RNA–Protein interactions for RNA: ENST00000016946.7

RGPD5-201, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD5, Length 7,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-201ENST00000016946 WIZO95785 1651 aa14.48□□□□□ -0.09
RGPD5-201ENST00000016946 CCDC18Q5T9S5 1454 aa14.46□□□□□ -0.09
RGPD5-201ENST00000016946 SMARCA4P51532 1647 aa14.45□□□□□ -0.1
RGPD5-201ENST00000016946 PAK3O75914 559 aaPredicted RBP14.43□□□□□ -0.1
RGPD5-201ENST00000016946 CHMP4BQ9H444 224 aaKnown RBP14.41□□□□□ -0.1
RGPD5-201ENST00000016946 HSPA5P11021 654 aaKnown RBP14.41□□□□□ -0.1
RGPD5-201ENST00000016946 CSB-PGBD3P0DP91 1061 aa14.4□□□□□ -0.1
RGPD5-201ENST00000016946 FRAT1Q92837 279 aaPredicted RBP14.4□□□□□ -0.1
RGPD5-201ENST00000016946 NCAPD3P42695 1498 aa14.39□□□□□ -0.11
RGPD5-201ENST00000016946 MS4A1P11836 297 aa14.39□□□□□ -0.11
RGPD5-201ENST00000016946 RAB3GAP2Q9H2M9 1393 aa14.39□□□□□ -0.11
RGPD5-201ENST00000016946 ROCK2O75116 1388 aaKnown RBP14.39□□□□□ -0.11
RGPD5-201ENST00000016946 RTF1Q92541 710 aaKnown RBP14.38□□□□□ -0.11
RGPD5-201ENST00000016946 NUTM2DQ5VT03 806 aaPredicted RBP14.37□□□□□ -0.11
RGPD5-201ENST00000016946 EIF3AQ14152 1382 aaKnown RBP14.36□□□□□ -0.11
RGPD5-201ENST00000016946 GAPVD1Q14C86 1478 aa14.36□□□□□ -0.11
RGPD5-201ENST00000016946 OS9Q13438 667 aaPredicted RBP14.35□□□□□ -0.11
RGPD5-201ENST00000016946 CASC1Q6TDU7 716 aa14.35□□□□□ -0.11
RGPD5-201ENST00000016946 TERF2IPQ9NYB0 399 aa14.34□□□□□ -0.11
RGPD5-201ENST00000016946 FAM69CQ0P6D2 419 aa14.34□□□□□ -0.11
RGPD5-201ENST00000016946 FGD5Q6ZNL6 1462 aa14.33□□□□□ -0.11
RGPD5-201ENST00000016946 NGDNQ8NEJ9 315 aaKnown RBP14.33□□□□□ -0.11
RGPD5-201ENST00000016946 KTN1Q86UP2 1357 aaKnown RBP14.33□□□□□ -0.12
RGPD5-201ENST00000016946 IGF1RP08069 1367 aa14.33□□□□□ -0.12
RGPD5-201ENST00000016946 EIF5BO60841 1220 aaKnown RBP14.33□□□□□ -0.12
RGPD5-201ENST00000016946 CCDC9Q9Y3X0 531 aaKnown RBP14.31□□□□□ -0.12
RGPD5-201ENST00000016946 RAD54L2Q9Y4B4 1467 aa14.31□□□□□ -0.12
RGPD5-201ENST00000016946 U2AF1L5P0DN76 240 aaPredicted RBP14.31□□□□□ -0.12
RGPD5-201ENST00000016946 U2AF1Q01081 240 aaKnown RBP eCLIP14.31□□□□□ -0.12
RGPD5-201ENST00000016946 L3MBTL2Q969R5 705 aa14.31□□□□□ -0.12
RGPD5-201ENST00000016946 SUPT16HQ9Y5B9 1047 aaKnown RBP14.31□□□□□ -0.12
RGPD5-201ENST00000016946 BECN1Q14457 450 aa14.3□□□□□ -0.12
RGPD5-201ENST00000016946 GOLGA2Q08379 1002 aa14.29□□□□□ -0.12
RGPD5-201ENST00000016946 AQRO60306 1485 aaKnown RBP eCLIP14.29□□□□□ -0.12
RGPD5-201ENST00000016946 VGFO15240 615 aaPredicted RBP14.28□□□□□ -0.12
RGPD5-201ENST00000016946 CALD1Q05682 793 aaKnown RBP14.27□□□□□ -0.13
RGPD5-201ENST00000016946 NUTM2FA1L443 756 aa14.26□□□□□ -0.13
RGPD5-201ENST00000016946 TRAK1Q9UPV9 953 aa14.26□□□□□ -0.13
RGPD5-201ENST00000016946 NCLP19338 710 aaKnown RBP14.26□□□□□ -0.13
RGPD5-201ENST00000016946 RALBP1Q15311 655 aa14.26□□□□□ -0.13
RGPD5-201ENST00000016946 CCDC144AA2RUR9 1427 aa14.25□□□□□ -0.13
RGPD5-201ENST00000016946 RUSC2Q8N2Y8 1516 aa14.25□□□□□ -0.13
RGPD5-201ENST00000016946 CHMP4AQ9BY43 222 aa14.25□□□□□ -0.13
RGPD5-201ENST00000016946 CCER2I3L3R5 266 aa14.24□□□□□ -0.13
RGPD5-201ENST00000016946 RGS3P49796 1198 aa14.24□□□□□ -0.13
RGPD5-201ENST00000016946 ZNF330Q9Y3S2 320 aaPredicted RBP14.24□□□□□ -0.13
RGPD5-201ENST00000016946 DDRGK1Q96HY6 314 aa14.24□□□□□ -0.13
RGPD5-201ENST00000016946 CDK11BP21127 795 aaKnown RBP14.23□□□□□ -0.13
RGPD5-201ENST00000016946 AMPHP49418 695 aa14.22□□□□□ -0.13
RGPD5-201ENST00000016946 UACAQ9BZF9 1416 aa14.22□□□□□ -0.13
RGPD5-201ENST00000016946 GOLGA6L22H0YM25 854 aa14.22□□□□□ -0.13
RGPD5-201ENST00000016946 IPO8O15397 1037 aaKnown RBP14.21□□□□□ -0.13
RGPD5-201ENST00000016946 KCNJ4P48050 445 aa14.2□□□□□ -0.14
RGPD5-201ENST00000016946 FGD1P98174 961 aa14.2□□□□□ -0.14
RGPD5-201ENST00000016946 PPP4R2Q9NY27 417 aa14.2□□□□□ -0.14
RGPD5-201ENST00000016946 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.19□□□□□ -0.14
RGPD5-201ENST00000016946 GRIN2BQ13224 1484 aa14.19□□□□□ -0.14
RGPD5-201ENST00000016946 AEBP2Q6ZN18 517 aaPredicted RBP14.18□□□□□ -0.14
RGPD5-201ENST00000016946 STK31Q9BXU1 1019 aa14.17□□□□□ -0.14
RGPD5-201ENST00000016946 LTV1Q96GA3 475 aaPredicted RBP14.17□□□□□ -0.14
RGPD5-201ENST00000016946 ZRSR1Q15695 479 aaKnown RBP14.16□□□□□ -0.14
RGPD5-201ENST00000016946 MYOM3Q5VTT5 1437 aa14.16□□□□□ -0.14
RGPD5-201ENST00000016946 NBR1Q14596 966 aa14.16□□□□□ -0.14
RGPD5-201ENST00000016946 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.15□□□□□ -0.15
RGPD5-201ENST00000016946 ST20-MTHFSA0A0A6YYL1 179 aa14.14□□□□□ -0.15
