201ENST00000187762 DNMT1P26358 1616 aaKnown RBP20.03■□□□□ 0.8
TMEM38A-201ENST00000187762 ABCC5O15440 1437 aa20.03■□□□□ 0.8
TMEM38A-201ENST00000187762 LAS1LQ9Y4W2 734 aaKnown RBP20.01■□□□□ 0.79
TMEM38A-201ENST00000187762 EIF4G2P78344 907 aaKnown RBP eCLIP19.99■□□□□ 0.79
TMEM38A-201ENST00000187762 PRG4Q92954 1404 aaPredicted RBP19.98■□□□□ 0.79
TMEM38A-201ENST00000187762 ROCK1Q13464 1354 aa19.98■□□□□ 0.79
TMEM38A-201ENST00000187762 ZBED9Q6R2W3 1325 aa19.96■□□□□ 0.79
TMEM38A-201ENST00000187762 ANKRD30BQ9BXX2 1392 aa19.96■□□□□ 0.79
TMEM38A-201ENST00000187762 PLB1Q6P1J6 1458 aa19.95■□□□□ 0.78
TMEM38A-201ENST00000187762 NBPF8Q3BBV2 869 aa19.94■□□□□ 0.78
TMEM38A-201ENST00000187762 CEP170Q5SW79 1584 aa19.94■□□□□ 0.78
TMEM38A-201ENST00000187762 RPRD2Q5VT52 1461 aaKnown RBP19.94■□□□□ 0.78
TMEM38A-201ENST00000187762 SLC4A1APQ9BWU0 796 aaKnown RBP19.94■□□□□ 0.78
TMEM38A-201ENST00000187762 RSPH6AQ9H0K4 717 aa19.93■□□□□ 0.78
TMEM38A-201ENST00000187762 PPM1GO15355 546 aaPredicted RBP19.92■□□□□ 0.78
TMEM38A-201ENST00000187762 FBLN2P98095 1184 aa19.92■□□□□ 0.78
TMEM38A-201ENST00000187762 CCDC184Q52MB2 194 aa19.92■□□□□ 0.78
TMEM38A-201ENST00000187762 KIF14Q15058 1648 aa19.92■□□□□ 0.78
TMEM38A-201ENST00000187762 TEX14Q8IWB6 1497 aa19.92■□□□□ 0.78
TMEM38A-201ENST00000187762 CAMSAP2Q08AD1 1489 aa19.92■□□□□ 0.78
TMEM38A-201ENST00000187762 CHMP7Q8WUX9 453 aaPredicted RBP19.91■□□□□ 0.78
TMEM38A-201ENST00000187762 TROQ12816 1431 aaPredicted RBP19.91■□□□□ 0.78
TMEM38A-201ENST00000187762 ERCC6Q03468 1493 aa19.91■□□□□ 0.78
TMEM38A-201ENST00000187762 ZNF777Q9ULD5 760 aaPredicted RBP19.9■□□□□ 0.78
TMEM38A-201ENST00000187762 CNTLNQ9NXG0 1405 aa19.9■□□□□ 0.78
TMEM38A-201ENST00000187762 GSE1Q14687 1217 aa19.89■□□□□ 0.78
TMEM38A-201ENST00000187762 NPM2Q86SE8 214 aaKnown RBP19.89■□□□□ 0.78
TMEM38A-201ENST00000187762 CFDP1Q9UEE9 299 aaPredicted RBP19.89■□□□□ 0.78
TMEM38A-201ENST00000187762 ITSN2Q9NZM3 1697 aa19.88■□□□□ 0.77
TMEM38A-201ENST00000187762 CCDC7Q96M83 1385 aa19.88■□□□□ 0.77
TMEM38A-201ENST00000187762 NCOA1Q15788 1441 aa19.87■□□□□ 0.77
TMEM38A-201ENST00000187762 MAGI1Q96QZ7 1491 aaPredicted RBP19.87■□□□□ 0.77
TMEM38A-201ENST00000187762 FAM9BQ8IZU0 186 aa19.87■□□□□ 0.77
TMEM38A-201ENST00000187762 GPATCH8Q9UKJ3 1502 aaKnown RBP19.87■□□□□ 0.77
TMEM38A-201ENST00000187762 PZPP20742 1482 aa19.87■□□□□ 0.77
TMEM38A-201ENST00000187762 SYNJ2O15056 1496 aa19.86■□□□□ 0.77
TMEM38A-201ENST00000187762 ADGBQ8N7X0 1667 aa19.86■□□□□ 0.77
TMEM38A-201ENST00000187762 ADCY10Q96PN6 1610 aa19.83■□□□□ 0.77
TMEM38A-201ENST00000187762 CROCC2H7BZ55 1655 aa19.83■□□□□ 0.76
TMEM38A-201ENST00000187762 RNF123Q5XPI4 1314 aa19.81■□□□□ 0.76
TMEM38A-201ENST00000187762 SMG6Q86US8 1419 aaKnown RBP19.81■□□□□ 0.76
TMEM38A-201ENST00000187762 JPH4Q96JJ6 628 aa19.8■□□□□ 0.76
TMEM38A-201ENST00000187762 PRKRIP1Q9H875 184 aaPredicted RBP19.8■□□□□ 0.76
TMEM38A-201ENST00000187762 SPATA31E1Q6ZUB1 1445 aa19.8■□□□□ 0.76
TMEM38A-201ENST00000187762 KIF7Q2M1P5 1343 aa19.79■□□□□ 0.76
TMEM38A-201ENST00000187762 MRS2Q9HD23 443 aa19.79■□□□□ 0.76
TMEM38A-201ENST00000187762 POLR1AO95602 1720 aaPredicted RBP19.78■□□□□ 0.76
TMEM38A-201ENST00000187762 FAM43AQ8N2R8 423 aa19.78■□□□□ 0.76
TMEM38A-201ENST00000187762 CARMIL2Q6F5E8 1435 aa19.78■□□□□ 0.76
TMEM38A-201ENST00000187762 GLIPR1L2Q4G1C9 344 aa19.78■□□□□ 0.76
TMEM38A-201ENST00000187762 FRAT1Q92837 279 aaPredicted RBP19.78■□□□□ 0.76
TMEM38A-201ENST00000187762 CDC42BPAQ5VT25 1732 aa19.77■□□□□ 0.76
TMEM38A-201ENST00000187762 NUP160Q12769 1436 aa19.77■□□□□ 0.76
TMEM38A-201ENST00000187762 ADGRL2O95490 1459 aa19.77■□□□□ 0.75
TMEM38A-201ENST00000187762 ZNF326Q5BKZ1 582 aaKnown RBP19.76■□□□□ 0.75
TMEM38A-201ENST00000187762 PKD2Q13563 968 aa19.75■□□□□ 0.75
TMEM38A-201ENST00000187762 KIAA1107Q9UPP5 1409 aa19.75■□□□□ 0.75
TMEM38A-201ENST00000187762 PDE4AP27815 886 aa19.74■□□□□ 0.75
TMEM38A-201ENST00000187762 TCERG1O14776 1098 aaKnown RBP19.73■□□□□ 0.75
TMEM38A-201ENST00000187762 NUDCQ9Y266 331 aa19.73■□□□□ 0.75
TMEM38A-201ENST00000187762 MBD5Q9P267 1494 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms