RNA–Protein interactions for RNA: ENSMUST00000185852.6

Msh3-202, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Msh3, Length 3,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-202ENSMUST00000185852 Plekhh2Q8C115 1491 aa14.5□□□□□ -0.09
Msh3-202ENSMUST00000185852 CadpsQ80TJ1 1355 aa14.5□□□□□ -0.09
Msh3-202ENSMUST00000185852 Senp3Q9EP97 568 aaKnown RBP14.49□□□□□ -0.09
Msh3-202ENSMUST00000185852 Gm7298A0A0N4SVU1 1476 aa14.49□□□□□ -0.09
Msh3-202ENSMUST00000185852 AqrQ8CFQ3 1481 aaKnown RBP14.49□□□□□ -0.09
Msh3-202ENSMUST00000185852 Map3k5O35099 1380 aa14.49□□□□□ -0.09
Msh3-202ENSMUST00000185852 Plin1Q8CGN5 517 aa14.49□□□□□ -0.09
Msh3-202ENSMUST00000185852 Hdac5Q9Z2V6 1113 aa14.48□□□□□ -0.09
Msh3-202ENSMUST00000185852 Fan1Q69ZT1 1020 aa14.47□□□□□ -0.09
Msh3-202ENSMUST00000185852 EprsQ8CGC7 1512 aaKnown RBP14.47□□□□□ -0.09
Msh3-202ENSMUST00000185852 SafbD3YXK2 937 aaKnown RBP14.46□□□□□ -0.09
Msh3-202ENSMUST00000185852 IqubQ8CDK3 788 aa14.46□□□□□ -0.1
Msh3-202ENSMUST00000185852 Arid4bA2CG63 1314 aaKnown RBP14.45□□□□□ -0.1
Msh3-202ENSMUST00000185852 Calr4Q3TQS0 420 aa14.45□□□□□ -0.1
Msh3-202ENSMUST00000185852 Usp47Q8BY87 1376 aa14.45□□□□□ -0.1
Msh3-202ENSMUST00000185852 Exoc6Q8R313 802 aa14.45□□□□□ -0.1
Msh3-202ENSMUST00000185852 Ofd1Q80Z25 1017 aa14.44□□□□□ -0.1
Msh3-202ENSMUST00000185852 Ppp4r2Q0VGB7 417 aa14.43□□□□□ -0.1
Msh3-202ENSMUST00000185852 1700123L14RikQ3V2K7 440 aa14.42□□□□□ -0.1
Msh3-202ENSMUST00000185852 Sox12Q04890 314 aa14.41□□□□□ -0.1
Msh3-202ENSMUST00000185852 Spag9Q58A65 1321 aaKnown RBP14.41□□□□□ -0.1
Msh3-202ENSMUST00000185852 Lamc3Q9R0B6 1581 aa14.41□□□□□ -0.1
Msh3-202ENSMUST00000185852 Txndc2Q6P902 515 aa14.41□□□□□ -0.1
Msh3-202ENSMUST00000185852 Cux1P53564 1515 aa14.41□□□□□ -0.1
Msh3-202ENSMUST00000185852 Myt1Q8CFC2 1127 aa14.39□□□□□ -0.11
Msh3-202ENSMUST00000185852 Dhx57Q6P5D3 1388 aaKnown RBP14.39□□□□□ -0.11
Msh3-202ENSMUST00000185852 Fgd6Q69ZL1 1399 aa14.38□□□□□ -0.11
Msh3-202ENSMUST00000185852 Arhgef5E9Q7D5 1581 aa14.38□□□□□ -0.11
Msh3-202ENSMUST00000185852 Neo1P97798 1493 aa14.37□□□□□ -0.11
Msh3-202ENSMUST00000185852 Cwc22Q8C5N3 908 aaKnown RBP14.37□□□□□ -0.11
Msh3-202ENSMUST00000185852 Crocc2F6XLV1 1638 aa14.36□□□□□ -0.11
Msh3-202ENSMUST00000185852 Slc4a1apE9PX68 744 aa14.35□□□□□ -0.11
Msh3-202ENSMUST00000185852 Gtf2e1Q9D0D5 440 aa14.35□□□□□ -0.11
Msh3-202ENSMUST00000185852 Srcin1Q9QWI6 1250 aa14.35□□□□□ -0.11
Msh3-202ENSMUST00000185852 1700019A02RikA0A087WPV9 146 aa14.35□□□□□ -0.11
Msh3-202ENSMUST00000185852 Grin2aP35436 1464 aa14.34□□□□□ -0.11
Msh3-202ENSMUST00000185852 Slc4a3P16283 1227 aa14.34□□□□□ -0.11
Msh3-202ENSMUST00000185852 Dcaf11Q91VU6 549 aa14.34□□□□□ -0.11
Msh3-202ENSMUST00000185852 Pde4cQ3UEI1 686 aa14.32□□□□□ -0.12
Msh3-202ENSMUST00000185852 Dhx9O70133 1380 aaKnown RBP14.32□□□□□ -0.12
Msh3-202ENSMUST00000185852 Psme1P97371 249 aa14.32□□□□□ -0.12
Msh3-202ENSMUST00000185852 Ttll5Q8CHB8 1328 aa14.31□□□□□ -0.12
Msh3-202ENSMUST00000185852 UacaQ8CGB3 1411 aa14.31□□□□□ -0.12
Msh3-202ENSMUST00000185852 Birc3O08863 600 aa14.3□□□□□ -0.12
Msh3-202ENSMUST00000185852 Map3k1P53349 1493 aa14.3□□□□□ -0.12
Msh3-202ENSMUST00000185852 Utp14aQ640M1 767 aaKnown RBP14.3□□□□□ -0.12
Msh3-202ENSMUST00000185852 Gm14025A2AP89 1413 aa14.29□□□□□ -0.12
Msh3-202ENSMUST00000185852 Ncapd3Q6ZQK0 1506 aa14.28□□□□□ -0.12
Msh3-202ENSMUST00000185852 Ift140E9PY46 1464 aa14.28□□□□□ -0.12
Msh3-202ENSMUST00000185852 Inpp5dQ9ES52 1191 aa14.27□□□□□ -0.12
Msh3-202ENSMUST00000185852 SynmQ70IV5 1561 aa14.27□□□□□ -0.12
Msh3-202ENSMUST00000185852 Shq1Q7TMX5 569 aa14.27□□□□□ -0.13
Msh3-202ENSMUST00000185852 Pcf11G3X9Z4 1553 aa14.26□□□□□ -0.13
Msh3-202ENSMUST00000185852 Tcerg1Q8CGF7 1100 aaKnown RBP14.25□□□□□ -0.13
Msh3-202ENSMUST00000185852 Pank3Q8R2W9 370 aa14.25□□□□□ -0.13
Msh3-202ENSMUST00000185852 Mink1Q9JM52 1308 aa14.25□□□□□ -0.13
Msh3-202ENSMUST00000185852 Armcx1Q9CX83 456 aa14.25□□□□□ -0.13
Msh3-202ENSMUST00000185852 Afap1Q80YS6 731 aa14.24□□□□□ -0.13
Msh3-202ENSMUST00000185852 Rock2P70336 1388 aa14.24□□□□□ -0.13
Msh3-202ENSMUST00000185852 Gm6268A2A3U9 297 aa14.24□□□□□ -0.13
Msh3-202ENSMUST00000185852 Tiam1Q60610 1591 aa14.24□□□□□ -0.13
Msh3-202ENSMUST00000185852 Usp40Q8BWR4 1235 aa14.23□□□□□ -0.13
Msh3-202ENSMUST00000185852 PxdnQ3UQ28 1475 aa14.23□□□□□ -0.13
Msh3-202ENSMUST00000185852 Anp32aO35381 247 aa14.23□□□□□ -0.13
Msh3-202ENSMUST00000185852 Arhgap5P97393 1501 aa14.23□□□□□ -0.13
Msh3-202ENSMUST00000185852 Sall3Q62255 1320 aa14.23□□□□□ -0.13
Msh3-202ENSMUST00000185852 Polr1aO35134 1717 aaKnown RBP14.22□□□□□ -0.13
Msh3-202ENSMUST00000185852 Ncoa2Q61026 1462 aa14.22□□□□□ -0.13
Msh3-202ENSMUST00000185852 Dbr1Q923B1 550 aa14.22□□□□□ -0.13
Msh3-202ENSMUST00000185852 Fhad1A6PWD2 1420 aa14.21□□□□□ -0.13
Msh3-202ENSMUST00000185852 CrbnQ8C7D2 445 aa14.21□□□□□ -0.13
Msh3-202ENSMUST00000185852 Wdr43Q6ZQL4 677 aaKnown RBP14.21□□□□□ -0.13
Msh3-202ENSMUST00000185852 Disp1Q3TDN0 1521 aa14.21□□□□□ -0.14
Msh3-202ENSMUST00000185852 DiexfQ8BTT6 772 aaKnown RBP14.21□□□□□ -0.14
Msh3-202ENSMUST00000185852 Samd9lQ69Z37 1561 aa14.2□□□□□ -0.14
Msh3-202ENSMUST00000185852 Mug1P28665 1476 aa14.2□□□□□ -0.14
Msh3-202ENSMUST00000185852 Q9D9H8 365 aa14.2□□□□□ -0.14
Msh3-202ENSMUST00000185852 NexmifQ5DTT1 1515 aa14.19□□□□□ -0.14
Msh3-202ENSMUST00000185852 Dapk1Q80YE7 1442 aa14.19□□□□□ -0.14
Msh3-202ENSMUST00000185852 U2af1Q9D883 239 aaKnown RBP14.19□□□□□ -0.14
Msh3-202ENSMUST00000185852 Fam163aQ8CAA5 168 aa14.18□□□□□ -0.14
Msh3-202ENSMUST00000185852 Speer4f1Q9D5Q6 258 aa14.18□□□□□ -0.14
Msh3-202ENSMUST00000185852 Tmf1B9EKI3 1091 aa14.18□□□□□ -0.14
Msh3-202ENSMUST00000185852 Ccdc141E9Q8Q6 1531 aa14.17□□□□□ -0.14
Msh3-202ENSMUST00000185852 Gpatch8A2A6A1 1505 aa14.17□□□□□ -0.14
Msh3-202ENSMUST00000185852 Pibf1E9Q6K3 756 aa14.16□□□□□ -0.14
Msh3-202ENSMUST00000185852 A2mQ6GQT1 1474 aa14.16□□□□□ -0.14
Msh3-202ENSMUST00000185852 4933416C03RikQ3V063 378 aa14.16□□□□□ -0.14
Msh3-202ENSMUST00000185852 Slx4Q6P1D7 1565 aa14.15□□□□□ -0.14
Msh3-202ENSMUST00000185852 Ncoa3O09000 1398 aa14.15□□□□□ -0.14
Msh3-202ENSMUST00000185852 Ankrd26Q811D2 1581 aa14.15□□□□□ -0.14
Msh3-202ENSMUST00000185852 Mapk8ip3Q9ESN9 1337 aa14.15□□□□□ -0.14
Msh3-202ENSMUST00000185852 Aplp2Q06335 707 aa14.15□□□□□ -0.14
Msh3-202ENSMUST00000185852 3425401B19RikD3Z1D3 1412 aa14.15□□□□□ -0.14
Msh3-202ENSMUST00000185852 Abcc5Q9R1X5 1436 aa14.15□□□□□ -0.14
Msh3-202ENSMUST00000185852 B4galnt3Q6L8S8 986 aa14.14□□□□□ -0.15
Msh3-202ENSMUST00000185852 Zscan21Q07231 555 aa14.14□□□□□ -0.15
Msh3-202ENSMUST00000185852 U2surpQ6NV83 1029 aaKnown RBP14.13□□□□□ -0.15
Msh3-202ENSMUST00000185852 Pip4k2bQ80XI4 416 aa14.13□□□□□ -0.15
Msh3-202ENSMUST00000185852 Rtn4Q99P72 1162 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms