RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 GPATCH8Q9UKJ3 1502 aaKnown RBP37.5■■■■□ 3.59
RTN4R-201ENST00000043402 ROCK1Q13464 1354 aa37.5■■■■□ 3.59
RTN4R-201ENST00000043402 ATP10BO94823 1461 aa37.48■■■■□ 3.59
RTN4R-201ENST00000043402 YTHDC1Q96MU7 727 aaKnown RBP37.48■■■■□ 3.59
RTN4R-201ENST00000043402 TONSLQ96HA7 1378 aa37.47■■■■□ 3.59
RTN4R-201ENST00000043402 ITSN2Q9NZM3 1697 aa37.47■■■■□ 3.59
RTN4R-201ENST00000043402 TRIM52Q96A61 297 aa37.45■■■■□ 3.59
RTN4R-201ENST00000043402 CFDP1Q9UEE9 299 aaPredicted RBP37.45■■■■□ 3.59
RTN4R-201ENST00000043402 CAMSAP2Q08AD1 1489 aa37.44■■■■□ 3.58
RTN4R-201ENST00000043402 PLEKHD1A6NEE1 506 aa37.39■■■■□ 3.58
RTN4R-201ENST00000043402 PTPRGP23470 1445 aa37.39■■■■□ 3.58
RTN4R-201ENST00000043402 MPHOSPH9Q99550 1183 aa37.36■■■■□ 3.57
RTN4R-201ENST00000043402 KDM5BQ9UGL1 1544 aa37.34■■■■□ 3.57
RTN4R-201ENST00000043402 ABCC10Q5T3U5 1492 aa37.33■■■■□ 3.57
RTN4R-201ENST00000043402 ZNF777Q9ULD5 760 aaPredicted RBP37.31■■■■□ 3.56
RTN4R-201ENST00000043402 SHROOM2Q13796 1616 aa37.31■■■■□ 3.56
RTN4R-201ENST00000043402 CDC42BPAQ5VT25 1732 aa37.31■■■■□ 3.56
RTN4R-201ENST00000043402 NCOA1Q15788 1441 aa37.25■■■■□ 3.55
RTN4R-201ENST00000043402 CROCC2H7BZ55 1655 aa37.24■■■■□ 3.55
RTN4R-201ENST00000043402 ADGBQ8N7X0 1667 aa37.23■■■■□ 3.55
RTN4R-201ENST00000043402 HIRIP3Q9BW71 556 aaPredicted RBP37.22■■■■□ 3.55
RTN4R-201ENST00000043402 FOXD1Q16676 465 aa37.22■■■■□ 3.55
RTN4R-201ENST00000043402 ADGRL2O95490 1459 aa37.2■■■■□ 3.55
RTN4R-201ENST00000043402 GTF3C3Q9Y5Q9 886 aa37.18■■■■□ 3.54
RTN4R-201ENST00000043402 ERCC6L2Q5T890 1561 aa37.17■■■■□ 3.54
RTN4R-201ENST00000043402 DDX10Q13206 875 aaKnown RBP37.15■■■■□ 3.54
RTN4R-201ENST00000043402 ANKRD30BQ9BXX2 1392 aa37.13■■■■□ 3.53
RTN4R-201ENST00000043402 SLC4A1APQ9BWU0 796 aaKnown RBP37.09■■■■□ 3.53
RTN4R-201ENST00000043402 ANKRD30AQ9BXX3 1397 aa37.08■■■■□ 3.53
RTN4R-201ENST00000043402 PZPP20742 1482 aa37.07■■■■□ 3.52
RTN4R-201ENST00000043402 SHANK2Q9UPX8 1470 aa37.03■■■■□ 3.52
RTN4R-201ENST00000043402 RPRD2Q5VT52 1461 aaKnown RBP37.02■■■■□ 3.52
RTN4R-201ENST00000043402 L3MBTL2Q969R5 705 aa37.02■■■■□ 3.52
