RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 Pdlim2Q8R1G6 349 aa10.01□□□□□ -0.81
Bdnf-209ENSMUST00000111050 Pprc1Q6NZN1 1644 aa10.01□□□□□ -0.81
Bdnf-209ENSMUST00000111050 ArxO35085 564 aa10.01□□□□□ -0.81
Bdnf-209ENSMUST00000111050 Gtf3c5Q8R2T8 520 aa10□□□□□ -0.81
Bdnf-209ENSMUST00000111050 IbspQ61711 324 aa10□□□□□ -0.81
Bdnf-209ENSMUST00000111050 Vps8Q0P5W1 1427 aa10□□□□□ -0.81
Bdnf-209ENSMUST00000111050 NudcO35685 332 aaKnown RBP9.99□□□□□ -0.81
Bdnf-209ENSMUST00000111050 Chic2Q9D9G3 165 aa9.99□□□□□ -0.81
Bdnf-209ENSMUST00000111050 Ppm1gQ61074 542 aa9.98□□□□□ -0.81
Bdnf-209ENSMUST00000111050 Paxip1Q6NZQ4 1056 aa9.98□□□□□ -0.81
Bdnf-209ENSMUST00000111050 Slx4Q6P1D7 1565 aa9.98□□□□□ -0.81
Bdnf-209ENSMUST00000111050 Eif2s2Q99L45 331 aaKnown RBP9.98□□□□□ -0.81
Bdnf-209ENSMUST00000111050 Kank1E9Q238 1360 aa9.98□□□□□ -0.81
Bdnf-209ENSMUST00000111050 Rad21Q61550 635 aaKnown RBP9.98□□□□□ -0.81
Bdnf-209ENSMUST00000111050 Mink1Q9JM52 1308 aa9.97□□□□□ -0.81
Bdnf-209ENSMUST00000111050 Zfp91Q62511 572 aa9.95□□□□□ -0.82
Bdnf-209ENSMUST00000111050 BccipQ9CWI3 316 aa9.94□□□□□ -0.82
Bdnf-209ENSMUST00000111050 Phf14Q9D4H9 881 aa9.94□□□□□ -0.82
Bdnf-209ENSMUST00000111050 Zfp444Q3TDV8 331 aaKnown RBP9.94□□□□□ -0.82
Bdnf-209ENSMUST00000111050 Efcab5A0JP43 1406 aa9.94□□□□□ -0.82
Bdnf-209ENSMUST00000111050 Rbm10Q99KG3 930 aaKnown RBP9.93□□□□□ -0.82
Bdnf-209ENSMUST00000111050 EspnQ9ET47 871 aa9.93□□□□□ -0.82
Bdnf-209ENSMUST00000111050 Thoc2B1AZI6 1594 aaKnown RBP9.93□□□□□ -0.82
Bdnf-209ENSMUST00000111050 Chmp5Q9D7S9 219 aa9.92□□□□□ -0.82
Bdnf-209ENSMUST00000111050 Naip2Q9QUK4 1447 aa9.92□□□□□ -0.82
Bdnf-209ENSMUST00000111050 NrkQ9R0G8 1455 aa9.92□□□□□ -0.82
Bdnf-209ENSMUST00000111050 Scaf1Q5U4C3 1256 aaKnown RBP9.92□□□□□ -0.82
Bdnf-209ENSMUST00000111050 Gm6268A2A3U9 297 aa9.92□□□□□ -0.82
Bdnf-209ENSMUST00000111050 Hsp90ab1P11499 724 aaKnown RBP9.92□□□□□ -0.82
Bdnf-209ENSMUST00000111050 Trim30dE9PWL0 497 aa9.91□□□□□ -0.82
Bdnf-209ENSMUST00000111050 Dhx57Q6P5D3 1388 aaKnown RBP9.91□□□□□ -0.82
Bdnf-209ENSMUST00000111050 Pcf11G3X9Z4 1553 aa9.91□□□□□ -0.82
Bdnf-209ENSMUST00000111050 4930567H17RikQ3V0K5 233 aa9.9□□□□□ -0.82
