RNA–Protein interactions for RNA: ENSMUST00000211140.1

Ptpre-207, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ptpre, Length 5,753 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-207ENSMUST00000211140 Zfp777B9EKF4 885 aa21.8■■□□□ 1.08
Ptpre-207ENSMUST00000211140 Sin3aQ60520 1274 aaKnown RBP21.79■■□□□ 1.08
Ptpre-207ENSMUST00000211140 Sh3bp5Q9Z131 463 aa21.77■■□□□ 1.08
Ptpre-207ENSMUST00000211140 Pcmtd1P59913 357 aa21.74■■□□□ 1.07
Ptpre-207ENSMUST00000211140 Znf316Q6PGE4 1016 aa21.74■■□□□ 1.07
Ptpre-207ENSMUST00000211140 Map4P27546 1125 aaKnown RBP21.73■■□□□ 1.07
Ptpre-207ENSMUST00000211140 PtmsQ9D0J8 101 aaKnown RBP21.73■■□□□ 1.07
Ptpre-207ENSMUST00000211140 Zscan21Q07231 555 aa21.73■■□□□ 1.07
Ptpre-207ENSMUST00000211140 Mak16Q8BGS0 296 aaKnown RBP21.71■■□□□ 1.07
Ptpre-207ENSMUST00000211140 Tmf1B9EKI3 1091 aa21.7■■□□□ 1.07
Ptpre-207ENSMUST00000211140 MsnP26041 577 aaKnown RBP21.7■■□□□ 1.06
Ptpre-207ENSMUST00000211140 U2surpQ6NV83 1029 aaKnown RBP21.7■■□□□ 1.06
Ptpre-207ENSMUST00000211140 Gm973E9Q295 1059 aa21.69■■□□□ 1.06
Ptpre-207ENSMUST00000211140 Ipo8Q7TMY7 1010 aa21.69■■□□□ 1.06
Ptpre-207ENSMUST00000211140 Ifit1bl1D3Z6F0 470 aa21.67■■□□□ 1.06
Ptpre-207ENSMUST00000211140 Kif27Q7M6Z4 1394 aa21.67■■□□□ 1.06
Ptpre-207ENSMUST00000211140 Rassf8Q8CJ96 419 aa21.66■■□□□ 1.06
Ptpre-207ENSMUST00000211140 Cep162Q6ZQ06 1403 aa21.65■■□□□ 1.06
Ptpre-207ENSMUST00000211140 Cluap1Q8R3P7 413 aa21.65■■□□□ 1.06
Ptpre-207ENSMUST00000211140 Mfap1aC0HKD8 439 aaKnown RBP21.65■■□□□ 1.06
Ptpre-207ENSMUST00000211140 Mfap1bC0HKD9 439 aaKnown RBP21.65■■□□□ 1.06
Ptpre-207ENSMUST00000211140 Gtf2e1Q9D0D5 440 aa21.64■■□□□ 1.05
Ptpre-207ENSMUST00000211140 Rtf1A2AQ19 715 aaKnown RBP21.64■■□□□ 1.05
Ptpre-207ENSMUST00000211140 Tmco5bQ80X59 307 aa21.64■■□□□ 1.05
Ptpre-207ENSMUST00000211140 Sart3Q9JLI8 962 aaKnown RBP21.64■■□□□ 1.05
Ptpre-207ENSMUST00000211140 Anapc15P60007 132 aa21.62■■□□□ 1.05
Ptpre-207ENSMUST00000211140 U2af1Q9D883 239 aaKnown RBP21.62■■□□□ 1.05
Ptpre-207ENSMUST00000211140 Golga2Q921M4 999 aa21.62■■□□□ 1.05
Ptpre-207ENSMUST00000211140 Calcoco2A2A6M5 331 aa21.61■■□□□ 1.05
Ptpre-207ENSMUST00000211140 Mphosph9A6H5Y1 991 aa21.61■■□□□ 1.05
Ptpre-207ENSMUST00000211140 Plin1Q8CGN5 517 aa21.61■■□□□ 1.05
Ptpre-207ENSMUST00000211140 Ccdc88bQ4QRL3 1481 aa21.61■■□□□ 1.05
Ptpre-207ENSMUST00000211140 Ecm2Q5FW85 670 aa21.6■■□□□ 1.05
Ptpre-207ENSMUST00000211140 Trak1Q6PD31 939 aa21.59■■□□□ 1.05
Ptpre-207ENSMUST00000211140 Fyco1Q8VDC1 1437 aa21.58■■□□□ 1.05
Ptpre-207ENSMUST00000211140 Znf330Q922H9 316 aa21.58■■□□□ 1.04
Ptpre-207ENSMUST00000211140 Arhgap35Q91YM2 1499 aa21.57■■□□□ 1.04
Ptpre-207ENSMUST00000211140 Rrp12Q6P5B0 1295 aaKnown RBP21.57■■□□□ 1.04
Ptpre-207ENSMUST00000211140 CgnP59242 1191 aa21.56■■□□□ 1.04
Ptpre-207ENSMUST00000211140 Dcaf11Q91VU6 549 aa21.56■■□□□ 1.04
Ptpre-207ENSMUST00000211140 Iffo2Q8R2V2 512 aa21.55■■□□□ 1.04
Ptpre-207ENSMUST00000211140 Stk26Q99JT2 416 aa21.55■■□□□ 1.04
Ptpre-207ENSMUST00000211140 Baz1bQ9Z277 1479 aa21.54■■□□□ 1.04
Ptpre-207ENSMUST00000211140 CrbnQ8C7D2 445 aa21.54■■□□□ 1.04
Ptpre-207ENSMUST00000211140 Aebp1Q640N1 1128 aa21.54■■□□□ 1.04
Ptpre-207ENSMUST00000211140 MyclP10166 368 aa21.53■■□□□ 1.04
Ptpre-207ENSMUST00000211140 Nolc1E9Q5C9 702 aaKnown RBP21.52■■□□□ 1.04
Ptpre-207ENSMUST00000211140 Pde3bQ61409 1100 aa21.52■■□□□ 1.04
Ptpre-207ENSMUST00000211140 GorabQ8BRM2 368 aa21.52■■□□□ 1.04
Ptpre-207ENSMUST00000211140 ChgaP26339 463 aaKnown RBP21.52■■□□□ 1.04
Ptpre-207ENSMUST00000211140 Cabp1Q9JLK7 227 aa21.51■■□□□ 1.03
Ptpre-207ENSMUST00000211140 Rock2P70336 1388 aa21.51■■□□□ 1.03
Ptpre-207ENSMUST00000211140 SlkO54988 1233 aa21.49■■□□□ 1.03
Ptpre-207ENSMUST00000211140 Q3TQI7 289 aaKnown RBP21.48■■□□□ 1.03
Ptpre-207ENSMUST00000211140 CntlnA2AM05 1397 aa21.48■■□□□ 1.03
Ptpre-207ENSMUST00000211140 Fmn1Q05860 1466 aa21.48■■□□□ 1.03
Ptpre-207ENSMUST00000211140 Birc3O08863 600 aa21.47■■□□□ 1.03
Ptpre-207ENSMUST00000211140 RdxP26043 583 aaKnown RBP21.47■■□□□ 1.03
Ptpre-207ENSMUST00000211140 Kiaa0754Q69ZZ9 979 aa21.46■■□□□ 1.03
Ptpre-207ENSMUST00000211140 MecomP14404 1042 aa21.46■■□□□ 1.03
Ptpre-207ENSMUST00000211140 Tnnt1O88346 262 aa21.46■■□□□ 1.03
Ptpre-207ENSMUST00000211140 Ksr2Q3UVC0 959 aa21.45■■□□□ 1.02
Ptpre-207ENSMUST00000211140 R3hcc1Q8BSI6 488 aa21.45■■□□□ 1.02
Ptpre-207ENSMUST00000211140 Smarce1O54941 411 aaKnown RBP21.44■■□□□ 1.02
Ptpre-207ENSMUST00000211140 Cald1E9QA15 768 aaKnown RBP21.43■■□□□ 1.02
Ptpre-207ENSMUST00000211140 Ccar1Q8CH18 1146 aaKnown RBP21.43■■□□□ 1.02
Ptpre-207ENSMUST00000211140 Eif4g2Q62448 906 aaKnown RBP21.42■■□□□ 1.02
Ptpre-207ENSMUST00000211140 Ddrgk1Q80WW9 315 aa21.42■■□□□ 1.02
Ptpre-207ENSMUST00000211140 Kdm5dQ62240 1548 aa21.42■■□□□ 1.02
Ptpre-207ENSMUST00000211140 Taok2Q6ZQ29 1240 aa21.42■■□□□ 1.02
Ptpre-207ENSMUST00000211140 Senp3Q9EP97 568 aaKnown RBP21.41■■□□□ 1.02
Ptpre-207ENSMUST00000211140 Rpap1Q80TE0 1409 aa21.4■■□□□ 1.02
Ptpre-207ENSMUST00000211140 CrebrfQ8CDG5 640 aaKnown RBP21.4■■□□□ 1.02
Ptpre-207ENSMUST00000211140 Tpm3-rs7D3Z2H9 248 aa21.4■■□□□ 1.02
Ptpre-207ENSMUST00000211140 Gtf3c3Q3TMP1 882 aa21.4■■□□□ 1.02
Ptpre-207ENSMUST00000211140 Srcin1Q9QWI6 1250 aa21.39■■□□□ 1.01
Ptpre-207ENSMUST00000211140 Gpatch11Q3UFS4 262 aa21.38■■□□□ 1.01
Ptpre-207ENSMUST00000211140 Spag9Q58A65 1321 aaKnown RBP21.38■■□□□ 1.01
Ptpre-207ENSMUST00000211140 Nol10Q5RJG1 687 aaKnown RBP21.37■■□□□ 1.01
Ptpre-207ENSMUST00000211140 Nup155Q99P88 1391 aaKnown RBP21.36■■□□□ 1.01
Ptpre-207ENSMUST00000211140 Slc4a1apE9PX68 744 aa21.36■■□□□ 1.01
Ptpre-207ENSMUST00000211140 Trim30aP15533 496 aa21.36■■□□□ 1.01
Ptpre-207ENSMUST00000211140 Becn1O88597 448 aa21.35■■□□□ 1.01
Ptpre-207ENSMUST00000211140 4933402E13RikQ9D4D2 429 aa21.35■■□□□ 1.01
Ptpre-207ENSMUST00000211140 Brpf1B2RRD7 1212 aa21.35■■□□□ 1.01
Ptpre-207ENSMUST00000211140 VgfQ0VGU4 617 aa21.34■■□□□ 1.01
Ptpre-207ENSMUST00000211140 Atp6v1dP57746 247 aa21.34■■□□□ 1.01
Ptpre-207ENSMUST00000211140 Ylpm1Q9R0I7 1386 aaKnown RBP21.34■■□□□ 1.01
Ptpre-207ENSMUST00000211140 Smg6P61406 1418 aaKnown RBP21.34■■□□□ 1.01
Ptpre-207ENSMUST00000211140 Rsph3aQ3UFY4 516 aa21.31■■□□□ 1
Ptpre-207ENSMUST00000211140 Ccdc146E9Q9F7 977 aa21.31■■□□□ 1
Ptpre-207ENSMUST00000211140 Pibf1E9Q6K3 756 aa21.3■■□□□ 1
Ptpre-207ENSMUST00000211140 Cspp1B2RX88 1205 aa21.3■■□□□ 1
Ptpre-207ENSMUST00000211140 AknaQ80VW7 1404 aa21.29■■□□□ 1
Ptpre-207ENSMUST00000211140 Arid3cA6PWV5 409 aa21.29■■□□□ 1
Ptpre-207ENSMUST00000211140 Plekhh2Q8C115 1491 aa21.29■■□□□ 1
Ptpre-207ENSMUST00000211140 Lemd3Q9WU40 921 aa21.28■■□□□ 1
Ptpre-207ENSMUST00000211140 SetQ9EQU5 289 aaKnown RBP21.28■■□□□ 1
Ptpre-207ENSMUST00000211140 Sox12Q04890 314 aa21.27■■□□□ 1
Ptpre-207ENSMUST00000211140 Cgnl1Q6AW69 1298 aa21.27■□□□□ 0.99
Retrieved 100 of 22,080 RNA–protein pairs in 55.3 ms