RTN4R-201ENST00000043402 C9orf84Q5VXU9 1444 aa37.01■■■■□ 3.52
RTN4R-201ENST00000043402 CLASP1Q7Z460 1538 aa37.01■■■■□ 3.51
RTN4R-201ENST00000043402 CDC42BPBQ9Y5S2 1711 aa37■■■■□ 3.51
RTN4R-201ENST00000043402 ABCC2Q92887 1545 aa36.99■■■■□ 3.51
RTN4R-201ENST00000043402 ANKRD50Q9ULJ7 1429 aa36.98■■■■□ 3.51
RTN4R-201ENST00000043402 PREX2Q70Z35 1606 aa36.97■■■■□ 3.51
RTN4R-201ENST00000043402 HNRNPMP52272 730 aaKnown RBP eCLIP36.97■■■■□ 3.51
RTN4R-201ENST00000043402 MBD5Q9P267 1494 aa36.96■■■■□ 3.51
RTN4R-201ENST00000043402 ARHGEF5Q12774 1597 aa36.95■■■■□ 3.51
RTN4R-201ENST00000043402 SAMD9LQ8IVG5 1584 aa36.95■■■■□ 3.51
RTN4R-201ENST00000043402 TEX14Q8IWB6 1497 aa36.91■■■■□ 3.5
RTN4R-201ENST00000043402 TSPY4P0CV99 314 aa36.91■■■■□ 3.5
RTN4R-201ENST00000043402 TSPY10P0CW01 314 aa36.91■■■■□ 3.5
RTN4R-201ENST00000043402 KCNH8Q96L42 1107 aa36.9■■■■□ 3.5
RTN4R-201ENST00000043402 TTC37Q6PGP7 1564 aa36.9■■■■□ 3.5
RTN4R-201ENST00000043402 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.89■■■■□ 3.56e-6■■■■■ 38.2
RTN4R-201ENST00000043402 KIAA1107Q9UPP5 1409 aa36.86■■■■□ 3.49
RTN4R-201ENST00000043402 HSPA5P11021 654 aaKnown RBP36.83■■■■□ 3.49
RTN4R-201ENST00000043402 CCDC141Q6ZP82 1450 aa36.83■■■■□ 3.49
RTN4R-201ENST00000043402 PKD2Q13563 968 aa36.81■■■■□ 3.48
RTN4R-201ENST00000043402 KIF15Q9NS87 1388 aa36.81■■■■□ 3.48
RTN4R-201ENST00000043402 NBPF8Q3BBV2 869 aa36.8■■■■□ 3.48
RTN4R-201ENST00000043402 ARHGAP5Q13017 1502 aa36.78■■■■□ 3.48
RTN4R-201ENST00000043402 NUP155O75694 1391 aa36.77■■■■□ 3.48
RTN4R-201ENST00000043402 ZCCHC11Q5TAX3 1644 aaKnown RBP36.76■■■■□ 3.48
RTN4R-201ENST00000043402 UHRF1BP1LA0JNW5 1464 aa36.76■■■■□ 3.48
RTN4R-201ENST00000043402 PELP1Q8IZL8 1130 aaKnown RBP36.76■■■■□ 3.48
RTN4R-201ENST00000043402 SYCP2Q9BX26 1530 aa36.76■■■■□ 3.47
RTN4R-201ENST00000043402 RSPH4AQ5TD94 716 aa36.76■■■■□ 3.47
RTN4R-201ENST00000043402 EIF4G2P78344 907 aaKnown RBP eCLIP36.75■■■■□ 3.47
RTN4R-201ENST00000043402 KDM5DQ9BY66 1539 aa36.74■■■■□ 3.47
RTN4R-201ENST00000043402 MYO5CQ9NQX4 1742 aa36.74■■■■□ 3.47
RTN4R-201ENST00000043402 WASHC2AQ641Q2 1341 aa36.69■■■■□ 3.46
RTN4R-201ENST00000043402 ANP32CO43423 234 aa36.68■■■■□ 3.46
