RNA–Protein interactions for RNA: ENSMUST00000226414.1

Ubr5-204, Transcript of E3 ubiquitin-protein ligase UBR5, mousemouse

APPRIS P1 BASIC

Gene Ubr5, Length 8,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5-204ENSMUST00000226414 Ppm1gQ61074 542 aa10.85□□□□□ -0.67
Ubr5-204ENSMUST00000226414 Anks4bQ8K3X6 423 aa10.84□□□□□ -0.67
Ubr5-204ENSMUST00000226414 Eif4g2Q62448 906 aaKnown RBP10.83□□□□□ -0.67
Ubr5-204ENSMUST00000226414 Rufy1Q8BIJ7 712 aa10.83□□□□□ -0.68
Ubr5-204ENSMUST00000226414 Chaf1aQ9QWF0 911 aa10.83□□□□□ -0.68
Ubr5-204ENSMUST00000226414 Tpd52l1O54818 204 aa10.83□□□□□ -0.68
Ubr5-204ENSMUST00000226414 Tpm2P58774 284 aa10.82□□□□□ -0.68
Ubr5-204ENSMUST00000226414 Tmx4Q8C0L0 335 aa10.82□□□□□ -0.68
Ubr5-204ENSMUST00000226414 Eid3Q3V124 375 aa10.82□□□□□ -0.68
Ubr5-204ENSMUST00000226414 Spata24Q6P926 205 aa10.82□□□□□ -0.68
Ubr5-204ENSMUST00000226414 NgefQ8CHT1 710 aa10.81□□□□□ -0.68
Ubr5-204ENSMUST00000226414 Hap1O35668 628 aa10.8□□□□□ -0.68
Ubr5-204ENSMUST00000226414 Pus7B7ZNL8 666 aaKnown RBP10.8□□□□□ -0.68
Ubr5-204ENSMUST00000226414 Ccdc43Q9CR29 222 aaKnown RBP10.8□□□□□ -0.68
Ubr5-204ENSMUST00000226414 Mrs2Q5NCE8 434 aa10.8□□□□□ -0.68
Ubr5-204ENSMUST00000226414 L1td1Q587J6 782 aaKnown RBP10.79□□□□□ -0.68
Ubr5-204ENSMUST00000226414 Dctn1O08788 1281 aa10.78□□□□□ -0.68
Ubr5-204ENSMUST00000226414 Neurod2Q62414 383 aa10.78□□□□□ -0.68
Ubr5-204ENSMUST00000226414 Tpm1P58771 284 aa10.78□□□□□ -0.68
Ubr5-204ENSMUST00000226414 PtmsQ9D0J8 101 aaKnown RBP10.77□□□□□ -0.68
Ubr5-204ENSMUST00000226414 A0A0U1RNP2 1173 aa10.77□□□□□ -0.69
Ubr5-204ENSMUST00000226414 Map3k7clP58500 142 aa10.77□□□□□ -0.69
Ubr5-204ENSMUST00000226414 Fnbp4Q6ZQ03 1031 aa10.77□□□□□ -0.69
Ubr5-204ENSMUST00000226414 Gabpb2P81069 414 aa10.76□□□□□ -0.69
Ubr5-204ENSMUST00000226414 B4galnt3Q6L8S8 986 aa10.75□□□□□ -0.69
Ubr5-204ENSMUST00000226414 Iqcf3Q9D498 203 aa10.75□□□□□ -0.69
Ubr5-204ENSMUST00000226414 Ppm1fQ8CGA0 452 aa10.75□□□□□ -0.69
Ubr5-204ENSMUST00000226414 Mrvi1Q9WUX5 899 aaKnown RBP10.75□□□□□ -0.69
Ubr5-204ENSMUST00000226414 Krt82Q99M74 516 aa10.74□□□□□ -0.69
Ubr5-204ENSMUST00000226414 Taf3Q5HZG4 932 aa10.74□□□□□ -0.69
Ubr5-204ENSMUST00000226414 Nol10Q5RJG1 687 aaKnown RBP10.74□□□□□ -0.69
Ubr5-204ENSMUST00000226414 Znf704Q9ERQ3 566 aa10.74□□□□□ -0.69
Ubr5-204ENSMUST00000226414 Chmp4bQ9D8B3 224 aaKnown RBP10.74□□□□□ -0.69
Ubr5-204ENSMUST00000226414 KnstrnQ9D9Z1 312 aaKnown RBP10.73□□□□□ -0.69
Ubr5-204ENSMUST00000226414 Mapk8ip3Q9ESN9 1337 aa10.73□□□□□ -0.69
Ubr5-204ENSMUST00000226414 MecomP14404 1042 aa10.73□□□□□ -0.69
Ubr5-204ENSMUST00000226414 Ccer1Q9CQL2 403 aa10.72□□□□□ -0.69
Ubr5-204ENSMUST00000226414 Pnmal2G3X9N3 661 aa10.72□□□□□ -0.69
Ubr5-204ENSMUST00000226414 VgfQ0VGU4 617 aa10.72□□□□□ -0.69
Ubr5-204ENSMUST00000226414 Trim55G3X8Y1 545 aa10.72□□□□□ -0.69
Ubr5-204ENSMUST00000226414 Nap1l1P28656 391 aaKnown RBP10.72□□□□□ -0.69
Ubr5-204ENSMUST00000226414 Def6Q8C2K1 630 aa10.71□□□□□ -0.69
Ubr5-204ENSMUST00000226414 Sept6Q9R1T4 434 aa10.71□□□□□ -0.69
Ubr5-204ENSMUST00000226414 Ccdc96Q9CR92 584 aa10.71□□□□□ -0.69
Ubr5-204ENSMUST00000226414 Ggt6Q6PDE7 497 aa10.71□□□□□ -0.69
Ubr5-204ENSMUST00000226414 Ddx23D3Z0M9 819 aaKnown RBP10.7□□□□□ -0.7
Ubr5-204ENSMUST00000226414 HmmrQ00547 794 aaKnown RBP10.7□□□□□ -0.7
Ubr5-204ENSMUST00000226414 Gm21969J3QJZ1 289 aa10.7□□□□□ -0.7
Ubr5-204ENSMUST00000226414 Anp32eP97822 260 aaKnown RBP10.69□□□□□ -0.7
Ubr5-204ENSMUST00000226414 Skida1Q80YR3 822 aa10.69□□□□□ -0.7
Ubr5-204ENSMUST00000226414 4921530L21RikQ9CQ47 274 aa10.69□□□□□ -0.7
Ubr5-204ENSMUST00000226414 Ssr1Q9CY50 286 aaKnown RBP10.69□□□□□ -0.7
Ubr5-204ENSMUST00000226414 Exosc9Q9JHI7 438 aaKnown RBP10.69□□□□□ -0.7
Ubr5-204ENSMUST00000226414 Znhit6Q3UFB2 460 aaKnown RBP10.69□□□□□ -0.7
Ubr5-204ENSMUST00000226414 Cwc15Q9JHS9 229 aaKnown RBP10.68□□□□□ -0.7
Ubr5-204ENSMUST00000226414 Srpk2O54781 681 aaKnown RBP10.68□□□□□ -0.7
Ubr5-204ENSMUST00000226414 SlkO54988 1233 aa10.68□□□□□ -0.7
Ubr5-204ENSMUST00000226414 Ofd1Q80Z25 1017 aa10.67□□□□□ -0.7
Ubr5-204ENSMUST00000226414 Cspp1B2RX88 1205 aa10.67□□□□□ -0.7
Ubr5-204ENSMUST00000226414 IqubQ8CDK3 788 aa10.67□□□□□ -0.7
Ubr5-204ENSMUST00000226414 Ccar2Q8VDP4 922 aaKnown RBP10.66□□□□□ -0.7
Ubr5-204ENSMUST00000226414 Ddrgk1Q80WW9 315 aa10.66□□□□□ -0.7
Ubr5-204ENSMUST00000226414 Gps2Q921N8 327 aa10.66□□□□□ -0.7
Ubr5-204ENSMUST00000226414 Ipo7Q9EPL8 1038 aaKnown RBP10.66□□□□□ -0.7
Ubr5-204ENSMUST00000226414 Arhgef18Q6P9R4 1021 aa10.65□□□□□ -0.7
Ubr5-204ENSMUST00000226414 Pknox2Q8BG99 474 aa10.65□□□□□ -0.7
Ubr5-204ENSMUST00000226414 Utp3Q9JI13 469 aaKnown RBP10.65□□□□□ -0.7
Ubr5-204ENSMUST00000226414 Wdr78E9PYY5 807 aa10.65□□□□□ -0.7
Ubr5-204ENSMUST00000226414 Kcnj4P52189 445 aa10.65□□□□□ -0.7
Ubr5-204ENSMUST00000226414 Mns1Q61884 491 aa10.65□□□□□ -0.7
Ubr5-204ENSMUST00000226414 Pmfbp1Q9WVQ0 1022 aa10.65□□□□□ -0.7
Ubr5-204ENSMUST00000226414 AdnpQ9Z103 1108 aaKnown RBP10.65□□□□□ -0.71
Ubr5-204ENSMUST00000226414 Gbp4Q61107 620 aa10.64□□□□□ -0.71
Ubr5-204ENSMUST00000226414 Ccdc47Q9D024 483 aaKnown RBP10.64□□□□□ -0.71
Ubr5-204ENSMUST00000226414 MyclP10166 368 aa10.64□□□□□ -0.71
Ubr5-204ENSMUST00000226414 Gcom1E9PZ54 550 aa10.64□□□□□ -0.71
Ubr5-204ENSMUST00000226414 MyzapQ3UIJ9 466 aa10.64□□□□□ -0.71
Ubr5-204ENSMUST00000226414 March6Q6ZQ89 909 aa10.63□□□□□ -0.71
Ubr5-204ENSMUST00000226414 Npm1Q61937 292 aaKnown RBP10.63□□□□□ -0.71
Ubr5-204ENSMUST00000226414 Homer1Q9Z2Y3 366 aa10.63□□□□□ -0.71
Ubr5-204ENSMUST00000226414 Ush1cQ9ES64 910 aa10.62□□□□□ -0.71
Ubr5-204ENSMUST00000226414 Smarce1O54941 411 aaKnown RBP10.61□□□□□ -0.71
Ubr5-204ENSMUST00000226414 Sf3a1Q8K4Z5 791 aaKnown RBP10.61□□□□□ -0.71
Ubr5-204ENSMUST00000226414 Ipo9Q91YE6 1041 aa10.61□□□□□ -0.71
Ubr5-204ENSMUST00000226414 Sall2Q9QX96 1004 aa10.61□□□□□ -0.71
Ubr5-204ENSMUST00000226414 Commd10Q8JZY2 202 aa10.61□□□□□ -0.71
Ubr5-204ENSMUST00000226414 Rbm19Q8R3C6 952 aaKnown RBP10.61□□□□□ -0.71
Ubr5-204ENSMUST00000226414 Pde3bQ61409 1100 aa10.61□□□□□ -0.71
Ubr5-204ENSMUST00000226414 Arglu1Q3UL36 271 aaKnown RBP10.6□□□□□ -0.71
Ubr5-204ENSMUST00000226414 Supt16hQ920B9 1047 aa10.6□□□□□ -0.71
Ubr5-204ENSMUST00000226414 NudcO35685 332 aaKnown RBP10.6□□□□□ -0.71
Ubr5-204ENSMUST00000226414 Themis2Q91YX0 663 aa10.59□□□□□ -0.71
Ubr5-204ENSMUST00000226414 Brpf1B2RRD7 1212 aa10.59□□□□□ -0.71
Ubr5-204ENSMUST00000226414 HnrnpuQ8VEK3 800 aaKnown RBP10.59□□□□□ -0.71
Ubr5-204ENSMUST00000226414 Chmp3Q9CQ10 224 aa10.58□□□□□ -0.72
Ubr5-204ENSMUST00000226414 U2surpQ6NV83 1029 aaKnown RBP10.58□□□□□ -0.72
Ubr5-204ENSMUST00000226414 Sart3Q9JLI8 962 aaKnown RBP10.58□□□□□ -0.72
Ubr5-204ENSMUST00000226414 Kdm2aP59997 1161 aa10.58□□□□□ -0.72
Ubr5-204ENSMUST00000226414 1700123L14RikQ3V2K7 440 aa10.58□□□□□ -0.72
Ubr5-204ENSMUST00000226414 EzrP26040 586 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms