RNA–Protein interactions for RNA: ENSMUST00000187274.1

Gm28242-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28242, Length 1,492 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28242-201ENSMUST00000187274 Neurod1Q60867 357 aa10.52□□□□□ -0.73
Gm28242-201ENSMUST00000187274 Prdm16A2A935 1275 aa10.51□□□□□ -0.73
Gm28242-201ENSMUST00000187274 Taok2Q6ZQ29 1240 aa10.51□□□□□ -0.73
Gm28242-201ENSMUST00000187274 Kdm2aP59997 1161 aa10.49□□□□□ -0.73
Gm28242-201ENSMUST00000187274 Onecut3Q8K557 490 aa10.48□□□□□ -0.73
Gm28242-201ENSMUST00000187274 Mkrn3Q60764 544 aa10.47□□□□□ -0.73
Gm28242-201ENSMUST00000187274 Fmr1nbQ80ZA7 238 aa10.47□□□□□ -0.73
Gm28242-201ENSMUST00000187274 Gm11939A2A592 99 aa10.42□□□□□ -0.74
Gm28242-201ENSMUST00000187274 Lhx6Q9R1R0 363 aa10.42□□□□□ -0.74
Gm28242-201ENSMUST00000187274 1700006A11RikB9EHI3 544 aa10.42□□□□□ -0.74
Gm28242-201ENSMUST00000187274 Cnksr2Q80YA9 1032 aa10.41□□□□□ -0.74
Gm28242-201ENSMUST00000187274 Arid3aQ62431 601 aa10.4□□□□□ -0.74
Gm28242-201ENSMUST00000187274 Ano8Q6PB70 1060 aa10.4□□□□□ -0.74
Gm28242-201ENSMUST00000187274 Lrrc14bQ3UJB3 510 aa10.39□□□□□ -0.75
Gm28242-201ENSMUST00000187274 GcgrQ61606 485 aa10.38□□□□□ -0.75
Gm28242-201ENSMUST00000187274 ChgaP26339 463 aaKnown RBP10.37□□□□□ -0.75
Gm28242-201ENSMUST00000187274 Crim1Q9JLL0 1037 aa10.37□□□□□ -0.75
Gm28242-201ENSMUST00000187274 Pbx2O35984 430 aa10.36□□□□□ -0.75
Gm28242-201ENSMUST00000187274 Speer2E9Q9U2 264 aa10.36□□□□□ -0.75
Gm28242-201ENSMUST00000187274 Sycp2Q9CUU3 1500 aa10.35□□□□□ -0.75
Gm28242-201ENSMUST00000187274 Gabbr2Q80T41 940 aa10.33□□□□□ -0.76
Gm28242-201ENSMUST00000187274 Pcdhb20Q91XZ9 799 aa10.33□□□□□ -0.76
Gm28242-201ENSMUST00000187274 Spryd3E9Q9B3 442 aa10.3□□□□□ -0.76
Gm28242-201ENSMUST00000187274 Esf1Q3V1V3 845 aaKnown RBP10.3□□□□□ -0.76
Gm28242-201ENSMUST00000187274 Znf354bQ9QXT9 601 aa10.3□□□□□ -0.76
Gm28242-201ENSMUST00000187274 Klra4Q60651 263 aa10.29□□□□□ -0.76
Gm28242-201ENSMUST00000187274 Dcaf1Q80TR8 1506 aa10.27□□□□□ -0.77
Gm28242-201ENSMUST00000187274 Inpp5dQ9ES52 1191 aa10.26□□□□□ -0.77
Gm28242-201ENSMUST00000187274 IncenpQ9WU62 880 aa10.26□□□□□ -0.77
Gm28242-201ENSMUST00000187274 Myt1Q8CFC2 1127 aa10.25□□□□□ -0.77
Gm28242-201ENSMUST00000187274 Emid1Q91VF5 444 aa10.25□□□□□ -0.77
Gm28242-201ENSMUST00000187274 BicraF8VPZ9 1578 aa10.24□□□□□ -0.77
Gm28242-201ENSMUST00000187274 Skiv2lQ6NZR5 1244 aa10.23□□□□□ -0.77
Gm28242-201ENSMUST00000187274 Pdia6Q922R8 440 aaKnown RBP10.22□□□□□ -0.77
Gm28242-201ENSMUST00000187274 Pdcd7Q9WTY1 482 aa10.22□□□□□ -0.77
Gm28242-201ENSMUST00000187274 Ric3Q8BPM6 367 aa10.21□□□□□ -0.78
Gm28242-201ENSMUST00000187274 Erbb3Q61526 1339 aa10.21□□□□□ -0.78
Gm28242-201ENSMUST00000187274 Ddx11Q6AXC6 880 aa10.2□□□□□ -0.78
Gm28242-201ENSMUST00000187274 Gpr37l1Q99JG2 481 aa10.19□□□□□ -0.78
Gm28242-201ENSMUST00000187274 Gm13695A2AK44 830 aa10.18□□□□□ -0.78
Gm28242-201ENSMUST00000187274 Slc7a3P70423 618 aa10.18□□□□□ -0.78
Gm28242-201ENSMUST00000187274 Eya1P97767 591 aa10.17□□□□□ -0.78
Gm28242-201ENSMUST00000187274 ZyxQ62523 564 aa10.17□□□□□ -0.78
Gm28242-201ENSMUST00000187274 JmyQ9QXM1 983 aa10.16□□□□□ -0.78
Gm28242-201ENSMUST00000187274 Irx6Q9ER75 438 aa10.15□□□□□ -0.78
Gm28242-201ENSMUST00000187274 Ubap1lG3UW59 384 aa10.14□□□□□ -0.79
Gm28242-201ENSMUST00000187274 VaspP70460 375 aaKnown RBP10.14□□□□□ -0.79
Gm28242-201ENSMUST00000187274 Slc12a5Q91V14 1138 aa10.14□□□□□ -0.79
Gm28242-201ENSMUST00000187274 A930017K11RikE0CXQ2 571 aa10.12□□□□□ -0.79
Gm28242-201ENSMUST00000187274 Rb1cc1Q9ESK9 1588 aa10.11□□□□□ -0.79
Gm28242-201ENSMUST00000187274 LipiF6YQT7 476 aa10.1□□□□□ -0.79
Gm28242-201ENSMUST00000187274 Ms4a4cQ9D3F6 226 aa10.1□□□□□ -0.79
Gm28242-201ENSMUST00000187274 Thoc2B1AZI6 1594 aaKnown RBP10.1□□□□□ -0.79
Gm28242-201ENSMUST00000187274 Ffar3Q3UFD7 319 aa10.1□□□□□ -0.79
Gm28242-201ENSMUST00000187274 Rem2Q8VEL9 341 aa10.09□□□□□ -0.79
Gm28242-201ENSMUST00000187274 Saxo1B1AXP3 476 aa10.08□□□□□ -0.8
Gm28242-201ENSMUST00000187274 Masp1P98064 704 aa10.08□□□□□ -0.8
Gm28242-201ENSMUST00000187274 Kctd12Q6WVG3 327 aa10.08□□□□□ -0.8
Gm28242-201ENSMUST00000187274 Ciz1Q8VEH2 845 aa10.06□□□□□ -0.8
Gm28242-201ENSMUST00000187274 Mllt6B1AR10 1109 aa10.05□□□□□ -0.8
Gm28242-201ENSMUST00000187274 Dnajc5gQ8C632 165 aa10.05□□□□□ -0.8
Gm28242-201ENSMUST00000187274 Prrt3Q6PE13 971 aa10.04□□□□□ -0.8
Gm28242-201ENSMUST00000187274 Rhox8Q6VSS7 320 aa10.04□□□□□ -0.8
Gm28242-201ENSMUST00000187274 Lrfn2Q80TG9 788 aa10.03□□□□□ -0.8
Gm28242-201ENSMUST00000187274 Itgbl1Q8VDV0 494 aa10.03□□□□□ -0.8
Gm28242-201ENSMUST00000187274 Hyal3Q8VEI3 412 aa10.03□□□□□ -0.8
Gm28242-201ENSMUST00000187274 E2f4Q8R0K9 410 aa10.02□□□□□ -0.81
Gm28242-201ENSMUST00000187274 Slc24a3Q99PD7 645 aa10.01□□□□□ -0.81
Gm28242-201ENSMUST00000187274 Ufsp1Q9CZP0 217 aa10.01□□□□□ -0.81
Gm28242-201ENSMUST00000187274 Nfxl1E9Q8I7 918 aaKnown RBP9.99□□□□□ -0.81
Gm28242-201ENSMUST00000187274 Pde8bE9Q4S1 865 aa9.98□□□□□ -0.81
Gm28242-201ENSMUST00000187274 Itga6Q61739 1091 aa9.98□□□□□ -0.81
Gm28242-201ENSMUST00000187274 Pds5bQ4VA53 1446 aaKnown RBP9.98□□□□□ -0.81
Gm28242-201ENSMUST00000187274 Fbxo11Q7TPD1 930 aaKnown RBP9.98□□□□□ -0.81
Gm28242-201ENSMUST00000187274 OscarQ8VBT3 265 aa9.97□□□□□ -0.81
Gm28242-201ENSMUST00000187274 Fam221bQ8C627 487 aa9.96□□□□□ -0.82
Gm28242-201ENSMUST00000187274 Bcl11bQ99PV8 884 aa9.95□□□□□ -0.82
Gm28242-201ENSMUST00000187274 Cc2d2aQ8CFW7 1633 aa9.94□□□□□ -0.82
Gm28242-201ENSMUST00000187274 Tpcn2Q8BWC0 731 aa9.94□□□□□ -0.82
Gm28242-201ENSMUST00000187274 Baz1aO88379 1555 aa9.94□□□□□ -0.82
Gm28242-201ENSMUST00000187274 Foxd4Q60688 444 aa9.93□□□□□ -0.82
Gm28242-201ENSMUST00000187274 Krtap3-2Q9D638 99 aa9.93□□□□□ -0.82
Gm28242-201ENSMUST00000187274 Krtap3-3Q9D7P0 99 aa9.93□□□□□ -0.82
Gm28242-201ENSMUST00000187274 Farp1F8VPU2 1048 aa9.92□□□□□ -0.82
Gm28242-201ENSMUST00000187274 Fbxo31Q3TQF0 507 aa9.92□□□□□ -0.82
Gm28242-201ENSMUST00000187274 Tmc3Q7TQ69 1130 aa9.92□□□□□ -0.82
Gm28242-201ENSMUST00000187274 Plekhg3Q4VAC9 1341 aa9.92□□□□□ -0.82
Gm28242-201ENSMUST00000187274 Mre11Q61216 706 aa9.91□□□□□ -0.82
Gm28242-201ENSMUST00000187274 Nudt12Q9DCN1 462 aa9.91□□□□□ -0.82
Gm28242-201ENSMUST00000187274 Apba2P98084 750 aa9.9□□□□□ -0.83
Gm28242-201ENSMUST00000187274 MetrnQ8C1Q4 291 aa9.9□□□□□ -0.83
Gm28242-201ENSMUST00000187274 Cacna1iE9Q7P2 2199 aa9.9□□□□□ -0.83
Gm28242-201ENSMUST00000187274 Zcchc6Q5BLK4 1491 aaKnown RBP9.89□□□□□ -0.83
Gm28242-201ENSMUST00000187274 AaasP58742 546 aa9.88□□□□□ -0.83
Gm28242-201ENSMUST00000187274 Ak7Q9D2H2 614 aa9.88□□□□□ -0.83
Gm28242-201ENSMUST00000187274 Irf6P97431 467 aa9.87□□□□□ -0.83
Gm28242-201ENSMUST00000187274 Ints3Q7TPD0 1041 aaKnown RBP9.87□□□□□ -0.83
Gm28242-201ENSMUST00000187274 RydenQ8CAK3 290 aaKnown RBP9.87□□□□□ -0.83
Gm28242-201ENSMUST00000187274 Slain2Q8CI08 581 aa9.87□□□□□ -0.83
Gm28242-201ENSMUST00000187274 Unc5aQ8K1S4 898 aa9.87□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 67.4 ms