RNA–Protein interactions for RNA: ENSMUST00000196908.4

Pdlim5-209, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-209ENSMUST00000196908 Adamts12Q811B3 1600 aa14.81□□□□□ -0.04
Pdlim5-209ENSMUST00000196908 Naip2Q9QUK4 1447 aa14.81□□□□□ -0.04
Pdlim5-209ENSMUST00000196908 Shroom4Q1W617 1475 aa14.81□□□□□ -0.04
Pdlim5-209ENSMUST00000196908 Rnf17Q99MV7 1640 aa14.81□□□□□ -0.04
Pdlim5-209ENSMUST00000196908 Wdr7Q920I9 1489 aa14.8□□□□□ -0.04
Pdlim5-209ENSMUST00000196908 Gtpbp6Q3U6U5 514 aa14.79□□□□□ -0.04
Pdlim5-209ENSMUST00000196908 Rpap1Q80TE0 1409 aa14.79□□□□□ -0.04
Pdlim5-209ENSMUST00000196908 AglF8VPN4 1532 aa14.76□□□□□ -0.05
Pdlim5-209ENSMUST00000196908 PtprmP28828 1452 aa14.75□□□□□ -0.05
Pdlim5-209ENSMUST00000196908 Kdm5bQ80Y84 1544 aa14.74□□□□□ -0.05
Pdlim5-209ENSMUST00000196908 MyclP10166 368 aa14.73□□□□□ -0.05
Pdlim5-209ENSMUST00000196908 Cdca7Q9D0M2 382 aa14.72□□□□□ -0.05
Pdlim5-209ENSMUST00000196908 C1qtnf12Q8R2Z0 308 aa14.71□□□□□ -0.05
Pdlim5-209ENSMUST00000196908 Pip4p2Q9CZX7 257 aa14.7□□□□□ -0.06
Pdlim5-209ENSMUST00000196908 Gm7298A0A0N4SVU1 1476 aa14.66□□□□□ -0.06
Pdlim5-209ENSMUST00000196908 WrnO09053 1401 aa14.66□□□□□ -0.06
Pdlim5-209ENSMUST00000196908 Atp10dQ8K2X1 1416 aa14.66□□□□□ -0.06
Pdlim5-209ENSMUST00000196908 Rrbp1Q99PL5 1605 aaKnown RBP14.65□□□□□ -0.06
Pdlim5-209ENSMUST00000196908 Abca5Q8K448 1642 aa14.63□□□□□ -0.07
Pdlim5-209ENSMUST00000196908 A2mQ6GQT1 1474 aa14.62□□□□□ -0.07
Pdlim5-209ENSMUST00000196908 NhsB1AV60 1647 aa14.59□□□□□ -0.07
Pdlim5-209ENSMUST00000196908 Clcn6O35454 870 aa14.59□□□□□ -0.07
Pdlim5-209ENSMUST00000196908 Neurl4Q5NCX5 1563 aa14.57□□□□□ -0.08
Pdlim5-209ENSMUST00000196908 Mroh2bQ7M6Y6 1581 aa14.57□□□□□ -0.08
Pdlim5-209ENSMUST00000196908 Safb2Q80YR5 991 aaKnown RBP14.57□□□□□ -0.08
Pdlim5-209ENSMUST00000196908 Camsap2Q8C1B1 1461 aa14.57□□□□□ -0.08
Pdlim5-209ENSMUST00000196908 Ahdc1Q6PAL7 1594 aaKnown RBP14.56□□□□□ -0.08
Pdlim5-209ENSMUST00000196908 Kank3Q9Z1P7 791 aa14.54□□□□□ -0.08
Pdlim5-209ENSMUST00000196908 Cul7Q8VE73 1689 aa14.53□□□□□ -0.08
Pdlim5-209ENSMUST00000196908 Arhgap31A6X8Z5 1425 aa14.52□□□□□ -0.08
Pdlim5-209ENSMUST00000196908 Npm2Q80W85 207 aa14.52□□□□□ -0.09
Pdlim5-209ENSMUST00000196908 Qser1A2BIE1 1698 aa14.52□□□□□ -0.09
Pdlim5-209ENSMUST00000196908 Kif14L0N7N1 1674 aaKnown RBP14.52□□□□□ -0.09
Pdlim5-209ENSMUST00000196908 SphkapQ6NSW3 1687 aa14.52□□□□□ -0.09
Pdlim5-209ENSMUST00000196908 Carmil1Q6EDY6 1374 aa14.51□□□□□ -0.09
Pdlim5-209ENSMUST00000196908 Synj2Q9D2G5 1434 aa14.49□□□□□ -0.09
Pdlim5-209ENSMUST00000196908 Ccdc141E9Q8Q6 1531 aa14.47□□□□□ -0.09
Pdlim5-209ENSMUST00000196908 Adamtsl3G3UXC7 1706 aa14.45□□□□□ -0.1
Pdlim5-209ENSMUST00000196908 Pip4k2bQ80XI4 416 aa14.45□□□□□ -0.1
Pdlim5-209ENSMUST00000196908 Map3k1P53349 1493 aa14.44□□□□□ -0.1
Pdlim5-209ENSMUST00000196908 Ms4a5Q810P8 197 aa14.44□□□□□ -0.1
Pdlim5-209ENSMUST00000196908 Kif7B7ZNG0 1348 aa14.42□□□□□ -0.1
Pdlim5-209ENSMUST00000196908 Abca8bQ8K440 1620 aa14.42□□□□□ -0.1
Pdlim5-209ENSMUST00000196908 Mlh3A0A1Y7VMP7 1443 aa14.4□□□□□ -0.1
Pdlim5-209ENSMUST00000196908 Scn4aQ9ER60 1841 aa14.39□□□□□ -0.11
Pdlim5-209ENSMUST00000196908 Pitpnm1O35954 1243 aa14.39□□□□□ -0.11
Pdlim5-209ENSMUST00000196908 NpatQ8BMA5 1420 aa14.38□□□□□ -0.11
Pdlim5-209ENSMUST00000196908 Polr1aO35134 1717 aaKnown RBP14.38□□□□□ -0.11
Pdlim5-209ENSMUST00000196908 Gcc2Q8CHG3 1679 aa14.37□□□□□ -0.11
Pdlim5-209ENSMUST00000196908 OvosQ3UU35 1456 aa14.37□□□□□ -0.11
Pdlim5-209ENSMUST00000196908 Atp10aO54827 1508 aa14.36□□□□□ -0.11
Pdlim5-209ENSMUST00000196908 Fancd2Q80V62 1450 aa14.36□□□□□ -0.11
Pdlim5-209ENSMUST00000196908 Mroh2aD3Z750 1679 aa14.34□□□□□ -0.11
Pdlim5-209ENSMUST00000196908 Dip2aQ8BWT5 1523 aa14.34□□□□□ -0.11
Pdlim5-209ENSMUST00000196908 Yeats2Q3TUF7 1407 aa14.33□□□□□ -0.11
Pdlim5-209ENSMUST00000196908 Supt6hQ62383 1726 aaKnown RBP14.33□□□□□ -0.12
Pdlim5-209ENSMUST00000196908 Kiaa1210E9Q0C6 1637 aa14.33□□□□□ -0.12
Pdlim5-209ENSMUST00000196908 Hspa1lP16627 641 aa14.32□□□□□ -0.12
Pdlim5-209ENSMUST00000196908 Ncapd3Q6ZQK0 1506 aa14.3□□□□□ -0.12
Pdlim5-209ENSMUST00000196908 Kiaa0556Q8C753 1610 aa14.3□□□□□ -0.12
Pdlim5-209ENSMUST00000196908 Abca9Q8K449 1623 aa14.3□□□□□ -0.12
Pdlim5-209ENSMUST00000196908 Trim35Q8C006 501 aa14.29□□□□□ -0.12
Pdlim5-209ENSMUST00000196908 Cux1P53564 1515 aa14.29□□□□□ -0.12
Pdlim5-209ENSMUST00000196908 Ncoa2Q61026 1462 aa14.27□□□□□ -0.12
Pdlim5-209ENSMUST00000196908 Iqsec2Q5DU25 1478 aa14.25□□□□□ -0.13
Pdlim5-209ENSMUST00000196908 Ptch1Q61115 1434 aa14.25□□□□□ -0.13
Pdlim5-209ENSMUST00000196908 4930407I10RikD3Z5T8 1512 aa14.24□□□□□ -0.13
Pdlim5-209ENSMUST00000196908 Fyco1Q8VDC1 1437 aa14.24□□□□□ -0.13
Pdlim5-209ENSMUST00000196908 Lemd3Q9WU40 921 aa14.23□□□□□ -0.13
Pdlim5-209ENSMUST00000196908 BlmO88700 1416 aa14.22□□□□□ -0.13
Pdlim5-209ENSMUST00000196908 Zmym4A2A791 1549 aaKnown RBP14.21□□□□□ -0.13
Pdlim5-209ENSMUST00000196908 Ltbp4Q8K4G1 1666 aa14.21□□□□□ -0.13
Pdlim5-209ENSMUST00000196908 Magi1Q6RHR9 1471 aa14.21□□□□□ -0.13
Pdlim5-209ENSMUST00000196908 Arhgap35Q91YM2 1499 aa14.21□□□□□ -0.13
Pdlim5-209ENSMUST00000196908 Ankrd26Q811D2 1581 aa14.2□□□□□ -0.14
Pdlim5-209ENSMUST00000196908 Arap1Q4LDD4 1452 aa14.19□□□□□ -0.14
Pdlim5-209ENSMUST00000196908 Rapgef6Q5NCJ1 1609 aa14.19□□□□□ -0.14
Pdlim5-209ENSMUST00000196908 Dip2cE9PWR4 1557 aa14.18□□□□□ -0.14
Pdlim5-209ENSMUST00000196908 Prex2Q3LAC4 1598 aa14.18□□□□□ -0.14
Pdlim5-209ENSMUST00000196908 Ncoa1P70365 1447 aa14.18□□□□□ -0.14
Pdlim5-209ENSMUST00000196908 Clip1Q922J3 1391 aa14.18□□□□□ -0.14
Pdlim5-209ENSMUST00000196908 Talpid3E9PV87 1520 aa14.17□□□□□ -0.14
Pdlim5-209ENSMUST00000196908 Topaz1E5FYH1 1653 aa14.17□□□□□ -0.14
Pdlim5-209ENSMUST00000196908 Fbln2P37889 1221 aa14.15□□□□□ -0.14
Pdlim5-209ENSMUST00000196908 Abca6Q8K441 1624 aa14.15□□□□□ -0.14
Pdlim5-209ENSMUST00000196908 Kif27Q7M6Z4 1394 aa14.14□□□□□ -0.15
Pdlim5-209ENSMUST00000196908 Bcl11bQ99PV8 884 aa14.14□□□□□ -0.15
Pdlim5-209ENSMUST00000196908 Myom2Q14BI5 1463 aa14.13□□□□□ -0.15
Pdlim5-209ENSMUST00000196908 Dennd4bQ3U1Y4 1499 aa14.13□□□□□ -0.15
Pdlim5-209ENSMUST00000196908 Afap1Q80YS6 731 aa14.13□□□□□ -0.15
Pdlim5-209ENSMUST00000196908 RereQ80TZ9 1558 aa14.13□□□□□ -0.15
Pdlim5-209ENSMUST00000196908 Cul9Q80TT8 1865 aa14.12□□□□□ -0.15
Pdlim5-209ENSMUST00000196908 Arhgef40Q3UPH7 1517 aa14.11□□□□□ -0.15
Pdlim5-209ENSMUST00000196908 Cfap65Q3V0B4 1847 aa14.09□□□□□ -0.15
Pdlim5-209ENSMUST00000196908 Aebp1Q640N1 1128 aa14.09□□□□□ -0.15
Pdlim5-209ENSMUST00000196908 Gemin5Q8BX17 1502 aaKnown RBP14.08□□□□□ -0.16
Pdlim5-209ENSMUST00000196908 Dip2bQ3UH60 1574 aa14.07□□□□□ -0.16
Pdlim5-209ENSMUST00000196908 Kdm5cP41230 1554 aa14.06□□□□□ -0.16
Pdlim5-209ENSMUST00000196908 Gli3Q61602 1583 aa14.06□□□□□ -0.16
Pdlim5-209ENSMUST00000196908 Erich3F6QRE9 1637 aa14.05□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 12 ms