RGPD5-201ENST00000016946 NLRP13Q86W25 1043 aa14.14□□□□□ -0.15
RGPD5-201ENST00000016946 EVC2Q86UK5 1308 aa14.14□□□□□ -0.15
RGPD5-201ENST00000016946 LMOD3Q0VAK6 560 aa14.13□□□□□ -0.15
RGPD5-201ENST00000016946 CFTRP13569 1480 aa14.13□□□□□ -0.15
RGPD5-201ENST00000016946 TMX4Q9H1E5 349 aaPredicted RBP14.13□□□□□ -0.15
RGPD5-201ENST00000016946 MRC2Q9UBG0 1479 aa14.13□□□□□ -0.15
RGPD5-201ENST00000016946 MINK1Q8N4C8 1332 aaPredicted RBP14.12□□□□□ -0.15
RGPD5-201ENST00000016946 PRG4Q92954 1404 aaPredicted RBP14.12□□□□□ -0.15
RGPD5-201ENST00000016946 COG3Q96JB2 828 aa14.12□□□□□ -0.15
RGPD5-201ENST00000016946 ANP32EQ9BTT0 268 aa14.12□□□□□ -0.15
RGPD5-201ENST00000016946 HDAC5Q9UQL6 1122 aa14.11□□□□□ -0.15
RGPD5-201ENST00000016946 ZNF644Q9H582 1327 aaPredicted RBP14.11□□□□□ -0.15
RGPD5-201ENST00000016946 TAOK2Q9UL54 1235 aa14.11□□□□□ -0.15
RGPD5-201ENST00000016946 KIF15Q9NS87 1388 aa14.11□□□□□ -0.15
RGPD5-201ENST00000016946 NAP1L2Q9ULW6 460 aaPredicted RBP14.11□□□□□ -0.15
RGPD5-201ENST00000016946 IFT140Q96RY7 1462 aa14.1□□□□□ -0.15
RGPD5-201ENST00000016946 NESP48681 1621 aa14.1□□□□□ -0.15
RGPD5-201ENST00000016946 APBB1O00213 710 aa14.09□□□□□ -0.15
RGPD5-201ENST00000016946 AFAP1Q8N556 730 aa14.09□□□□□ -0.15
RGPD5-201ENST00000016946 ITPRIPQ8IWB1 547 aa14.08□□□□□ -0.16
RGPD5-201ENST00000016946 CGNL1Q0VF96 1302 aa14.08□□□□□ -0.16
RGPD5-201ENST00000016946 STAC3Q96MF2 364 aa14.07□□□□□ -0.16
RGPD5-201ENST00000016946 PANK3Q9H999 370 aa14.07□□□□□ -0.16
RGPD5-201ENST00000016946 EVA1CP58658 441 aa14.07□□□□□ -0.16
RGPD5-201ENST00000016946 CFAP44Q96MT7 982 aa14.07□□□□□ -0.16
RGPD5-201ENST00000016946 B4GALNT3Q6L9W6 998 aa14.06□□□□□ -0.16
RGPD5-201ENST00000016946 MCCP23508 829 aa14.06□□□□□ -0.16
RGPD5-201ENST00000016946 SMC4Q9NTJ3 1288 aa14.06□□□□□ -0.16
RGPD5-201ENST00000016946 RCAN3Q9UKA8 241 aa14.06□□□□□ -0.16
RGPD5-201ENST00000016946 ISY1Q9ULR0 285 aaKnown RBP14.05□□□□□ -0.16
RGPD5-201ENST00000016946 GTF2E1P29083 439 aaPredicted RBP14.05□□□□□ -0.16
RGPD5-201ENST00000016946 SYNJ2O15056 1496 aa14.05□□□□□ -0.16
RGPD5-201ENST00000016946 TPRNQ4KMQ1 711 aa14.05□□□□□ -0.16
RGPD5-201ENST00000016946 FGD6Q6ZV73 1430 aa14.05□□□□□ -0.16
RGPD5-201ENST00000016946 CCDC146Q8IYE0 955 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms