RNA–Protein interactions for RNA: ENSMUST00000168203.1

Ebf3-203, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ebf3, Length 3,724 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-203ENSMUST00000168203 Abca5Q8K448 1642 aa16.81■□□□□ 0.28
Ebf3-203ENSMUST00000168203 Hsp90aa1P07901 733 aaKnown RBP16.81■□□□□ 0.28
Ebf3-203ENSMUST00000168203 Ccdc27Q3V036 639 aa16.8■□□□□ 0.28
Ebf3-203ENSMUST00000168203 Gm13697A2AK42 830 aa16.8■□□□□ 0.28
Ebf3-203ENSMUST00000168203 Lmtk2Q3TYD6 1471 aa16.79■□□□□ 0.28
Ebf3-203ENSMUST00000168203 WizO88286 1684 aaKnown RBP16.79■□□□□ 0.28
Ebf3-203ENSMUST00000168203 NexmifQ5DTT1 1515 aa16.77■□□□□ 0.28
Ebf3-203ENSMUST00000168203 Cabp1Q9JLK7 227 aa16.77■□□□□ 0.27
Ebf3-203ENSMUST00000168203 Adamts12Q811B3 1600 aa16.75■□□□□ 0.27
Ebf3-203ENSMUST00000168203 Mtus2Q3UHD3 1353 aa16.74■□□□□ 0.27
Ebf3-203ENSMUST00000168203 PxdnQ3UQ28 1475 aa16.74■□□□□ 0.27
Ebf3-203ENSMUST00000168203 Mphosph9A6H5Y1 991 aa16.73■□□□□ 0.27
Ebf3-203ENSMUST00000168203 Plekhh2Q8C115 1491 aa16.73■□□□□ 0.27
Ebf3-203ENSMUST00000168203 Zbtb4Q5F293 982 aa16.73■□□□□ 0.27
Ebf3-203ENSMUST00000168203 Cc2d2bA0A286YDU8 1405 aa16.72■□□□□ 0.27
Ebf3-203ENSMUST00000168203 BC005561E9Q5E2 1589 aa16.72■□□□□ 0.27
Ebf3-203ENSMUST00000168203 Irx3P81067 507 aa16.72■□□□□ 0.27
Ebf3-203ENSMUST00000168203 Upf2A2AT37 1269 aaKnown RBP16.71■□□□□ 0.27
Ebf3-203ENSMUST00000168203 Zbtb7cQ8VCZ7 619 aa16.71■□□□□ 0.27
Ebf3-203ENSMUST00000168203 Nup160Q9Z0W3 1402 aaKnown RBP16.71■□□□□ 0.27
Ebf3-203ENSMUST00000168203 Mug1P28665 1476 aa16.7■□□□□ 0.26
Ebf3-203ENSMUST00000168203 Dhx57Q6P5D3 1388 aaKnown RBP16.69■□□□□ 0.26
Ebf3-203ENSMUST00000168203 Rfx7F8VPJ6 1459 aa16.67■□□□□ 0.26
Ebf3-203ENSMUST00000168203 Pbrm1Q8BSQ9 1634 aaKnown RBP16.66■□□□□ 0.26
Ebf3-203ENSMUST00000168203 Sin3aQ60520 1274 aaKnown RBP16.66■□□□□ 0.26
Ebf3-203ENSMUST00000168203 Gcc2Q8CHG3 1679 aa16.65■□□□□ 0.26
Ebf3-203ENSMUST00000168203 Anp32bQ9EST5 272 aaKnown RBP16.65■□□□□ 0.26
Ebf3-203ENSMUST00000168203 Pkd2O35245 966 aa16.64■□□□□ 0.25
Ebf3-203ENSMUST00000168203 Fkbp15Q6P9Q6 1216 aaKnown RBP16.64■□□□□ 0.25
Ebf3-203ENSMUST00000168203 Gtf3c3Q3TMP1 882 aa16.64■□□□□ 0.25
Ebf3-203ENSMUST00000168203 Ncoa3O09000 1398 aa16.64■□□□□ 0.25
Ebf3-203ENSMUST00000168203 Znf710Q3U288 666 aa16.63■□□□□ 0.25
Ebf3-203ENSMUST00000168203 Ncoa2Q61026 1462 aa16.63■□□□□ 0.25
Ebf3-203ENSMUST00000168203 Arhgap31A6X8Z5 1425 aa16.63■□□□□ 0.25
Ebf3-203ENSMUST00000168203 Abcc5Q9R1X5 1436 aa16.63■□□□□ 0.25
Ebf3-203ENSMUST00000168203 Rapgef6Q5NCJ1 1609 aa16.62■□□□□ 0.25
Ebf3-203ENSMUST00000168203 Plcd4Q8K3R3 807 aa16.62■□□□□ 0.25
Ebf3-203ENSMUST00000168203 Wwc2Q6NXJ0 1187 aa16.6■□□□□ 0.25
Ebf3-203ENSMUST00000168203 Pak3Q61036 559 aa16.6■□□□□ 0.25
Ebf3-203ENSMUST00000168203 Naip5Q9R016 1403 aa16.6■□□□□ 0.25
Ebf3-203ENSMUST00000168203 Shroom2A2ALU4 1481 aa16.6■□□□□ 0.25
Ebf3-203ENSMUST00000168203 Abca16E9PWJ7 1678 aa16.59■□□□□ 0.25
Ebf3-203ENSMUST00000168203 Camsap2Q8C1B1 1461 aa16.59■□□□□ 0.25
Ebf3-203ENSMUST00000168203 Rad21Q61550 635 aaKnown RBP16.58■□□□□ 0.25
Ebf3-203ENSMUST00000168203 CanxP35564 591 aaKnown RBP16.57■□□□□ 0.24
Ebf3-203ENSMUST00000168203 Fam163aQ8CAA5 168 aa16.57■□□□□ 0.24
Ebf3-203ENSMUST00000168203 Ccdc9Q8VC31 543 aaKnown RBP16.57■□□□□ 0.24
Ebf3-203ENSMUST00000168203 Usp47Q8BY87 1376 aa16.56■□□□□ 0.24
Ebf3-203ENSMUST00000168203 Il16O54824 1322 aa16.56■□□□□ 0.24
Ebf3-203ENSMUST00000168203 Dennd4bQ3U1Y4 1499 aa16.55■□□□□ 0.24
Ebf3-203ENSMUST00000168203 Zfp644E9QA22 1323 aa16.55■□□□□ 0.24
Ebf3-203ENSMUST00000168203 Ccdc141E9Q8Q6 1531 aa16.54■□□□□ 0.24
Ebf3-203ENSMUST00000168203 Magi1Q6RHR9 1471 aa16.54■□□□□ 0.24
Ebf3-203ENSMUST00000168203 Jph4Q80WT0 628 aa16.53■□□□□ 0.24
Ebf3-203ENSMUST00000168203 Fhod3Q76LL6 1578 aa16.53■□□□□ 0.24
Ebf3-203ENSMUST00000168203 AknaQ80VW7 1404 aa16.52■□□□□ 0.24
Ebf3-203ENSMUST00000168203 Ofd1Q80Z25 1017 aa16.52■□□□□ 0.24
Ebf3-203ENSMUST00000168203 Lrriq1Q0P5X1 1673 aa16.52■□□□□ 0.23
Ebf3-203ENSMUST00000168203 Arhgef40Q3UPH7 1517 aa16.51■□□□□ 0.23
Ebf3-203ENSMUST00000168203 Tdrd9Q14BI7 1383 aa16.5■□□□□ 0.23
Ebf3-203ENSMUST00000168203 Arhgef11Q68FM7 1552 aa16.49■□□□□ 0.23
Ebf3-203ENSMUST00000168203 ChgaP26339 463 aaKnown RBP16.49■□□□□ 0.23
Ebf3-203ENSMUST00000168203 Abcc2Q8VI47 1543 aa16.49■□□□□ 0.23
Ebf3-203ENSMUST00000168203 Setd1bQ8CFT2 1985 aa16.48■□□□□ 0.23
Ebf3-203ENSMUST00000168203 Cul7Q8VE73 1689 aa16.48■□□□□ 0.23
Ebf3-203ENSMUST00000168203 Rgl3Q3UYI5 709 aa16.48■□□□□ 0.23
Ebf3-203ENSMUST00000168203 Pknox2Q8BG99 474 aa16.48■□□□□ 0.23
Ebf3-203ENSMUST00000168203 Adcy10Q8C0T9 1614 aa16.47■□□□□ 0.23
Ebf3-203ENSMUST00000168203 Taok2Q6ZQ29 1240 aa16.47■□□□□ 0.23
Ebf3-203ENSMUST00000168203 Clstn2Q9ER65 966 aa16.46■□□□□ 0.23
Ebf3-203ENSMUST00000168203 Rprd2Q6NXI6 1469 aaKnown RBP16.46■□□□□ 0.23
Ebf3-203ENSMUST00000168203 Smg6P61406 1418 aaKnown RBP16.46■□□□□ 0.23
Ebf3-203ENSMUST00000168203 Trak1Q6PD31 939 aa16.45■□□□□ 0.22
Ebf3-203ENSMUST00000168203 Mlh3A0A1Y7VMP7 1443 aa16.45■□□□□ 0.22
Ebf3-203ENSMUST00000168203 Neo1P97798 1493 aa16.44■□□□□ 0.22
Ebf3-203ENSMUST00000168203 Kiaa1551Q5DTW7 1521 aa16.44■□□□□ 0.22
Ebf3-203ENSMUST00000168203 Spryd3E9Q9B3 442 aa16.44■□□□□ 0.22
Ebf3-203ENSMUST00000168203 Nup155Q99P88 1391 aaKnown RBP16.44■□□□□ 0.22
Ebf3-203ENSMUST00000168203 B4galnt3Q6L8S8 986 aa16.43■□□□□ 0.22
Ebf3-203ENSMUST00000168203 Fgd6Q69ZL1 1399 aa16.43■□□□□ 0.22
Ebf3-203ENSMUST00000168203 Kdm3bQ6ZPY7 1562 aa16.43■□□□□ 0.22
Ebf3-203ENSMUST00000168203 Map4P27546 1125 aaKnown RBP16.43■□□□□ 0.22
Ebf3-203ENSMUST00000168203 Dbr1Q923B1 550 aa16.43■□□□□ 0.22
Ebf3-203ENSMUST00000168203 Rusc2Q80U22 1514 aa16.43■□□□□ 0.22
Ebf3-203ENSMUST00000168203 Cwc22Q8C5N3 908 aaKnown RBP16.42■□□□□ 0.22
Ebf3-203ENSMUST00000168203 Caskin1Q6P9K8 1431 aa16.42■□□□□ 0.22
Ebf3-203ENSMUST00000168203 Mapkbp1Q6NS57 1503 aa16.41■□□□□ 0.22
Ebf3-203ENSMUST00000168203 Ipo9Q91YE6 1041 aa16.41■□□□□ 0.22
Ebf3-203ENSMUST00000168203 Prex2Q3LAC4 1598 aa16.4■□□□□ 0.22
Ebf3-203ENSMUST00000168203 Pik3c2gO70167 1506 aa16.39■□□□□ 0.22
Ebf3-203ENSMUST00000168203 Rrp7aQ9D1C9 280 aaKnown RBP16.39■□□□□ 0.21
Ebf3-203ENSMUST00000168203 Cdc42bpaQ3UU96 1719 aa16.39■□□□□ 0.21
Ebf3-203ENSMUST00000168203 Kdm6bQ5NCY0 1641 aa16.39■□□□□ 0.21
Ebf3-203ENSMUST00000168203 Setbp1Q9Z180 1582 aa16.39■□□□□ 0.21
Ebf3-203ENSMUST00000168203 Ttll5Q8CHB8 1328 aa16.38■□□□□ 0.21
Ebf3-203ENSMUST00000168203 Map3k4O08648 1597 aa16.38■□□□□ 0.21
Ebf3-203ENSMUST00000168203 Adgrb2Q8CGM1 1561 aa16.38■□□□□ 0.21
Ebf3-203ENSMUST00000168203 Tcerg1Q8CGF7 1100 aaKnown RBP16.37■□□□□ 0.21
Ebf3-203ENSMUST00000168203 Exoc6Q8R313 802 aa16.37■□□□□ 0.21
Ebf3-203ENSMUST00000168203 Prdm10Q3UTQ7 1184 aa16.36■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 35 ms