Bdnf-209ENSMUST00000111050 TnikP83510 1323 aa9.9□□□□□ -0.82
Bdnf-209ENSMUST00000111050 Kif20aP97329 887 aa9.9□□□□□ -0.82
Bdnf-209ENSMUST00000111050 Crocc2F6XLV1 1638 aa9.9□□□□□ -0.82
Bdnf-209ENSMUST00000111050 Mphosph9A6H5Y1 991 aa9.9□□□□□ -0.83
Bdnf-209ENSMUST00000111050 Htatsf1Q8BGC0 757 aa9.9□□□□□ -0.83
Bdnf-209ENSMUST00000111050 Plppr3Q7TPB0 716 aa9.89□□□□□ -0.83
Bdnf-209ENSMUST00000111050 Dusp27Q148W8 1138 aa9.89□□□□□ -0.83
Bdnf-209ENSMUST00000111050 Znf316Q6PGE4 1016 aa9.89□□□□□ -0.83
Bdnf-209ENSMUST00000111050 Ak7Q9D2H2 614 aa9.89□□□□□ -0.83
Bdnf-209ENSMUST00000111050 Vgll3P85442 326 aa9.88□□□□□ -0.83
Bdnf-209ENSMUST00000111050 PogkQ80TC5 607 aa9.88□□□□□ -0.83
Bdnf-209ENSMUST00000111050 Ankrd26Q811D2 1581 aa9.87□□□□□ -0.83
Bdnf-209ENSMUST00000111050 Usp47Q8BY87 1376 aa9.87□□□□□ -0.83
Bdnf-209ENSMUST00000111050 Irf5P56477 497 aa9.87□□□□□ -0.83
Bdnf-209ENSMUST00000111050 Rpgrip1lQ8CG73 1264 aa9.87□□□□□ -0.83
Bdnf-209ENSMUST00000111050 Rrp12Q6P5B0 1295 aaKnown RBP9.86□□□□□ -0.83
Bdnf-209ENSMUST00000111050 Dennd4bQ3U1Y4 1499 aa9.86□□□□□ -0.83
Bdnf-209ENSMUST00000111050 Ipo8Q7TMY7 1010 aa9.86□□□□□ -0.83
Bdnf-209ENSMUST00000111050 Apbb1Q9QXJ1 710 aa9.86□□□□□ -0.83
Bdnf-209ENSMUST00000111050 Cul7Q8VE73 1689 aa9.86□□□□□ -0.83
Bdnf-209ENSMUST00000111050 Kdm2bQ6P1G2 1309 aa9.86□□□□□ -0.83
Bdnf-209ENSMUST00000111050 Il4rP16382 810 aa9.85□□□□□ -0.83
Bdnf-209ENSMUST00000111050 Mak16Q8BGS0 296 aaKnown RBP9.85□□□□□ -0.83
Bdnf-209ENSMUST00000111050 Disp1Q3TDN0 1521 aa9.85□□□□□ -0.83
Bdnf-209ENSMUST00000111050 Ppp1r9bQ6R891 817 aaKnown RBP9.85□□□□□ -0.83
Bdnf-209ENSMUST00000111050 Stard8Q8K031 1019 aa9.85□□□□□ -0.83
Bdnf-209ENSMUST00000111050 A2mQ6GQT1 1474 aa9.85□□□□□ -0.83
Bdnf-209ENSMUST00000111050 Pkd2O35245 966 aa9.84□□□□□ -0.83
Bdnf-209ENSMUST00000111050 Ak9G3UYQ4 1894 aa9.84□□□□□ -0.83
Bdnf-209ENSMUST00000111050 Plekhg5Q66T02 1073 aa9.84□□□□□ -0.83
Bdnf-209ENSMUST00000111050 Erich3F6QRE9 1637 aa9.84□□□□□ -0.83
Bdnf-209ENSMUST00000111050 Map3k1P53349 1493 aa9.84□□□□□ -0.83
Bdnf-209ENSMUST00000111050 BicraF8VPZ9 1578 aa9.84□□□□□ -0.83
Bdnf-209ENSMUST00000111050 Tex2Q6ZPJ0 1128 aaKnown RBP9.84□□□□□ -0.83
Bdnf-209ENSMUST00000111050 Gm7298A0A0N4SVU1 1476 aa9.83□□□□□ -0.84
Bdnf-209ENSMUST00000111050 4933402E13RikQ9D4D2 429 aa9.83□□□□□ -0.84
Bdnf-209ENSMUST00000111050 Zscan21Q07231 555 aa9.82□□□□□ -0.84
Bdnf-209ENSMUST00000111050 Q7TT23 1179 aa9.82□□□□□ -0.84
Bdnf-209ENSMUST00000111050 Cwc22Q8C5N3 908 aaKnown RBP9.82□□□□□ -0.84
Bdnf-209ENSMUST00000111050 Mbd3Q9Z2D8 285 aaKnown RBP9.82□□□□□ -0.84
Bdnf-209ENSMUST00000111050 Myom3A2ABU4 1439 aa9.82□□□□□ -0.84
Bdnf-209ENSMUST00000111050 Shroom4Q1W617 1475 aa9.81□□□□□ -0.84
Bdnf-209ENSMUST00000111050 Rundc1Q0VDN7 615 aa9.81□□□□□ -0.84
Bdnf-209ENSMUST00000111050 TimelessQ9R1X4 1197 aa9.81□□□□□ -0.84
Bdnf-209ENSMUST00000111050 Ccdc183A2AJB1 534 aa9.8□□□□□ -0.84
Bdnf-209ENSMUST00000111050 Rgl3Q3UYI5 709 aa9.8□□□□□ -0.84
Bdnf-209ENSMUST00000111050 Smc5Q8CG46 1101 aaKnown RBP9.8□□□□□ -0.84
Bdnf-209ENSMUST00000111050 Dcaf11Q91VU6 549 aa9.8□□□□□ -0.84
Bdnf-209ENSMUST00000111050 Zfp644E9QA22 1323 aa9.79□□□□□ -0.84
Bdnf-209ENSMUST00000111050 Dhx30Q99PU8 1217 aaKnown RBP9.79□□□□□ -0.84
Bdnf-209ENSMUST00000111050 SlkO54988 1233 aa9.79□□□□□ -0.84
Bdnf-209ENSMUST00000111050 Pdia4P08003 638 aaKnown RBP9.79□□□□□ -0.84
Bdnf-209ENSMUST00000111050 Mcm4P49717 862 aa9.79□□□□□ -0.84
Bdnf-209ENSMUST00000111050 Phf23Q8BSN5 401 aa9.79□□□□□ -0.84
Bdnf-209ENSMUST00000111050 Trim44Q9QXA7 346 aa9.79□□□□□ -0.84
Bdnf-209ENSMUST00000111050 Rock2P70336 1388 aa9.79□□□□□ -0.84
Bdnf-209ENSMUST00000111050 Nom1Q3UFM5 854 aaKnown RBP9.78□□□□□ -0.84
Bdnf-209ENSMUST00000111050 Dapk1Q80YE7 1442 aa9.77□□□□□ -0.84
Bdnf-209ENSMUST00000111050 Tpm2P58774 284 aa9.77□□□□□ -0.84
Bdnf-209ENSMUST00000111050 Card11Q8CIS0 1159 aa9.77□□□□□ -0.84
Bdnf-209ENSMUST00000111050 Rwdd1Q9CQK7 243 aa9.77□□□□□ -0.84
Bdnf-209ENSMUST00000111050 Rprd2Q6NXI6 1469 aaKnown RBP9.77□□□□□ -0.85
Bdnf-209ENSMUST00000111050 Trim26Q99PN3 545 aa9.77□□□□□ -0.85
Bdnf-209ENSMUST00000111050 Antxr1Q9CZ52 562 aa9.77□□□□□ -0.85
Bdnf-209ENSMUST00000111050 Clcn1Q64347 994 aa9.76□□□□□ -0.85
Bdnf-209ENSMUST00000111050 CrbnQ8C7D2 445 aa9.76□□□□□ -0.85
Bdnf-209ENSMUST00000111050 Lmo7E9PYF4 1699 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 35.6 ms