RTN4R-201ENST00000043402 MAST1Q9Y2H9 1570 aa36.65■■■■□ 3.46
RTN4R-201ENST00000043402 CCER2I3L3R5 266 aa36.61■■■■□ 3.45
RTN4R-201ENST00000043402 PLCH2O75038 1416 aa36.6■■■■□ 3.45
RTN4R-201ENST00000043402 ARHGEF12Q9NZN5 1544 aa36.59■■■■□ 3.45
RTN4R-201ENST00000043402 PLEKHH2Q8IVE3 1493 aa36.59■■■■□ 3.45
RTN4R-201ENST00000043402 SPATA31E1Q6ZUB1 1445 aa36.56■■■■□ 3.44
RTN4R-201ENST00000043402 C11orf95C9JLR9 678 aaPredicted RBP36.56■■■■□ 3.44
RTN4R-201ENST00000043402 FAM135AQ9P2D6 1515 aa36.53■■■■□ 3.44
RTN4R-201ENST00000043402 PLXNC1O60486 1568 aa36.51■■■■□ 3.44
RTN4R-201ENST00000043402 EFCAB2Q5VUJ9 269 aa36.48■■■■□ 3.43
RTN4R-201ENST00000043402 CCDC7Q96M83 1385 aa36.47■■■■□ 3.43
RTN4R-201ENST00000043402 UNC13BO14795 1591 aa36.46■■■■□ 3.43
RTN4R-201ENST00000043402 ABCC1P33527 1531 aa36.44■■■■□ 3.42
RTN4R-201ENST00000043402 ZNF326Q5BKZ1 582 aaKnown RBP36.42■■■■□ 3.42
RTN4R-201ENST00000043402 CNTLNQ9NXG0 1405 aa36.41■■■■□ 3.42
RTN4R-201ENST00000043402 UHRF1BP1Q6BDS2 1440 aa36.41■■■■□ 3.42
RTN4R-201ENST00000043402 TRAPPC8Q9Y2L5 1435 aa36.39■■■■□ 3.42
RTN4R-201ENST00000043402 DUOX2Q9NRD8 1548 aa36.38■■■■□ 3.41
RTN4R-201ENST00000043402 POLR1AO95602 1720 aaPredicted RBP36.37■■■■□ 3.41
RTN4R-201ENST00000043402 WDR7Q9Y4E6 1490 aa36.36■■■■□ 3.41
RTN4R-201ENST00000043402 KIF7Q2M1P5 1343 aa36.35■■■■□ 3.41
RTN4R-201ENST00000043402 ARAP3Q8WWN8 1544 aa36.34■■■■□ 3.41
RTN4R-201ENST00000043402 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.34■■■■□ 3.41
RTN4R-201ENST00000043402 IQGAP3Q86VI3 1631 aa36.33■■■■□ 3.41
RTN4R-201ENST00000043402 USP47Q96K76 1375 aa36.32■■■■□ 3.41
RTN4R-201ENST00000043402 ERBINQ96RT1 1412 aa36.31■■■■□ 3.4
RTN4R-201ENST00000043402 RALGAPBQ86X10 1494 aa36.3■■■■□ 3.4
RTN4R-201ENST00000043402 KDM5CP41229 1560 aa36.29■■■■□ 3.4
RTN4R-201ENST00000043402 PLA2R1Q13018 1463 aa36.29■■■■□ 3.4
RTN4R-201ENST00000043402 MAGI2Q86UL8 1455 aa36.28■■■■□ 3.4
RTN4R-201ENST00000043402 BCORL1Q5H9F3 1711 aa36.26■■■■□ 3.39
RTN4R-201ENST00000043402 DCAF11Q8TEB1 546 aa36.26■■■■□ 3.39
RTN4R-201ENST00000043402 KDM2AQ9Y2K7 1162 aa36.26■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms